BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2078299	63 (1.050)	7 (0.140)	6/206	NT	11.6%	intergenic (+41/+74)	PP_1853/PP_1854	LysR family transcriptional regulator/hypothetical protein
*	?	NC_002947	= 2078346	53 (1.030)	7 (0.140)	6/206	NT	11.6%	intergenic (+88/+27)	PP_1853/PP_1854	LysR family transcriptional regulator/hypothetical protein

Only 100 of 103 total aligned reads displayed.

CACAAGCTGTTGCCGGGCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCA  >  NC_002947/2078154‑2078443

cacaAGCTGTTGCCGGGCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCAccc                                                                                                                                              >  2:1358981/1‑150 (MQ=255)

   aaGCTGTTGCCGGGCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCcaca                                                                                                                                           >  2:1331610/1‑150 (MQ=255)

      cTGTTGCCGGGCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCCATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAggg                                                                                                                                        <  2:1175296/150‑1 (MQ=255)

       tGTTGCCGGGCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGa                                                                                                                                       <  1:1231421/150‑1 (MQ=255)

              gggCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGTGTCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGCTTTcaca                                                                                                                                >  1:117106/1‑150 (MQ=255)

                 cAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCCGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGcc                                                                                                                             >  2:1093053/1‑150 (MQ=255)

                   aGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCt                                                                                                                           >  1:1623682/1‑150 (MQ=255)

                      cccGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCCGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGaa                                                                                                                        <  1:1093053/150‑1 (MQ=255)

                      cccAGGCTTTCATCTATTTTGTCGTTGACCAGTTTGCCGACCATGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTTCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGaa                                                                                                                        <  2:782357/150‑1 (MQ=255)

                       ccGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCCCAGGGATATCACAGCCCTGaaa                                                                                                                       >  2:1112353/1‑149 (MQ=255)

                       ccGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAg                                                                                                                       >  2:1203886/1‑150 (MQ=255)

                             gTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGAAATCACAGCCCTGAAGACAGTg                                                                                                                 >  1:1315650/1‑150 (MQ=255)

                                 aTCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGTCTGAACCGGCCTCTTCGCGGGCCCGCCCGCtcccacaaggaccccactgtcttcagggctgtgatat                                                                                                             >  2:622598‑M1/1‑113 (MQ=255)

                                 aTCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGaa                                                                                                                        <  1:1084349/139‑1 (MQ=255)

                                 aTCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGaa                                                                                                                        >  2:1084349/1‑139 (MQ=255)

                                  tCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCCCAGGGATATCACAGCCCTGAAGAAAGTgcggcg                                                                                                            >  2:1411251/1‑148 (MQ=255)

                                  tCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTc                                                                                                            >  2:1497769/1‑150 (MQ=255)

                                  tCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTc                                                                                                            <  2:1623682/150‑1 (MQ=255)

                                      ttttGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTtg                                                                                                        <  1:1411251/150‑1 (MQ=255)

                                         tgtgGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTgg                                                                                                     <  1:1203886/150‑1 (MQ=255)

                                                 aGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGTCTGAACCGGCCTCTTCGCGGGCCCGCCCGCtcccacaaggaccccactgtcttcagggctgtgatatccctgtgggtgcgggc                                                                                             <  1:622598‑M1/150‑54 (MQ=255)

                                                 aGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCtcccacaaggaccccactgtcttcagggctgtgatatccctgtgggtgcgggc                                                                                             <  1:1177181‑M1/150‑54 (MQ=255)

                                                  gCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCCCACGGAAAAGCGTCGTCTGGGGACAGTGGGGTCCTTGTGGGAgcgggcg                                                                                            <  2:543726‑M2/150‑8 (MQ=255)

                                                   cAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAgcgggcgg                                                                                           >  1:1497769‑M2/1‑142 (MQ=255)

                                                   cAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAgcgggcgg                                                                                           >  2:1239959‑M2/1‑142 (MQ=255)

                                                      tttGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCAACACCCAACGGAAGAGCACAACGCTGAAGACAATGGGGTCCTTGTGGGAgagggcgggcc                                                                                        <  1:556233‑M2/150‑12 (MQ=255)

                                                      tttGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTACCGGCCTCTTCGCGGGCCCGCCCGCtcccacaaggaccccactgtcttcagggctgtgatatccctgtgggtgcgggcgggcc                                                                                        <  1:942033‑M1/150‑59 (MQ=255)

                                                         gCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGGTATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGGacgggcgggcacgg                                                                                     <  2:347985‑M2/150‑15 (MQ=255)

                                                           cGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACCGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAgcgggcgggcccgcgc                                                                                   <  2:1605766‑M2/150‑17 (MQ=255)

                                                           cGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAgcgggcggg                                                                                          >  2:1384191‑M2/1‑134 (MQ=255)

                                                           cGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAgcgggcggg                                                                                          <  1:1384191‑M2/143‑10 (MQ=255)

                                                            gAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCGTGTTGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAgcgggcgggcccgcgaa                                                                                  >  2:1043064‑M2/1‑133 (MQ=255)

                                                            gAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGaa                                                                                                                        >  1:561543/1‑112 (MQ=255)

                                                            gAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGaa                                                                                                                        <  2:561543/112‑1 (MQ=255)

                                                              gCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAaga                                                                                <  2:1315650/150‑1 (MQ=255)

                                                               cAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATGATTGCCTGTGCCGGCGTTTTCGCGGGCCCGCCCGCACCCACCGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAagag                                                                               <  2:1092000/150‑1 (MQ=255)

                                                                aGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAgg                                                                              <  1:1358981/150‑1 (MQ=255)

                                                                  gggCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGaa                                                                                                                        >  2:1614423/1‑106 (MQ=255)

                                                                  gggCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGaa                                                                                                                        <  1:1614423/106‑1 (MQ=255)

                                                                    gCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTTTTGCCTGTGCCGGCCTTTTCGCGGCACTGCCCGCTCCCACAGGGATATCACAGCCATGAAGACAGTCGTCTGTTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCgg                                                                          <  1:543726/150‑1 (MQ=255)

                                                                    gCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCgg                                                                          <  1:1279927/150‑1 (MQ=255)

                                                                      tGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCACACCCACAGGGATATCAAAGACCTGAAGAAAGAGGGGACCTTGTGGGAgcgggcgggcccgcgaaaaggccggtg                                                                        <  1:93324‑M2/150‑28 (MQ=255)

                                                                       ggcggggcggTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGaa                                                                                                                        >  1:747198/1‑101 (MQ=255)

                                                                       ggcggggcggTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGaa                                                                                                                        <  2:747198/101‑1 (MQ=255)

                                                                          ggggcggTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACACCCCTGAAGACAGTGGGGTCCTCGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGa                                                                    <  1:1331610/150‑1 (MQ=255)

                                                                             gcggTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCCACCACCGGGGGAACACAGCCCTGAAGACCGTGGGGGCCTTTGGGGAGCGGGGGGGGCCGGGAAGAGGGCGGGTCAAacaa                                                                 >  1:561125/1‑150 (MQ=255)

                                                                               ggTTCGATGCCCTGCAGGCCCTTTTGAGAATTATTGCCTGTGCCGGCCTTTTGGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGacaaca                                                               <  1:1112353/150‑1 (MQ=255)

                                                                               ggTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCtt                                                                                                         >  1:45075/1‑108 (MQ=255)

                                                                               ggTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCtt                                                                                                         <  2:45075/108‑1 (MQ=255)

                                                                                    gATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCtcccacaaggaccccactgtcttcagggctgtgatatccctgtgggtgcgggcgg                                                                                           <  2:762338‑M1/117‑56 (MQ=255)

                                                                                    gATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCtcccacaaggaccccactgtcttaagggctgtgatatccctgtgggtgcgggcgg                                                                                           >  1:762338‑M1/1‑62 (MQ=255)

                                                                                     aTGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTg                                                                                                                 <  1:1089909/94‑1 (MQ=255)

                                                                                     aTGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTg                                                                                                                 >  2:1089909/1‑94 (MQ=255)

                                                                                         ccTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCCGGAGAAGGCGGGTTCAGACAACATCAAAAATGa                                                     >  1:209292/1‑150 (MQ=255)

                                                                                         ccTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGGCCTTTTGGGAGCGGGCGGGGCCGGGAAGAGGCCGGTTCAAGCAAGATGGACGATGa                                                     >  2:335180/1‑150 (MQ=255)

                                                                                                  ccTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGa                                                                    >  2:1441989/1‑126 (MQ=255)

                                                                                                  ccTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGa                                                                    <  1:1441989/126‑1 (MQ=255)

                                                                                                  ccTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCACGCACCCACAGGGATAACACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGAGGGCAGGCCCGCAAAGAGGCAGGTTCAGACAACCTCGACAATCAACgcaacat                                            >  2:175364/1‑144 (MQ=255)

                                                                                                    tttAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGCGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCtgt                                          >  2:564586/1‑150 (MQ=255)

                                                                                                      tAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAgcgggcggg                                                                                          >  1:1139900‑M2/1‑91 (MQ=255)

                                                                                                      tAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAgcgggcggg                                                                                          <  2:1139900‑M2/100‑10 (MQ=255)

                                                                                                          gaATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGccc                                    >  2:72390/1‑150 (MQ=255)

                                                                                                           aaTTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTTCTTGTGGGAGCGGGCGGGCCCGCGAAGAAGGCGGTTCAGACAACAACCACGATGAACGATACCTGTGCGCCCa                                   >  1:1241870/1‑150 (MQ=255)

                                                                                                             ttattGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGGGCCCCgg                                 >  2:1400702/1‑150 (MQ=255)

                                                                                                               attGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTg                               <  2:1059445/150‑1 (MQ=255)

                                                                                                                ttGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTtg                                                                                                        <  2:1131491/76‑1 (MQ=255)

                                                                                                                ttGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTtg                                                                                                        >  1:1131491/1‑76 (MQ=255)

                                                                                                                ttGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTgcg                                       >  2:453916/1‑141 (MQ=255)

                                                                                                                ttGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTgcg                                       <  1:453916/141‑1 (MQ=255)

                                                                                                                      gtgCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCg                        >  2:1519222/1‑150 (MQ=255)

                                                                                                                       caccggCCTTTTCGCGGGCCCGCCCGCtcccacaaggtcccctctttcttcaggtctttgatatccctgtgggtgtgggcgggcccgcgaaaaggccggcacaggcaataattctctaaagggcctgcagggcatcgaaccgccccgcca                       <  1:93324‑M1/148‑124 (MQ=255)

                                                                                                                         ccacgcTTTTCGAGTTCCCGCCTGCACCCAACAGGTTATCACAGCCCTGAACACGGTGGTGTCCTTTGGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCa                     <  1:335180/145‑1 (MQ=255)

                                                                                                                         ccGGCCTTTTCGCGGGCCCGCCCGAACCCACAGGGATATCACAGCCCTGAAGACAGGGGGGGCCTTGTGGGCGCGGGCGGGCCCGCGAAGCGGCCGGTTCAGAGAACATCGACAATGAAAGCTACCGTTACGCCCAGGCGCCCCTCGTcc                     >  1:616/1‑149 (MQ=255)

                                                                                                                         ccGGCCTTTCCGCGGGCCCGCCCGCACCCACAGGGATAGCACAGCCCGGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCa                     <  2:561125/150‑1 (MQ=255)

                                                                                                                           ggCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATc                   <  1:1519222/150‑1 (MQ=255)

                                                                                                                              cTTTTCGCGGGCCCGCCCGCACCCACAGGGATAACACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCAGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCAc                >  1:27235/1‑150 (MQ=255)

                                                                                                                                tttCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGa                                                                    >  2:1086124/1‑96 (MQ=255)

                                                                                                                                tttCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGa                                                                    <  1:1086124/96‑1 (MQ=255)

                                                                                                                                tttCGCGGGCCCGCCCGCACCCACAGGGAGATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCAccc              >  1:1326078/1‑150 (MQ=255)

                                                                                                                                 ttCGCGGGCCCGCCCGCtcccacaaggaccccactgtcttcagggctgtgatatcaacacgggtgcgggcgggcccgcgaaaaggccggcacaggcaataattctctaaagggcctgcagggcatcgaaccgccccgccagcccctgctc             >  2:1043064‑M1/1‑17 (MQ=255)

                                                                                                                                  gcgcggGCCCGCCCGCtcccacaaggaccccactgtcttcagggctgtgatatcccggtgggtgcgggcgggcccgcgaaaaggccggcacaggcaataattctctaaagggcctgcagggcatcgaaccgccccgccagcccctgctcg            <  2:1605766‑M1/149‑135 (MQ=255)

                                                                                                                                    tcgGGCCCGCCCGAACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTc                                                                       <  1:1185924/88‑1 (MQ=255)

                                                                                                                                    gcgGGCCCGCCCGCtcccacaaggaccccactgtcttcagggctgtgatatccct                                                                                                         <  1:19091‑M1/55‑42 (MQ=255)

                                                                                                                                    gcgGGCCCGCCCGCtcccacaaggaccccactgtcttcagggctgtgatatccct                                                                                                         >  2:19091‑M1/1‑14 (MQ=255)

                                                                                                                                    gcgGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTc                                                                       >  2:1185924/1‑89 (MQ=255)

                                                                                                                                    ccgtgcccgcccgtccccacaaggaccccactgtcttcagggctgtgatacccctgtgggtgcgggcgggcccgcgaaaaggccggcacaggcaataattctctaaagggcctgcagggcatcgaaccgccccgccagcccctgctcggc          <  2:347985‑M1/146‑137 (MQ=255)

                                                                                                                                       ggCCCGCCCTCtcccacaaggaccccattgtcttcagcgttgtgctcttccgttgggtgttggcgggcccgcgaaaaggccggcacaggcaataattctctaaagggcctgcagggcatcgaaccgccccgccagcccctgctcggcaaa       <  1:556233‑M1/150‑140 (MQ=255)

                                                                                                                                       ggCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAgcgggcgggcccgcgaagaggccggtacaggcaataattctctaaagggcctgcagggcatcgaaccgccccgccagcccctgctcggcaaa       <  1:942033‑M2/150‑93 (MQ=255)

                                                                                                                                         cccgcccgCtcccacaaggaccccactgtcttcagggctgtgatatccctgtgggtgcgggcgggcccgcgaaaaggccggcacaggcaataattctctaaagggcctgcagggcatcgaaccgccccgccagcccctgctcg            >  2:1384191‑M1/1‑9 (MQ=255)

                                                                                                                                         cccgcccgCtcccacaaggaccccactgtcttcagggctgtgatatccctgtgggtgcgggcgggcccgcgaaaaggccggcacaggcaataattctctaaagggcctgcagggcatcgaaccgccccgccagcccctgctcg            <  1:1384191‑M1/143‑135 (MQ=255)

                                                                                                                                         cccgcccgCtcccacaaggaccccactgtcttcagggctgtgatatccctgtgggtgcgggcgggcccgcgaaaaggccggcacaggcaataattctcta                                                       <  2:1139900‑M1/100‑92 (MQ=255)

                                                                                                                                         cccgcccgCtcccacaaggaccccactgtcttcagggctgtgatatccctgtgggtgcgggcgggcccgcgaaaaggccggcacaggcaataattctcta                                                       >  1:1139900‑M1/1‑9 (MQ=255)

                                                                                                                                          ccgcccgctcccacaaggaccccactgtcttcagggctgtgatatccctgtgggtgcgggcgggcccgcgaaaaggccggcacaggcaataattctctaaagggcctgcagggcatcgaaccgccccgccagcccctgctcggcaaactg    >  1:1497769‑M1/1‑8 (MQ=255)

                                                                                                                                          ccgcccgcACCCACAGGGATATCACAGCCCTTAAGACAGTGGGGTCCTTGTGGGAgcgggcgggcccgcgaaaaggccggcacaggcaataattctctaaagggcctgcagggcatc                                     >  1:762338‑M2/1‑55 (MQ=255)

                                                                                                                                          ccgcccgcACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAgcgggcgggcccgcgaaaaggccggcacaggcaataattctctaaagggcctgcagggcatc                                     <  2:762338‑M2/117‑63 (MQ=255)

                                                                                                                                           cgcccgctcccacaaggaccccactgtccccagacgacgcttttccgtgggggtgcgggcgggcccgcgaaaaggccggcacaggcaataattctctaaagggcctgcagggcatcgaaccgccccgccagcccctgctcggcaaactgc   <  2:543726‑M1/150‑144 (MQ=255)

                                                                                                                                            gcccgcACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAgcgggcgggcccgcgaagaggccggttcagacaataattctctaaagggcctgcagggcatcgaaccgccccgccagcccctgctcggcaaactgct  <  1:622598‑M2/150‑98 (MQ=255)

                                                                                                                                            gcccgcACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAgcgggcgggcccgcgaaaaggccggcacaggcaataattctctaaagggcctgcagggcatcgaaccgccccgccagcccctgctcggcaaactgct  <  1:1177181‑M2/150‑98 (MQ=255)

                                                                                                                                                gcACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATAc                                              >  2:1013907/1‑102 (MQ=255)

                                                                                                                                                gcACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATAc                                              <  1:1013907/102‑1 (MQ=255)

CACAAGCTGTTGCCGGGCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCA  >  NC_002947/2078154‑2078443

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.