New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2832716 =	59 (0.990)	5 (0.090)	5/226	NT	8.2%	intergenic (‑21/+46)	PP_2485/PP_2486	hypothetical protein/Oye family NADH‑dependent flavin oxidoreductase
	?	NC_002947	2832764 =	57 (1.010)					coding (1123/1125 nt)	PP_2486	Oye family NADH‑dependent flavin oxidoreductase

AGCATGCTCGGTGTATCACCTTCGAAAGCCTCTAGGGGAAAGAACAGCCCAAGGCTTAGATGACCCTGCCTGAAGGTTCGTTTGAATCCCCTATGCTCTTGGTAGGGGATCGTGCTCGGTTGGTACATGCTTAACTTCCTCGGTCAGCAAACGCTGA‑‑GCCACGCCCCTGAGTTATGGGGCGTGGCATTGAGCGTTTAGGATTTGTAAGTCGGGTAGTCGGTGTAGCCCTTATCGGTACCGCCGTACATGCTGCTTGGATCAACTGGGTTAAGCGGCCAGTTGTTGGCGATACGAGCGG  >  NC_002947/2832568‑2832865                                                                                                                                                     |                                                                                                                                                        gacctgatcgcttttggtcgccccttcattgcgaaccccgacctgcccgctcgtatcgccaacaactggccgcttaacccagttgatccaagcagcatgtacggcggtaccgataagggctacaccgactacccgacttacaaatcctaa                                                                                                                                                        >  1:1629765‑M1/149‑150 (MQ=255) aGCATGCTCGGTGTATCACCTTCGAAAGCCTCTAGGGGAAAGAACAGCCCAAGGCTTAGATGACCCTGCCTGAAGGTTCGTTTGAATCCCCTATGCTCTTGGTAGGGGATCGTGCTCGGTTGGTACATGCTTAACTTCCTCGGTCAGCaa                                                                                                                                                        >  1:569350/1‑150 (MQ=255)      gCTCGGTGTATCACCTTCGAAAGCCTCTAGGGGAAAGAACAGCCCAAGGCTTAGATGACCCTGCCTGAAGGTTCGTTTGAATCCCCTATGCTCTTGGTAGGGGATCGTGCTCGGTTGGTACATGCTTAACTTCCTCGGTCAGCAAACGCt                                                                                                                                                   <  2:1536002/150‑1 (MQ=255)        tCGGTGTATCACCTTCGAAAGCCTCTAGGGGAAAGAACAGCCCAAGGCTTAGATGACCCTGCCTGAAGGTTCGTTTGAATCCCCTATGCTCTTGGTAGGGGATCGTGCTCGGTTGGTACATGCTTAACTTCCTCGGTCAGCAAACGCTGa                                                                                                                                                 >  2:66436/1‑150 (MQ=255)                   ccTTCGAAAGCCTCTAGGGGAAAGAACAGCCCAAGGCTTAGATGACCCTGCCTGAAGGTTCGTTTGAATCCCCTATGCTCTTGGTAGGGGATCGTGCTCGGTTGGTACATGCTTAACTTCCTCGGTCAGCAAACGCTGA‑‑GCCACGCCCCt                                                                                                                                    <  1:1130765/150‑1 (MQ=255)                    cTTCGAAAGCCTCTAGGGGAAAGAACAGCCCAAGGCTTAGATGGCCCTGCCTGAAGGTTCGTTTGAATCCCCTATGCTCTTGGTAGGGGATCGTGCTCGGTTGGTACATGCTTAACTTCCTCGGTCGGCAAACGCTGA‑‑GCCACGCCCCTg                                                                                                                                   >  1:1581428/1‑150 (MQ=255)                     ttCGAAAGCCTCTAGGGCAAAGAACAGCCCAATGCTTAGATGACCCTGCCTGAAGGTTCGTTTGAATCCCCTATGCTCTTGGTAGGGGATCGTGCTCGGTTGGTACATGCTTAACTTCCTCGGTCAGCAAACGCTGA‑‑GCCACGCCCCTGa                                                                                                                                  <  1:498025/150‑1 (MQ=255)                           aGCCTCTAGGGGAAAGAACAGCCCAAGGCTTAGATGACCCTGCCTGAAGGTTCGTTTGAATCCCCTATGCTCTTGGTAGGGGATCGTGCTCGGTCGGTACATCCTTAACTTCCTCGGTCAGCAAACGCTTA‑‑GCCACGCCCCTGAGTTATg                                                                                                                            <  2:227945/150‑1 (MQ=255)                            gCCTCTAGGGGAAAGAACAGCCCAAGGCTTAGATGACCCTGCCTGAAGGTTCGTTTGAATCCCCTATGCTCTTGGTAGGGGATCGTGCTCGGTTGGTACATGCTTAACTTCCTCGGTCAGCAAACGCTGA‑‑GCCACGCCCCTGAGTTATgg                                                                                                                           <  1:66436/150‑1 (MQ=255)                               tctAGGGGAAAGAACAGCCCAAGGCTTAGATGACCCTGCCTGAAGGTTCGTTTGAATCCCCTATGCTCTTGGTAGGGGATCGTGCTCGGTTGGTACATGCTTAACTTCCTCGGTCAGCAAACGCTGA‑‑GCCACGCCCCTGAGTTATGGGGc                                                                                                                        >  2:1535014/1‑150 (MQ=255)                                    gggAAAGAACAGCCCAAGGCTTAGATGACCCTGCCTGAAGGTTCGTTTGAATCCCCTATGCTCTTGGTAGGGGATCGTGCTCGGTTGGTACATGCTTAACTTCCTCGGTCAGCAAACGCTGA‑‑GCCACGCCCCTGAGTTATGGGGCGTGGc                                                                                                                   <  1:376175/150‑1 (MQ=255)                                    gggAAAGAACAGCCCAAGGCTTAGATGACCCTGCCTGAAGGTTCGTTTGAATCCAATATGCTCTTGGTAGGGGATCGTGCTCGGTTGGTACATGCTTAACTTCCTCGGTCAGCAAACGCTGA‑‑GCCACGCCCCTGAGTTATGGGGCGTGGc                                                                                                                   >  2:222778/1‑150 (MQ=255)                                     cccgacctgcccgctcgtatcgccaacaactggccgcttaacccagttgatccaagcagcatgtacggcggtaccgataagggctacaccgactacccgacttacaaatcctAAACGCTCAATGCCACGCCCCTGAGTTATGGGGCGTgg                                                                                                                    <  1:697104‑M1/38‑1 (MQ=255)                                      gAAAGAACAGCCCAAGGCTTAGATGACCCTGCCTGAAGGTTCGTTTGAATCCCCTATGCTCTTGGTAGGGGATCGTGCTCGGTTGGTACATGCTTAACTTCCTCGGTCAGCAAAc                                                                                                                                                      <  1:1279686/115‑1 (MQ=255)                                      gAAAGAACAGCCCAAGGCTTAGATGACCCTGCCTGAAGGTTCGTTTGAATCCCCTATGCTCTTGGTAGGGGATCGTGCTCGGTTGGTACATGCTTAACTTCCTCGGTCAGCAAAc                                                                                                                                                      >  2:1279686/1‑115 (MQ=255)                                      gAAAGAACAGCCCAAGGCTTAGATGACCCTGCCTGAAGGTTCGTTTGAATCCCCTATGCTCTTGGTAGGGGATCGTGCTCGGTTGGTACATGCTTAACTTCCTCGGTCAGCAAACGCTGA‑‑GCCACGCCCCTGAGTTATGGGGCGTGGCAt                                                                                                                 >  1:102788/1‑150 (MQ=255)                                           aaCAGCCCAAGGCTTAGATGACCCTGCCTGAAGGTTCGTTTGAATCCCCTATGCTCTTGGTAGGGGATCGTGCTCGGTTGGTACATGCTTAACTTCCTCCGTAATGAAACGCTGA‑‑GCCACGCCCCTGAGTTATGGGGCGTGGCAtggcgc                                                                                                            >  1:177636/1‑145 (MQ=255)                                              aGCCCAAGGCTTAGATGACCCTGCCTGAAGGTTCGTTTGAATCCCCTATGCTCTTGGTAGGGGATCGTGCTCGGTTGGTACATGCTTAACTTCCTCGGTCAGCAAACGCTGA‑‑GCCACGCCCCTGAGTTATGGGGCGTGGCATTGAGCGtt                                                                                                         <  2:569350/150‑1 (MQ=255)                                                cccAAGGCTTAGATGACCCTGCCTGAAGGTTCGTTTGAATCCCCTATGCTCTTGGTAGGGGATCGTGCTCGGTTGGTACATGCTTAACTTCCTCGGTCAGCAAACGCTGA‑‑GCCACGCCCCTGAGTTCTGGGCCGCGGCTTTGAGCGTTTa                                                                                                       >  2:1116434/1‑150 (MQ=255)                                                  ctcgtatcgccaacaactggccgcttaacccagttgatccaagcagcatgtacggcggtaccgataagggctacaccgactacccgacttacaaatcctAAACGCTCAATGCCACGCCCCTGAGTTATGGGGCGTGGCATTGAGCGTTTa                                                                                                       >  2:697104‑M1/100‑150 (MQ=255)                                                       atcgccaacaactggccgcttaacccagttgatccaagcagcatgtacggcggtaccgataagggctacaccgactacccgacttacaaatcctAAACGCTGA‑‑GCCACGCCCCTGAGTTATGGGGCGTGGCATTGAGCGTTTAGGATTTg                                                                                                <  2:1044903‑M1/56‑1 (MQ=255)                                                        ttAGATGACCCTGCCTGAAGGTTCGTTTGAATCCCCTATGCTCTTGGTAGGGGATCGTGCTCGGTTGGTACATGCTTAACTTCCTCGGTCAGCAAACGCTGA‑‑GCCACGCCCCTGAGTTATGGGGCGTGGCATTGAGCGTTTAGGATTTGt                                                                                               <  2:102788/150‑1 (MQ=255)                                                        tcgccaacaactggccgcttaacccagttgatccaagcagcatgtacggcggtaccgataagggctacaccgactacccgacttacaaatcctAAACGCTGA‑‑GCCACGCCCCTGAGTTATGGGGCGTGGCATTGAGCGTTTAGGATTTGt                                                                                               >  1:1044903‑M1/94‑150 (MQ=255)                                                         cgccaacaactggccgcttaacccagttgatccaagcagcatgtacggcggtaccgataagggctacaccgactatccgacttacaaatcctATACGCTGA‑‑GCCACGCCCCTGAGTTATGGGGCGTGGCATTGAGCGTTTAGGATTTGTa                                                                                              >  2:574421‑M1/93‑150 (MQ=255)                                                              gACCCTGCCTGAAGGTTCGTTTGAATCCCCTATGCTCTTGGTAGGGGATCGTGCTCGGTTGGTACATGCTTAACTTCCTCGGTCAGCAAACGCTGA‑‑GCCACGCCCCTGAGTTATGGGGCGTGGCATTGAGCGTTTAGGATTTGTAAGTCg                                                                                         <  1:493318/150‑1 (MQ=255)                                                                cccTGCCTGAAGGTTCGTTTGAATCCCCTATGCTCTTGGTAGGGGATCGTGCTCGGTTGGTACATGCTTAACTTCCTCGGTCAGCAAACGCTGA‑‑GCCACGCCCCTGAGTTATGGGGCGTGGCATTGAGCGTTTAg                                                                                                      <  2:34315/135‑1 (MQ=255)                                                                cccTGCCTGAAGGTTCGTTTGAATCCCCTATGCTCTTGGTAGGGGATCGTGCTCGGTTGGTACATGCTTAACTTCCTCGGTCAGCAAACGCTGA‑‑GCCACGCCCCTGAGTTATGGGGCGTGGCATTGAGCGTTTAg                                                                                                      >  1:34315/1‑135 (MQ=255)                                                                     cctgAAGGTTCGTTTGAATCCCCTATGCTCTTGGTAGGGGATCGTGCTCGGTTGGTACATGCTTAACTTCCTCGGTCAGCAAACGCTGA‑‑GCCACGCCCCTGAGTTATGGGGCGTGGCATTGAGCGTTTAGGATTTGTAAGTc                                                                                          >  1:903154/1‑142 (MQ=255)                                                                     cctgAAGGTTCGTTTGAATCCCCTATGCTCTTGGTAGGGGATCGTGCTCGGTTGGTACATGCTTAACTTCCTCGGTCAGCAAACGCTGA‑‑GCCACGCCCCTGAGTTATGGGGCGTGGCATTGAGCGTTTAGGATTTGTAAGTc                                                                                          <  2:903154/142‑1 (MQ=255)                                                                            gTTCGTTTGAATCCCCTATGCTCTTGGTAGGGGATCGTGCTCGGTTGGTACATGCTTAACTTCCTCGGTCAGCAAACGCTGA‑‑GCCACGCCCCTGAGTTATGGGGCGTGGCATTGAGCGTTTAGGATTTGTAAGTCGGGTAGTCGGTGTAg                                                                           <  1:1535014/150‑1 (MQ=255)                                                                               cGTTTGAATCCCCTATGCTCTTGGTAGGGGATCGTGCTCGGTTGGTACATGCTTAACTTCCTCGGTCAGCAAACGCTGA‑‑GCCACGCCCCTGAGTTATGGGGCGTGGCATTGAGCGTTTAGGATTTGTAAGTCGGGTAGTCGGTGTAGccc                                                                        <  1:1223599/150‑1 (MQ=255)                                                                                gTTTGAATCCCCTATGCTCTTGGTAGGGGATCGTGCTCGGTTGGTACATGCTTAACTTCCTCGGTCAGCAAACGCTGA‑‑GCCACGCCCCTg                                                                                                                                   >  1:1015498/1‑90 (MQ=255)                                                                                gTTTGAATCCCCTATGCTCTTGGTAGGGGATCGTGCTCGGTTGGTACATGCTTAACTTCCTCGGTCAGCAAACGCTGA‑‑GCCACGCCCCTg                                                                                                                                   <  2:1015498/90‑1 (MQ=255)                                                                                 tttGAATCCCCTATGCTCTTGGTAGGGGATCGTGCTCGGTTGGTACATGCTTAACTTCCTCGGTCAGCAAACGCTGA‑‑GCCACGCCCCTGAGTTATGGGGCGTGGCATTGAGCGTTTAGGATTTGTAAGTCGGGTAGTCGGTGTAGCCGtt                                                                      >  1:1586715/1‑150 (MQ=255)                                                                                 tttGAATCCCCTATGCTCTTGGTAGGGGATCGTGCTCGGTTGGTACATGCTTAACTTCCTCGGTCAGCAAACGCTGA‑‑GCCACGCCCCTGAGTTATGGGGCGTGGCATTGAGCGTTTAGGATTTGTAAGTCGGGTAGTCGGTGTAGCCCtt                                                                      >  2:1079511/1‑150 (MQ=255)                                                                                     aaTCCCCTATGCTCTTGGTAGGGGATCGTGCTCGGTTGGTACATGCTTAACTTCCTCGGTCAGCAAACGCTGA‑‑GCCACGCCCCTGAGTTATGGGGCGTGGCATTGAGCGTTTAGGATTTGTAAGTCGGGTAGTCGGTGTAGCCCTTATCg                                                                  >  2:1616291/1‑150 (MQ=255)                                                                                          ccTATGCTCTTGGTAGGGGATCGTGCTCGGTTGGTACATGCTTAACTTCCTCGGTCAGCAAACGCTGA‑‑GCCACGCCCCTGAGTTATGGGGCGTGGCATTGAGCGTTTAGGATTTGTAAGTCGGGTa                                                                                     <  2:1245007/126‑1 (MQ=255)                                                                                          ccTATGCTCTTGGTAGGGGATCGTGCTCGGTTGGTACATGCTTAACTTCCTCGGTCAGCAAACGCTGA‑‑GCCACGCCCCTGAGTTATGGGGCGTGGCATTGAGCGTTTAGGATTTGTAAGTCGGGTa                                                                                     >  1:1245007/1‑126 (MQ=255)                                                                                          ccTATGCTCTTGGTAGGGGATCGTGCTCGGTTGGTACATGCTTAACTTCCTCGGTCAGCAAACGCTGA‑‑GCCACGCCCCTGAGTTATGGGGCGTGGCATTGAGCGTTTAGGATTTGTAAGTCGGGTAGTCGGTGTAGCCCTTATCGGTAcc                                                             >  1:1510461/1‑150 (MQ=255)                                                                                          ccTATGCTCTTGGTAGGGGATCGTGCTCGGTTGGTACATGCTTAACTTCCTCGGTCAGCAAACGCTGA‑‑GCCACGCCCCTGAGTTATGGGGCGTGGCATTGAGCGTTTAGGATTTGTAAGTCGGGTAGTCGGTGTAGCCCTTATCGGTAcc                                                             >  2:284294/1‑150 (MQ=255)                                                                                           cTATGCTCTTGGTAGGGGATCGTGCTCGGTTGGTACATGCTTAACTTCCTCGGTCAGCAAACGCTGA‑‑GCCACGCCCCTGAGTTATGGGGCGTGGCATTGAGCGTTTAGGATTTGTaa                                                                                             >  2:164454/1‑117 (MQ=255)                                                                                           cTATGCTCTTGGTAGGGGATCGTGCTCGGTTGGTACATGCTTAACTTCCTCGGTCAGCAAACGCTGA‑‑GCCACGCCCCTGAGTTATGGGGCGTGGCATTGAGCGTTTAGGATTTGTaa                                                                                             <  1:164454/117‑1 (MQ=255)                                                                                             aTGCTCTTGGTAGGGGATCGTGCTCGGTTGGTACATGCTTAACTTCCTCGGTCAGCAAACGCTGA‑‑GCCACGCCCCTGAGTTATGGGGCGTGGCATTGAGCGTTTAGGATTTGTAAGTCGGGTAGTCGGTGTAGCCCTTATCGGTAccgcc                                                          >  1:707489/1‑150 (MQ=255)                                                                                                 tctTGGTAGGGGATCGTGCTCGGTTGGTACATGCTTAACTTCCTCGGTCAGCAAACGCTGA‑‑GCCACGCCCCTGAGTTATGGGGCGTGGCATTGAGCGTTTAGGATTTGTAAGTCGGGTAGTCg                                                                                 <  2:1166600/123‑1 (MQ=255)                                                                                                 tctTGGTAGGGGATCGTGCTCGGTTGGTACATGCTTAACTTCCTCGGTCAGCAAACGCTGA‑‑GCCACGCCCCTGAGTTATGGGGCGTGGCATTGAGCGTTTAGGATTTGTAAGTCGGGTAGTCg                                                                                 >  1:1166600/1‑123 (MQ=255)                                                                                                  ctTGGTAGGGGATCGTGCTCGGTTGGTACATGCTTAACTTCCTCGGTCAGCAAACGCTGA‑‑GCCACGCCCCTGAGTTATGGGGCGTGGCATTGAGCGTTTAGGATTTGTAAGTCGGGTAGTCGGTGTAGCCCTTATCGGTACCGCCGTACa                                                     <  2:468987/150‑1 (MQ=255)                                                                                                       ggcggtaccgataagggctacaccgactacccgacttacaaatcctaaa                                                                                                                                                       >  1:32916‑M1/47‑49 (MQ=255)                                                                                                       ggcggtaccgataagggctacaccgactacccgacttacaaatcctaaa                                                                                                                                                       <  2:32916‑M1/3‑1 (MQ=255)                                                                                                          gggATCGTGCTCGGTTGGTACATGCTTAACTTCCTCGGTCAGCAAACGCTGA‑‑GCCACGCCCCTGAGTTATGGGGCGTGGCATTGAGCGTTTAGGATTTGTAAGTCgg                                                                                        >  1:1141639/1‑107 (MQ=255)                                                                                                          gggATCGTGCTCGGTTGGTACATGCTTAACTTCCTCGGTCAGCAAACGCTGA‑‑GCCACGCCCCTGAGTTATGGGGCGTGGCATTGAGCGTTTAGGATTTGTAAGTCgg                                                                                        <  2:1141639/107‑1 (MQ=255)                                                                                                          gggATAGTGCTCAGTTGGTAAATAAGTAACTTCCTCTGTCAGCAAACGCTGA‑‑GCCACGCCCCTGAGTTATGGGGCGTGGCATTGAGCGTTTAGGATTTGTAAGTCGGGTAGTCGGTGTAGCCCTTATCGGTACCGCCGTACATGCTGCtt                                             <  2:1586715/150‑1 (MQ=255)                                                                                                           ggATCGTGCTCGGTTGGTACATGCTTAACTTCCTCGGTCAGCAAACGCTGA‑‑GCCACGCCCCTGAGTTATGGGGCGTGGCATTGAGCGTTTAGGATTTGTAAGTCGGGTAGTCGGTGTAGCCCTTATCGGTACCGCCGTACATGCTGCTTg                                            <  2:1510461/150‑1 (MQ=255)                                                                                                             aTCGTGCTCGGTTGGTACATGCTTAACTTCCTCGGTCGGCAAACGCTGA‑‑GCCACGCCCCTGAGTTATGGGGCGTGGCATTGAGCGTTTAGGATTTGTAAGTCGGGTAGTCGGTGTAGCCCTTATCGGTACCGCCGTACATGCTGCTTGGa                                          <  2:1581428/150‑1 (MQ=255)                                                                                                                    tCGGTTGGTACATGCTTAACTTCCTCGGTCAGCAAACGCTGA‑‑GCCACGCCCCTGAGTTATGGGGCGTGGCATTGAGCGTTTAGGATTTGTAAGTCGGGTAGTCGGTGTAGCCCTTATCGGTACCGCCGTACATGCTGCTTGGa                                          <  1:575343/143‑1 (MQ=255)                                                                                                                    tCGGTTGGTACATGCTTAACTTCCTCGGTCAGCAAACGCTGA‑‑GCCACGCCCCTGAGTTATGGGGCGTGGCATTGAGCGTTTAGGATTTGTAAGTCGGGTAGTCGGTGTAGCCCTTATCGGTACCGCCGTACATGCTGCTTGGa                                          >  2:575343/1‑143 (MQ=255)                                                                                                                    tCGGTTGGTACATGCTTAACTTCCTCGGTCAGCAAACGCTGA‑‑GCCACGCCCCTGAGTTATGGGGCGTGGCATTGAGCGTTTAGGATTTGTAAGTCGGGTAGTCGGTGTAGCCCTTATCGGTACCGCCGTACATGCTGCTTGGATCAACTg                                   >  1:1589136/1‑150 (MQ=255)                                                                                                                            tACATGCTTAACTTCCTCGGTCAGCAAACGCTGA‑‑GCCACGCCCCTGAGTTATGGGGCGTGGCATTGAGCGTTTAGGATTTGTAAGTCGGGTAGTCGGTGTAGCCCTTATCGGTACCGCCGTACATGCTGCTTGGATCAACTgg                                  >  2:644272/1‑143 (MQ=255)                                                                                                                            tACATGCTTAACTTCCTCGGTCAGCAAACGCTGA‑‑GCCACGCCCCTGAGTTATGGGGCGTGGCATTGAGCGTTTAGGATTTGTAAGTCGGGTAGTCGGTGTAGCCCTTATCGGTACCGCCGTACATGCTGCTTGGATCAACTgg                                  <  1:644272/143‑1 (MQ=255)                                                                                                                                tGCTTAACTTCCTCGGTCAGCAAACGCTGA‑‑GCCACGCCCCTGAGTTATGGGGCGTGGCATTGAGCGTTTAGGATTTGTAAGTCGGGTAGTCGGTGTAGCCCTTATCGGTACCGCCGTACATGCTGCTTGGATCAACTGGGTTAAGCGGcc                       >  2:163893/1‑150 (MQ=255)                                                                                                                                   ttAACTTCCTCGGTCAGCAAACGCTGA‑‑GCCACGCCCCTGAGTTATGGGGCGTGGCATTGAGCGTTTAGGATTTGTAAGTCGGGTAGTCGGTGTAGCCCTTATCGGTACCGCCGTACATGCTGCTTGGa                                          <  1:641759/128‑1 (MQ=255)                                                                                                                                   ttAACTTCCTCGGTCAGCAAACGCTGA‑‑GCCACGCCCCTGAGTTATGGGGCGTGGCATTGAGCGTTTAGGATTTGTAAGTCGGGTAGTCGGTGTAGCCCTTATCGGTACCGCCGTACATGCTGCTTGGa                                          >  2:641759/1‑128 (MQ=255)                                                                                                                                         tCCTCGGTCAGCAAACGCTGA‑‑GCCACGCCCCTGAGTTATGGGGCGTGGCATTGAGCGTTTAGGATTTGTAAGTCggg                                                                                       <  1:1015209/77‑1 (MQ=255)                                                                                                                                         tCCTCGGTCAGCAAACGCTGA‑‑GCCACGCCCCTGAGTTATGGGGCGTGGCATTGAGCGTTTAGGATTTGTAAGTCggg                                                                                       >  2:1015209/1‑77 (MQ=255)                                                                                                                                         tCCTCGGTCAGCAAACGCTGA‑‑GCCACGCCCCTGAGTTATGGGGCGTGGCATTGAGCGTTTAGGATTTGTAAGTCGGGTAGTCGGTGTAGCCCTTATCGGTACCGCCGTACATGCTGCTTGGATCAACTGGGTTAAGCGGCCAGTTGTTgg              >  1:1099416/1‑150 (MQ=255)                                                                                                                                         tCCTCGGTCAGCAAACGCTGA‑‑GCCACGCCCCTGAGTTATGGGGCGTGGCATTGAGCGTTTAGGATTTGTAAGTCGGGTAGTCGGTGTAGCCCTTATCGGTACCGCCGTACATGCTGCTTGGATCAACTGGGTTAAGCGGCCAGTTGTTgg              <  2:707489/150‑1 (MQ=255)                                                                                                                                          ccTCGGTCAGCAAACGCTGA‑‑GCCACGCCCCTGAGTTATGGGGCGTGGCATTGAGCGTTTAGGATTTGTAAGTCGGGTAGTCGGTGTAGCCCTTATCGGTACCGCCGTACATGCTGGTTGGATCAACTGGGTTAAGCGGCCAGTTGTTggt             >  1:826950/1‑149 (MQ=255)                                                                                                                                            tCGGTCAGCAAACGCTGA‑‑GCCACGGCATACTGGTATGGGGCGTGGCATTGAGCGTTTAGGATTTGTAAGTCGGGTAGTCGGTGTAGCCCTTATCGGTACCGCCGTACATGCTCCTTGGATCAACTGGGTTAAGCGGCCAGTTGTTGACGa           >  1:42657/1‑150 (MQ=255)                                                                                                                                            tCGGTCAGCAAACGCTGA‑‑GCCACGCCCCTGAGTTATGGGGCGTGGCATTGAGCGTTTAGGATTTGTAAGTCGGGTAGTCGGTGTAGCCCTTATCGGTACCGCCGTACATGCTGCTTGGATCAACTGGGTTAAGCGGCCAGTTGTTGGCGa           >  2:1463761/1‑150 (MQ=255)                                                                                                                                              ggTCAGCAAACGCTGA‑‑GCCACGCCCCTGAGTTATGGGGCGTGGCATTGAGCGTTTAGGATTTGTAAGTCGGGTAGTCGGTGTAGCCCTTATCGGTACCGCCGTACATGCTGCTTGGATCAACTGGGTTAAGCGGCCAGTTGTTGGCGATa         >  2:1290514/1‑150 (MQ=255)                                                                                                                                               gTCAGCAAACGCTGA‑‑GCCACGCCCCTGAGTTATGGGGTGTGGCATTGAGCGTTTAGGATTTGTAAGTCGGGTAGTCGGTGTAGCCCTTATCGGTACCGCCGTACATGCTGCTTGGATCAACTGGGTTAAGCGGCCAGTTGTTGGCGATAc        >  1:1328879/1‑150 (MQ=255)                                                                                                                                                   gCAAACGCTGA‑‑GCCACGCCCCTGAGTTATGGGGCGTGGCATTGAGCGTTTAGGATTTGTAAGTCGGGTAGTCGGTGTAGCCCTTATCGGTACCGCCGTACATGCTGCTTGGATCAACTggg                                 >  1:684039/1‑121 (MQ=255)                                                                                                                                                   gCAAACGCTGA‑‑GCCACGCCCCTGAGTTATGGGGCGTGGCATTGAGCGTTTAGGATTTGTAAGTCGGGTAGTCGGTGTAGCCCTTATCGGTACCGCCGTACATGCTGCTTGGATCAACTggg                                 <  2:684039/121‑1 (MQ=255)                                                                                                                                                     AAACGCTGA‑‑GCCACGCCCCTGAGTTATGGGGCGTGGCAtt                                                                                                                <  1:1352387‑M1/40‑1 (MQ=255)                                                                                                                                                     AAACGCTGA‑‑GCCACGCCCCTGAGTTATGGGGCGTGGCAtt                                                                                                                >  2:1352387‑M1/1‑40 (MQ=255)                                                                                                                                                     AAACGCTGA‑‑GCCACGCCCCTGAGTTATGGGGCGTGGCATTGAGCGTTTAGGATTTGTAAGTCGGGTAGTCg                                                                                 >  1:1281132‑M1/1‑71 (MQ=255)                                                                                                                                                     AAACGCTGA‑‑GCCACGCCCCTGAGTTATGGGGCGTGGCATTGAGCGTTTAGGATTTGTAAGTCGGGTAGTCg                                                                                 <  2:1281132‑M1/71‑1 (MQ=255)                                                                                                                                                     AAACGCTGA‑‑GCCACGCCCCTGAGTTATGGGGCGTGGCATTGAGCGTTTAGGATTTGTAAGTCGGGTAGTCGGTGTAGCCCTTATCGGTACCGCCGTACATGCTGCTTGGATCAACTGGGTTAAGCGGCCAGTTGTTGGCGATACGAGCgg  >  1:222778‑M1/1‑150 (MQ=255)                                                                                                                                                     |                                                                                                                                                        AGCATGCTCGGTGTATCACCTTCGAAAGCCTCTAGGGGAAAGAACAGCCCAAGGCTTAGATGACCCTGCCTGAAGGTTCGTTTGAATCCCCTATGCTCTTGGTAGGGGATCGTGCTCGGTTGGTACATGCTTAACTTCCTCGGTCAGCAAACGCTGA‑‑GCCACGCCCCTGAGTTATGGGGCGTGGCATTGAGCGTTTAGGATTTGTAAGTCGGGTAGTCGGTGTAGCCCTTATCGGTACCGCCGTACATGCTGCTTGGATCAACTGGGTTAAGCGGCCAGTTGTTGGCGATACGAGCGG  >  NC_002947/2832568‑2832865

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.