New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1096638 =51 (0.850)4 (0.070) 4/230 NT 7.9% coding (329/726 nt) lptB ABC transporter ATP‑binding protein
?NC_002947 1096660 = 44 (0.770)coding (307/726 nt) lptB ABC transporter ATP‑binding protein

GATGAACTTGGGTGCGGTCGCCAGGGCGCGCGCAATTTCGACGCGGCGGCGTTCACCACCAGACAGGCTCATGCCGAGGTTGTCCCGGATGTGGCTGATGTGGAACTCCTGCAGCAGGCTTTCCAGCTCTTTGCGGCGGCCGTCCCGATCGAGGTCCTTGCGGGTCTCGAGGATGGCCATGATGTTGTCGGCGACCGACAGCTTGCGGAAGATCGAGGCTTCCTGCGGCAGGTAGCCGATTCCGGCACGGGCGCGGCCGTGCATGGGCTGGTGGCTGACATCGAGGTTGTC  >  NC_002947/1096490‑1096780
                                                                                                                                                    |                                                                                                                                              
gATGAACTTGGGTGCGGTCGCCAGGGCGCGCGCACTTTCGACGCGGCGGCGTTCACCACCAGACAGGCTCATGCCGAGGTTGTCCCGGATGTGGCTGATGTGGAACTCCTGCAGCAGGCTTTCCAGCTCTTTGCGGCGGCCGTCCCGATc                                                                                                                                               >  1:949514/1‑150 (MQ=255)
   gAACTTGGGTGAGGTCGCCAGGGCGCGCGCAATTTCGACGCGGCGGCGTTTACCACCAGACCGGCTTATGCCGAGGTTGTACCGGATGTGGCTCATGCGGAACTCCTGCAGCAGGCTGTCCAGCTCTTTGCGGCGGCCGTCCCGATCGAg                                                                                                                                            <  1:40127/150‑1 (MQ=255)
       ttGGGTGCGGTCGCCAGGGCGCGCGCAATTTCGACGCGGCGGCGTTCACCACCAGACAGGCTCATGCCGAGGTTGTCCCGGATGTGGCTGATGTGGAACTCCTGCAGCAGGCTTTCCAGCTCTTTGCGGCGGCCGTCCCGATCGAGGTcc                                                                                                                                        >  2:1379216/1‑150 (MQ=255)
       ttGGGTGCGGTCGCCAGGGCGCGCGCAATTTCGACGCGGCGGCGTTCACCACCAGACAGGCTCATGCCGAGGTTGTCCCGGATGTGGCTGATGTGGAACTCCTGCAGCAGGCTTTCCAGCTCTTTGCGGCGGCCGTCCCGATCGAGGTcc                                                                                                                                        >  2:320312/1‑150 (MQ=255)
           gTGCGGTCGCCAGGGCGCGCGCAATTTCGACGCGGCGGCGTTCACCACCAGACAGGCTCATGCCGAGGTTGTCCCGGATGTGGCTGATGTGGAACTCCTGCAGCAGGCTTTCCAGCTCTTTGCGGCGGCCGTCCCGATCGAGGTCCTTGc                                                                                                                                    <  1:1379216/150‑1 (MQ=255)
             gCGGTCGCCAGGGCGCGCGCAATTTCGACGCGGCGGCGTTCACCACCAGACAGGCTCATGCCGAGGTTGTCCCGGATGTGGCTGATGTGGAACTCCTGCAGCCGGCTTTCCAGCTCTTTGCGGCGGCCGTCCCGATCGAGGTCCTTGCgg                                                                                                                                  <  2:471432/150‑1 (MQ=255)
                gTCGCCAGGGCGCGCGCAATTTCGACGCGGCGGCGTTCACCACCAGACAGGCTCATGCCGAGGTTGTCCCGGATGTGGCTGATGTGGAACTCCTGCAGCAGGCTTTCCAGCTCTTTGCGGCGGCCGTCCCGATCGAGGTCCTTGCGGGtc                                                                                                                               >  2:1029423/1‑150 (MQ=255)
                   gCCAGGGCGCGCGCAATTTCGACGCGGCGGCGTTCACCACCAGACAGGCTCATGCCGAGGTTGTCCCGGATGTGGCTGATGTGGAACTCCTGCAGCAGGCTTTCCAGCTCTTTGCGGCGGCCGTCCCGATCGAGGTCCTTGCGGGTCTCg                                                                                                                            >  1:1437054/1‑150 (MQ=255)
                             gcgcAATTTCGACGCGGCGGCGTTCACCACCAGACAGGCTCATGCCGAGGTTGTCCCGGATGTGGCTGATGTGGACCTCCTGCAGCAGGCTTTCCAGCTCTTTGCGGCGGCCGTCCCGATCGAGGTCCTTGCGGGTCTCGAGGATGGCCa                                                                                                                  <  1:774386/150‑1 (MQ=255)
                                         cgcgGCGGCGTTCACCACCAGACAGGCTCATGCCGAGGTTGTCCCGGATGTGGCTGATGTGGAACTCCTGCAGCAGGCTTTCCAGCTCTTTGCGGCGGCCGTCCCGATCGAGGTCCTTGCGGGTCTCGAGGATGGCCATGATGTTGTCgg                                                                                                      <  1:369747/150‑1 (MQ=255)
                                            ggcggcgTTCACCACCAGACATGCTCATGCCGAGGTTGTCCCGGATGTGGCTGATGTGGAACTCCTGCAGCAGGCTTTCCAGCTCTTTGCGGCGGCCGTCCCGATCGAGGTCCTTGCGGGTCTCGAGGATGGCCATGATGTTGTCGGcga                                                                                                   <  1:82404/150‑1 (MQ=255)
                                            ggcggcgTTCACCACCAGACAGGCTCATGCCGAGGTTGTCCCGGATGTGGCTGATGTGGAACTCCTGCAGCAGGCTTTCCAGCTCTTTGCGGCGGCCGTCCCGATCGAGGTCCTTGCGGGTCTCGAGGATGGCCATGATGTTGTCGGcga                                                                                                   <  1:1644246/150‑1 (MQ=255)
                                                cagcccatgcacggccgcgcccgtgccggaatcggctacctgccgcaggaagcctcgatcttccgcaagctgtcggtcgccgacaacatcatggccatccTCGa                                                                                                                                             <  2:314468‑M1/4‑1 (MQ=255)
                                                cagcccatgcacggccgcgcccgtgccggaatcggctacctgccgcaggaagcctcgatcttccgcaagctgtcggtcgccgacaacatcatggccatccTCGa                                                                                                                                             >  1:314468‑M1/101‑104 (MQ=255)
                                                      accaccAGACAGGCTCATGCCGAGGTTGTCCCGGATGTGGCTGATGTGGAACTCCTGCAGCAGGCTTTCCAGCTCTTTGCGGCGGCCGTCCCGATCGAg                                                                                                                                            >  2:1271053/1‑99 (MQ=255)
                                                      accaccAGACAGGCTCATGCCGAGGTTGTCCCGGATGTGGCTGATGTGGAACTCCTGCAGCAGGCTTTCCAGCTCTTTGCGGCGGCCGTCCCGATCGAg                                                                                                                                            <  1:1271053/99‑1 (MQ=255)
                                                        caccaGACAGGCTCATGCCGAGGTTGTCCCGGATGTGGCTGATGTGGAACTCCTGCAGCAGGCTTTCCAGCTCTTTGCGGCGGCCGTCCCGATCGAGGTCCTTGCGGGTCTCGAGGCTGGCCATGACGTTGGCTGCGTCGGACAGCTGGc                                                                                       >  2:1587532/1‑150 (MQ=255)
                                                        caccaGACAGGCTCATGCCGAGGTTGTCCCGGATGTGGCTGATGTGGAACTCCTGCAGCAGGCTTTCCAGCTCTTTGCGGCGGCCGTCCCGATCGAGGTCCTTGCGGGTCTCGAGGATGGCCATGATGTTGTCGGCGACCGACAGCTTGc                                                                                       <  1:320312/150‑1 (MQ=255)
                                                         accaGACAGGCTCATGCCGAGGTTGTCCCGGATGTGGCTGATGTGGAACTCCTGCAGCAGGCTTTCCAGCTCTTTGCGGCGGCCGTCCCGATCGAGGTCCTTGCGGGTCTCGAGGATGGCCat                                                                                                                 <  2:396863/123‑1 (MQ=255)
                                                         accaGACAGGCTCATGCCGAGGTTGTCCCGGATGTGGCTGATGTGGAACTCCTGCAGCAGGCTTTCCAGCTCTTTGCGGCGGCCGTCCCGATCGAGGTCCTTGCGGGTCTCGAGGATGGCCat                                                                                                                 >  1:396863/1‑123 (MQ=255)
                                                          ccaGACAGGCTCATGCCGAGGTTGTCCCGGATGTGGCTGATGTGGAACTCCTGCAGCAGGCTTTCCAGCTCTTTGCGGCGGCCGTCCCGATCGAGGTCCTTGCGGGTCTCGAGGATGGCCATGATGTTGTCGGCGACCGACAGCTTGCgg                                                                                     >  1:384083/1‑150 (MQ=255)
                                                              aCAGGCTCATGCCGAGGTTGTCCCGGATGTGGCTGATGTGGAACTCCTGCAGCAGGCTTTCCAGCTCTTTGCGGCGGCCGTCCCGATCGAGGTCCTTGCGGGTCTCGAGGATGGCCATGATGTTGTCGGCGACCGACAGCTTGCGGAAGa                                                                                 >  1:1218478/1‑150 (MQ=255)
                                                                aGGCTCATGCCGAGGTTGTCCCGGATGTGGCTGATGTGGAACTCCTGCAGCAGGCTTTCCAGCTCTTTGCGGCGGCCGTCCCGATCGAGGTCCTTGCGGGTCTCGAGGATGGCCATGATGTTGTCGGCGACCGACAGCTTGCGGAAGATc                                                                               >  1:257348/1‑150 (MQ=255)
                                                                   cTCATGCCGAGGTTGTCCCGGATGTGGCTGATGTGGAACTCCTGCAGCAGGCTTTCCAGCTCTTTGCGGCGGCCGTCCCGATCGAGGTCCTTGCGGGTCTCGAGGATGGCCATGATGTTGTCGGCGACCGACAGCTTGCGGAAGATCGAg                                                                            <  2:257348/150‑1 (MQ=255)
                                                                    tCATGCCGAGGTTGTCCCGGATGTGGCTGATGTGGAACTCCTGCAGCAGGCTTTCCAGCTCTTTGCGGCGGCCGTCCCGATCGAGGTCCTTGCGGGTCTCGAGGATGGCCATGATGTTGTCGGCGACCGACAGCTTGCGGAAGATCGAgg                                                                           >  2:183222/1‑150 (MQ=255)
                                                                       tgccggaatcggctacctgccgcaggaagcctcgatcttccgcaagctgtcggtcgccgacaacatcatggccatccTCGAGGTCCTTGCGGGTCTCGAGGATg                                                                                                                      >  1:247834‑M1/78‑104 (MQ=255)
                                                                       tgccggaatcggctacctgccgcaggaagcctcgatcttccgcaagctgtcggtcgccgacaacatcatggccatccTCGAGGTCCTTGCGGGTCTCGAGGATg                                                                                                                      <  2:247834‑M1/27‑1 (MQ=255)
                                                                          cGAGGTTGTCCCGGATGTGGCTGATGTGGAACTCCTGCAGCAGGCTTTCCAGCTCTTTGCGGCGGCCGTCCCGATCGAGGTCCTTGCGGGTCTCGAGGATGGCCATGATGTTGTCGGCGACCGACAGCTTGCGGAAGATCGAGGCTTCCt                                                                     >  1:1062145/1‑150 (MQ=255)
                                                                                  tCCCGGATGTGGCTGATGTGGAACTCCTGCAGCAGGCTTTCCAGCTCTTTGCGGCGGCCGTCCCGATCGAGGTCCTTGCGGGTCTCGAGGATGGCCATGATGTTGTCGGCGACCGACAGCTTGCGGAAGATCGAGGCTTCCTGCGGCAgg                                                             >  2:660039/1‑150 (MQ=255)
                                                                                    ccGGATGTGGCTGATGTGGAACTCCTGCAGCAGGCTTTCCAGCTCTTTGCGGCGGCCGTCCCGATCGAGGTCCTTGCGGGTCTCGAGGATGGCCATGATGTTGTGCATTACCGACAGCTTGCGGAAGATCGAGGCTTCCTGCGGCAGGtg                                                           >  1:351142/1‑149 (MQ=255)
                                                                                      ggATGTGGCTGATGTGGAACTCCTGCAGCAGGCGTTCGATCTCTTTGCGGCGGCCGTCCCGATCGAGGTCCTTGCGGGTCTCGAGGATGGCCATGATGTTGTCGGCGACCGCCAGCTTGCGGAAGATCGAGGCTTCCTGCGGCAGGTAGc                                                         <  2:949514/150‑1 (MQ=255)
                                                                                       gATGTGGCTGATGTGGAACTCCTGCAGCAGGCTTTCCAGCTCTTTGCGGCGGCCGTCCCGATCGAGGTCCTTGCGGGTCTCGAGGATGGCCATGATGTTGTCGGCGACCGACAGCTCCCCCAGCATCGAGGCTTCCTGCGGCAGGTAGcc                                                        <  1:1276556/150‑1 (MQ=255)
                                                                                         tgtgGCTGATGTGGAACTCCTGCAGCAGGCTTTCCAGCTCTTTGCGGCGGCCGTCCCGATCGAGGTCCTTGCGGGTCTCGAGGATGGCCATGATGTTGTCGGCGACCGACAGCTTGCGGAAGATCGAGGCTTCCTGCGGCAGGTAGCCGa                                                      <  1:1029423/150‑1 (MQ=255)
                                                                                                  tgtgGAACTCCTGCAGCAGGCTTTCCAGCTCTTTGCGGCGGCCGTCCCGATCGAGGTCCTTGCGGGTCTCGAGGATGGCCATGATGTTGTCGGCGACCGACAGCTTGCGGAAGATCGAGGCTTCCTGCGGCAGGTAGCCGATTCCGGCAc                                             >  1:830485/1‑150 (MQ=255)
                                                                                                  tgtgGAACTCCTGCAGCAGGCTTTCCAGCTCTTTGCGGCGGCCGTCCCGATCGAGGTCCTTGCGGGTCTCGAGGATGGCCATGATGTTGTCGGCGACCGACAGCTTGCGGAAGATCGAGGCTTCCTGCGGCAGGTAGCCGATTCCGGCAc                                             <  1:183222/150‑1 (MQ=255)
                                                                                                    tgGAACTCCTGCAGCAGGCTTTCCAGCTCTTTGCGGCGGCCGTCCCGATCGAGGTCCTTGCGGGTCTCGAGGATGGCCATGATGTTGTCGGCGACCGACAGCTTGCGGAAGATCGAGGCt                                                                         <  2:968477/120‑1 (MQ=255)
                                                                                                    tgGAACTCCTGCAGCAGGCTTTCCAGCTCTTTGCGGCGGCCGTCCCGATCGAGGTCCTTGCGGGTCTCGAGGATGGCCATGATGTTGTCGGCGACCGACAGCTTGCGGAAGATCGAGGCt                                                                         >  1:968477/1‑120 (MQ=255)
                                                                                                     ggAACTCCTGCAGCAGGCTTTCCAGCTCTTTGCGGCGGCCGTCCCGATCGAGGTCCTTGCGGGtctc                                                                                                                             >  1:21017/1‑67 (MQ=255)
                                                                                                     ggAACTCCTGCAGCAGGCTTTCCAGCTCTTTGCGGCGGCCGTCCCGATCGAGGTCCTTGCGGGtctc                                                                                                                             <  2:21017/67‑1 (MQ=255)
                                                                                                     ggAACTCCTGCAGCAGGCTTTCCAGCTCTTTGCGGCGGCCGTCCCGATCGAGGTCCTTGCGGGTCTCGAGGATGGCCATGATGTTGTCGGCGACCGACAGCTTGCGGAAGATCGAGGCTTCCTGCGGCAGGTAGCCGATTCCGGCACggg                                          >  2:1485860/1‑150 (MQ=255)
                                                                                                      gAACTCCTGCAGCAGGCTTTCCAGCTCTTTGCGGCGGCCGTCCCGATCGAGGTCCTTGCGGGTCTCGAGGATGGCCATGATGTTGTCGGCGACCGACAGCTTGCGGAAGATCGAGGCTTCCTGCGGCAGGTAGCCGATTCCGGCACGGgc                                         >  2:503397/1‑150 (MQ=255)
                                                                                                        gatcttccgcaagctgtcggtcgccgacaacatcatggccatccTCGAGGTCCTTGCGGGtc                                                                                                                               >  2:925942‑M1/45‑62 (MQ=255)
                                                                                                        gatcttccgcaagctgtcggtcgccgacaacatcatggccatccTCGAGGTCCTTGCGGGtc                                                                                                                               <  1:925942‑M1/18‑1 (MQ=255)
                                                                                                        aCTCCTGCAGCAGGCTTTCCAGCTCTTTGCGGCGGCCGTCCCGATCGAGGTCCTTGCGGGTCTCGAGGATGGCCATGATGTTGTCGGCGACCGACAGCTTGCGGAAGATCGAGGCTTCCTGCGGCAGGTAGCCGATTCCGGCACGGgcgc                                       >  1:1208222/1‑150 (MQ=255)
                                                                                                         cTCCTGCAGCAGGCTTTCCAGCTCTTTGCGGCGGCCGTCCCGATCGAGGTCCTTGCGGGTCTCGAGGATGGCCATGATGTTGTCGGCGACCGACAGCTTGCGGAAGATCGAGGCTTCCTGCGGCAGGTAGCCGATTCCGGCACGGGcgcg                                      <  2:1218478/150‑1 (MQ=255)
                                                                                                                agcagGCTTTCCAGCTCTTTGCGGCGGCCGTCCCGATCGAGGTCCTTGCGGGTCTCGAGGATGGCCATGATGTTGTCGGCGACCGACAGCTTGCGGAAGATCGAGGCTTCCTGCGGCAGGTAGCCGATTCCGGCACGGGCGCGGCCGTGc                               >  1:213985/1‑150 (MQ=255)
                                                                                                                agcagGCTTTCCAACTCTTTGCGGCGGCCGTCCCGATCGAGGTCCTTGCGGGTCTCGAGGATGGCCATGATGTTGTCGGCGACCGACAGCTTGCGGAAGATCGAGGCTTCCTGCGGCAGGTAGCCGATTCCGGCACGGGCGCGGCCGAGc                               >  1:394158/1‑150 (MQ=255)
                                                                                                                  cagGCTTTCCAGCTCTTTGCGGCGGCCGTCCCGATCGAGGTCCTTGCGGGTCTCGAGGATGGCCATGATGTTGTCGGCGACCGACAGc                                                                                           <  2:1105572/88‑1 (MQ=255)
                                                                                                                  cagGCTTTCCAGCTCTTTGCGGCGGCCGTCCCGATCGAGGTCCTTGCGGGTCTCGAGGATGGCCATGATGTTGTCGGCGACCGACAGCTTGCGGAAGATCGAGGCTTCCTGc                                                                   >  1:1433778/1‑112 (MQ=255)
                                                                                                                  cagGCTTTCCAGCTCTTTGCGGCGGCCGTCCCGATCGAGGTCCTTGCGGGTCTCGAGGATGGCCATGATGTTGTCGGCGACCGACAGCTTGCGGAAGATCGAGGCTTCCTGc                                                                   <  2:1433778/112‑1 (MQ=255)
                                                                                                                  cagGCTTTCCAGCTCTTTGCGGCGGCCGTCCCGATCGAGGTCCTTGCGGGGCTCGAGGATGGCCATGATGTTGTCGGCGACCGACAGc                                                                                           >  1:1105572/1‑88 (MQ=255)
                                                                                                                     gCTTTCCAGCTCTTTGCGGCGGCCGTCCCGATCGAGGTCCTTGCGGGTCTCGAGGATGGCCATGATGTTGTCGGCGACCGACAGCTTGCGGAAGATCGAGGCTTCCTGCGGCAGGTAGCCGATTCCGGCACGGGCGCGGCCGTGCATggg                          <  2:1208222/150‑1 (MQ=255)
                                                                                                                      cTTTCCAGCTCTTTGCGGCGGCCGTCCCGATCGAGGTCCTTGCGGGTCTCGAGGATGGCCATGATGTTGTCGGCGACCGACAGCTTGCGGAAGATCGAGGCTTCCTGCGGCAGGTAGCCGATTCCGGCACGGGCGCGGCCGTGCATGGGc                         <  1:1587532/150‑1 (MQ=255)
                                                                                                                       tttCCAGCTCTTTGCGGCGGCCGTCCCGATCGAGGGCCTTGCGGGTCTCGAGGATGGCCATGATGTTGTCGGCGACCGACAGCTTGCGGAAGATCGAGGCTTCCTGCGGCAGGTAGCCGATTCCGGCACGGGCGCGGCCGTGCATGGGcg                        >  1:123225/1‑149 (MQ=255)
                                                                                                                            aGCTCTTTGCGGCGGCCGTCCCGATCGAGGTCCTTGCGGGTCTCGAGGATGGCCATGATGTTGTCGGCGACCGACAGCTTGCGGAAGATCGAGGCTTCCTGCGGCAGGTAGCCGATTCCGGCACGGGCGCGGCCGTGCATGGGCtggtgg                   >  2:1608572/1‑150 (MQ=255)
                                                                                                                            aGCTCTTTGCGGCGGCCGTCCCGATCGAGGTCCTTGCGGGTCTCGAGGATGGCCATGATGTTGTCGGCGACCGACAGCTTGCGGAAGATCGAGGCTTCCTGCGGCAGGTAGCCGATTCCGGCACGGGCGCGGCCGTGCATGGGCtggtgg                   <  2:109841/150‑1 (MQ=255)
                                                                                                                              ctctTTGCGGCGGCCGTCCCGATCGAGGTCCTTGCGGGTCTCGAGGATGGCCATGATGTTGTCGGCGACCGACAGCTTGCGGAAGATCGAGGCTTCCTGCGGCAGGTAGCCGATTCCGGCACGGGCGCGGCCGTGCATGGGCTGGTGGCt                 <  2:1437054/150‑1 (MQ=255)
                                                                                                                              ctctTTGCGGCGGCCGTCCCGATCGAGGTCCTTGCGGGTCTCGAGGATGGCCATGATGTTGTCGGCGACCGACAGCTTGCGGAAGATCGAGGCTTCCTGCGGCAGGTAGCCGATTCCGGCACGGGCGCGGCCGTGCATGGGCTGGTGGCt                 <  1:503397/150‑1 (MQ=255)
                                                                                                                               tctTTGCGGCGGCCGTCCCGATCGAGGTCCTTGCGGGTCTCGAGGATGGCCATGATGTTGTCGGCGACCGACAGCTTGCGGAAGATCGAGGCTTCCTGCGGCAGGTAGCCGATTCCGGCACGGGCGCGGCCGTGCATGGGCTGGTGGCTg                >  2:1311580/1‑150 (MQ=255)
                                                                                                                                ctTTGCGGCGGCCGTCCCGATCGAGGTCCTTGCGGGTCTCGAGGATGGCCATGATGTTGTCGGCGACCGACAGCTTGCGGAAGATCGAGGCTTCCTGCGGCAGGTAGCCGATTCCGGCACGGGCGCGGCCGTGCATGGGCTGGTGGCTGa               <  1:1068858/150‑1 (MQ=255)
                                                                                                                                             gTCCCGATCGAGGTCCTTGCGGGTCTCGAGGATGGCCATGATGTTGTCGGCGACCGACAGCTTGCGGAAGATCGAGGCTTCCTGCGGCAGGTAGCCGATTCCGGCACGGGCGCGGCCGTGCATGGGCTGGTGGCTGACATCGAGGGTGTc  >  1:314891/1‑150 (MQ=255)
                                                                                                                                                    |                                                                                                                                              
GATGAACTTGGGTGCGGTCGCCAGGGCGCGCGCAATTTCGACGCGGCGGCGTTCACCACCAGACAGGCTCATGCCGAGGTTGTCCCGGATGTGGCTGATGTGGAACTCCTGCAGCAGGCTTTCCAGCTCTTTGCGGCGGCCGTCCCGATCGAGGTCCTTGCGGGTCTCGAGGATGGCCATGATGTTGTCGGCGACCGACAGCTTGCGGAAGATCGAGGCTTCCTGCGGCAGGTAGCCGATTCCGGCACGGGCGCGGCCGTGCATGGGCTGGTGGCTGACATCGAGGTTGTC  >  NC_002947/1096490‑1096780

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.