New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3697416 =	55 (0.920)	6 (0.110)	6/228	NT	10.1%	coding (116/417 nt)	PP_5595	hypothetical protein
	?	NC_002947	3697451 =	54 (0.950)					coding (81/417 nt)	PP_5595	hypothetical protein

GGGTCAGTGGAGCGATGCAGCTGCCGACACTCCCATCGGCGCACCGCGCTATTTTGCTCTTTTCGCTATTGAGCATGTCCTTGCTTTCGTTGCTGCATGACCAGTTGATCGCTTCGGCGGGTATGTTGCTGTAGCTGTAACAGGTGTGCCGCTCC‑‑‑ACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGGCTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAGGGCACAAGGCCCTCGTC  >  NC_002947/3697267‑3697561                                                                                                                                                      |                                                                                                                                                     caaagccatgcgccggcgcgacaagcctgctcagacctgacgagggccttgtgccctggaggtggaaaatgcgtgttcctgccttgatgatgatggttgccagcctggccagcggccaggtctgggccgaagcttgcaatgtgctgactc                                                                                                                                                      <  1:831145‑M1/1‑1 (MQ=255) caaagccatgcgccggcgcgacaagcctgctcagacctgacgagggccttgtgccctggaggtggaaaatgcgtgttcctgccttgatgatgatggttgccagcctggccagcggccaggtctgggccgaagcttgcaatgtgctgactc                                                                                                                                                      <  1:142443‑M1/1‑1 (MQ=255)  ggTCAGTGGAGCGATGCAGCTGCCGACACTCCCATCGGCGCACCGCGCTATTTTGCTCTTTTCGCTATTGAGCATGTCCTTGCTTTCGTTGCTGCATGACCAGTTGATCGCTTCGGCGGGTATGTTGCTGTAGCTGTAACAGGTGTGCCg                                                                                                                                                     >  2:1166715/1‑150 (MQ=255)              gATGCTGCTGCCGACACGCCCGTCGGCGGACAGCGCTATGTTGCGCGTTTCGCTATTGGGCGTGTCCGTGCTTTCGTTGCTGCCTGACCAGTTGATCACGTAAGCGTGCATGTTGCTGTATCTGTAACAGGTGTGCCGCTCC‑‑‑ACCAGCgc                                                                                                                                      <  2:132628/150‑2 (MQ=255)                   aGCTGCCGACACTCCCATCGGCGCACCGCGCTATTTTGCTCTTTTCGCTATTGAGCATGTCCTTGCTTTCGTTGCTGCATGACCAGTTGATCGCTTCGGCGGGTATGTTGCTGTAGCTGTAACAGGTGTGCCGCTCC‑‑‑ACCGGCGTCACgg                                                                                                                                 >  2:84070/1‑150 (MQ=255)                      tGCCGACACTCCCATCGGCGCACCGCGCTATTTTGCTCTTTTCGCTATTGAGCATGTCCTTGCTTTCGTTGCTGCATGGCCAGTTGATCGCTTCGGCGGGTAGGCAACTAGAGTTGGAACAGTTGTGCCGCTCC‑‑‑ACCGGCGTCACGGCGt                                                                                                                              >  1:1599940/1‑150 (MQ=255)                         cGACACTCCCATCGGCGCACCGCGCTATTTTGCTCTTTTCGCTATTGAGCATGTCCTTGCTTTCGTTGCTGCATGACCAGTTGATCGCTTCGGCGGGTATGTTGCTGTAGCTGTAACAGGTGTGCCGc                                                                                                                                                    >  1:1508570/1‑128 (MQ=255)                         cGACACTCCCATCGGCGCACCGCGCTATTTTGCTCTTTTCGCTATTGAGCATGTCCTTGCTTTCGTTGCTGCATGACCAGTTGATCGCTTCGGCGGGTATGTTGCTGTAGCTGTAACAGGTGTGCCGc                                                                                                                                                    <  2:1508570/128‑1 (MQ=255)                          gACACTCCCATCGGCGCACCGCGCTATTTTGCTCTTTTCGCTATTGAGCATGTCCTTGCTTTCGTTGCTGCATGACCAGTTGATCGCTTCGGCGGGTATGTTGCTGTAGCTGTAACAGGTGTGCCGCTCC‑‑‑ACCGGCGTCACGGCggcgat                                                                                                                          <  2:1219765/150‑6 (MQ=255)                           acacTCCCATCGGCGCACCGCGCTATTTTGCTCTTTTCGCTATTGAGCATGTCCTTGCTTTCGTTGCTGCATGACCAGTTGATCGCTTCGGCGGGTATGTTGCTGTAGCTGTAACAGGTGTGCCGCTCC‑‑‑ACCGGCGTCACGGCGTCGCTg                                                                                                                         <  1:123455/150‑1 (MQ=255)                               tcagacctgacgagggccttgtgccctggaggtggaaaatgcgtgttcctgccttgatgatgatggttgccagcctggccagcggccaggtctgggccgaagcttgcaatgtgctgactCGCTCC‑‑‑ACCGGCGTCACGGCGTCGCTggagg                                                                                                                     <  1:1311337‑M1/31‑1 (MQ=255)                               tCCCATCGGCGCACCGCGCTATTTTGCTCTTTTCGCTATTGAGCATGTCCTTGCTTTCGTTGCTGCATGACCAGTTGATCGCTTCGGCGGGTATGTTGCTGTAGCTGTAACAGGTGTGCCGCTCC‑‑‑ACCGGCGTCACGGCGTCGCTggagg                                                                                                                     >  1:287353/1‑150 (MQ=255)                               tCCCATCGGCGCACCGCGCTATTTTGCTCTTTTCGCTATTGAGCATGTCCTTGCTTTCGTTGCTGCATGACCAGTTGATCGCTTCGGCGGGTATGTTGCTGTAGCTGTAACAGGTGTGCCGCTCC‑‑‑ACCGGCGTCACGGCGTCGCTggagg                                                                                                                     >  1:990500/1‑150 (MQ=255)                               tCCCATCGGCGCACCGCGCTATTTTGCTCTTTTCGCTATTGAGCATGTCCTTGCTTTCGTTGCTGCATGACCAGTTGATCGCTTCGGCGGGTATGTTGCTGTAGCTGTAACAGGTGTGCCGCTCC‑‑‑ACCGGCGTCACGGCGTCGCTggagg                                                                                                                     <  1:1055119/150‑1 (MQ=255)                                 ccATCGGCGCACCGCGCTATTTTGCTCTTTTCGCTATTGAGCATGTCCTTGCTTTCGTTGCTGCATGACCAGTTGATCGCTTCGGCGGGTATGTTGCTGTAGCTGTAACAGGTGTGCCGCTCC‑‑‑ACCGGc                                                                                                                                        >  2:985046/1‑129 (MQ=255)                                 ccATCGGCGCACCGCGCTATTTTGCTCTTTTCGCTATTGAGCATGTCCTTGCTTTCGTTGCTGCATGACCAGTTGATCGCTTCGGCGGGTATGTTGCTGTAGCTGTAACAGGTGTGCCGCTCC‑‑‑ACCGGc                                                                                                                                        <  1:985046/129‑1 (MQ=255)                                   aTCGGCGCACCGCGCTATTTTGCTCTTTTCGCTATTGAGCATGTCCTTGCTTTCGTTGCTGCATGACCAGTTGATCGCTTCGGCGGGTATGTTGCTGTAGCTGTAACAGGTGTGCCGCTCC‑‑‑ACCGGCGTCACGGCGTCGCTGGAGGAGCg                                                                                                                 >  2:1133307/1‑150 (MQ=255)                                     ctgacgagggccttgtgccctggaggtggaaaatgcgtgttcctgccttgatgatgatggttgccagcctggccagcggccaggtctgggccgaagcttgcaatgtgctgactCGCTCC‑‑‑ACCGGCGTCACGGCGTCGCTGGAGGAGCGAg                                                                                                               >  2:1311337‑M1/114‑150 (MQ=255)                                               cgcTATTTTGCTCTTTTCGCTATTGAGCATGTCCTTGCTTTCGTTGCTGCATGACCAGTTGATCGCTTCGGCGGGTATGTTGCTGTAGCTGTAACAGGTGTGCCGCTCC‑‑‑ACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACAtt                                                                                                     <  2:297313/150‑1 (MQ=255)                                                    ttttGCTCTTTTCGCTATTGAGCATGTCCTTGCTTTCGTTGCTGCATGACCAGTTGATCGCTTCGGCGGGTATGTTGCTGTAGCTGTAACAGGTGTGCCGCTCC‑‑‑ACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAg                                                                                                >  2:1495015/1‑150 (MQ=255)                                                            ttttCGCTATTGAGCATGTCCTTGCTTTCGTTGCTGCATGACCAGTTGATCGCTTCGGCGGGTATGTTGCTGTAGCTGTAACAGGTGTGCCGCTCC‑‑‑ACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCa                                                                                                            <  2:674688/130‑1 (MQ=255)                                                            ttttCGCTATTGAGCATGTCCTTGCTTTCGTTGCTGCATGACCAGTTGATCGCTTCGGCGGGTATGTTGCTGTAGCTGTAACAGGTGTGCCGCTCC‑‑‑ACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCa                                                                                                            >  1:674688/1‑130 (MQ=255)                                                            ttttCGCTATTGAGCATGTCCTTGCTTTCGTTGCTGCATGACCAGTTGATCGCTTCGGCGGGTATGTTGCTGTAGCTGTAACAGGTGTGCCGCTCC‑‑‑ACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGcc                                                                                        >  1:105826/1‑150 (MQ=255)                                                                   tATTGAGCATGTCCTTGCTTTCGTTGCTGCATGACCAGTTGATCGCTTCGGCGGGTATGTTGCTGTAGCTGTAACAGGTGTGCCGCTCC‑‑‑ACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCt                                                                                 >  1:728883/1‑150 (MQ=255)                                                                     ttGAGCATGTCCTTGCTCTCGTTGCTGCATGACCAGTTGATCGCTTCGGCGGGTATGTTGCTGTAGCTGTAACAGGTGTGCCGCTCC‑‑‑ACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTgg                                                                               <  1:84070/150‑1 (MQ=255)                                                                        aGCATGTCCTTGCTTTCGTTGCTGCATGACCAGTTGATCGCTTCGGCGGGTATGTTGCTGTAGCTGTAACAGGTGTGCCGCTCC‑‑‑ACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCg                                                                            >  2:142443/1‑150 (MQ=255)                                                                         gCATGTCCTTGCTTTCGTTGCTGCATGACCAGTTGATCGCTTCGGCGGGTATGTTGCTGTAGCTGTAACAGGTGTGCCGCTCC‑‑‑ACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGc                                                                           <  1:954597/150‑1 (MQ=255)                                                                           aTGTCCTTGCTTTCGTTGCTGCATGACCAGTTGATCGCTTCGGCGGGTATGTTGCTGTAGCTGTAACAGGTGTGCCGCTCC‑‑‑ACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTg                                                                         <  1:1133307/150‑1 (MQ=255)                                                                                cTTGCTTTCGTTGCTGCATGACCAGTTGATCGCTTCGGCGGGTATGTTGCTGTAGCTGTAACAGGTGTGCCGCTCC‑‑‑ACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAg                                                                    >  1:501843/1‑150 (MQ=255)                                                                                 ttGCTTTCGTTGCTGCATGACCAGTTGATCGCTTCGGCGGGTATGTTGCTGTAGCTGTAACAGGTGTGCCGCTCC‑‑‑ACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAgg                                                                   <  1:240411/150‑1 (MQ=255)                                                                                  ccttgatgatgatggttgccagcctggccagcggccaggtctgggccgaagcttgcaatgtgctgactCGCTCC‑‑‑ACCGGCGTCACGGCGTCGCTg                                                                                                                         >  2:1385500‑M1/69‑95 (MQ=255)                                                                                  ccttgatgatgatggttgccagcctggccagcggccaggtctgggccgaagcttgcaatgtgctgactCGCTCC‑‑‑ACCGGCGTCACGGCGTCGCTg                                                                                                                         <  1:1385500‑M1/27‑1 (MQ=255)                                                                                    cTTTCGTTGCTGCATGACCAGTTGATCGCTTCGGCGGGTATGTTGCTGTAGCTGTAACAGGTGTGCCGc                                                                                                                                                    >  2:1028530/1‑69 (MQ=255)                                                                                    cTTTCGTTGCTGCATGACCAGTTGATCGCTTCGGCGGGTATGTTGCTGTAGCTGTAACAGGTGTGCCGc                                                                                                                                                    <  1:1028530/69‑1 (MQ=255)                                                                                         gTTGCTGCATGACCAGTTGATCGCTTCGGCGGGTATGTTGCTGTAGCTGTAACAGGTGTGCCGCTCC‑‑‑ACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGTCGCTGGCCAg                                                                    >  2:287060/1‑141 (MQ=255)                                                                                         gTTGCTGCATGACCAGTTGATCGCTTCGGCGGGTATGTTGCTGTAGCTGTAACAGGTGTGCCGCTCC‑‑‑ACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAg                                                                    <  1:287060/141‑1 (MQ=255)                                                                                         gTTGCTGCATGACCAGTTGATCGCTTCGGCGGGTATGTTGCTGTAGCTGTAACAGGTGTGCCGCTCC‑‑‑ACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGGCTGGCAAc                                                           >  2:574206/1‑150 (MQ=255)                                                                                           tgctgcATGACCAGTTGATCGCTTCGGCGGGTATGTTGCTGTAGCTGTAACAGGTGTGCCGCTCC‑‑‑ACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGGCTgggccgaa                                                         <  1:1166715/150‑7 (MQ=255)                                                                                             ctgcATGACCAGTTGATCGCTTCGGCGGGTATGTTGCTGTAGCTGTAACAGGTGTGCCGCTCC‑‑‑ACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGGCTGGCAACcatc                                                       <  2:990500/150‑1 (MQ=255)                                                                                                 ttgccagcctggccagcggccaggtctgggccgaagcttgcaatgtgctgactCGCTCCTCCACCGGCGTCACGGCGTCGCTggag                                                                                                                      >  1:36000‑M1/54‑86 (MQ=255)                                                                                                 ttgccagcctggccagcggccaggtctgggccgaagcttgcaatgtgctgactCGCTCCTCCACCGGCGTCACGGCGTCGCTggag                                                                                                                      <  2:36000‑M1/33‑1 (MQ=255)                                                                                                 aTGACCAGTTGATCGCTTCGGCGGGTATGTTGCTGTAGCTGTAACAGGTGTGCCGCTCC‑‑‑ACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGGCTGGCAACcatcatca                                                   <  2:287353/150‑1 (MQ=255)                                                                                                      cAGTTGATCGCTTCGGCGGGTATGTTGCTGTAGCTGTAACAGGTGTGCCGCTCC‑‑‑ACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGcc                                                                             <  1:916342/119‑1 (MQ=255)                                                                                                      cAGTTGATCGCTTCGGCGGGTATGTTGCTGTAGCTGTAACAGGTGTGCCGCTCC‑‑‑ACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGcc                                                                             >  2:916342/1‑119 (MQ=255)                                                                                                         ttGATCGCTTCGGCGGGTATGTTGCTGTAGCTGTAACAGGTGTGCCGCTCC‑‑‑ACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGc                                                                              <  2:992786/115‑1 (MQ=255)                                                                                                         ttGATCGCTTCGGCGGGTATGTTGCTGTAGCTGTAACAGGTGTGCCGCTCC‑‑‑ACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGc                                                                              >  1:992786/1‑115 (MQ=255)                                                                                                             tCGCTTCGGCGGGTATGTTGCTGTAGCTGTAACAGGTGTGCCGCTCC‑‑‑ACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGGCTGGCAACCATCATCATCAAGGCAGGaa                                       >  2:1376145/1‑150 (MQ=255)                                                                                                             tCGCTTCGGCGGGTATGTTGCTGTAGCTGTAACAGGTGTGCCGCTCC‑‑‑ACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGGCTGGCAACCATCATCATCAAGGCAGGaa                                       >  2:831145/1‑150 (MQ=255)                                                                                                             tCGCTTCGGCGGGTATGTTGCTGTAGCTGTAACAGGTGTGCCGCTCC‑‑‑ACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGGCTGGCAACCATCATCATCAAGGCAGCaa                                       <  2:274704/150‑1 (MQ=255)                                                                                                               gCTTCGGCGGGTATGTTGCTGTAGCTGTAACAGGTGTGCCGCTCC‑‑‑ACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGGCTGGCAACCATCATCATCAAGGCAGGAaca                                     >  2:1562167/1‑150 (MQ=255)                                                                                                                cTTCGGCGGGTATGTTGCTGTAGCTGTAACAGGTGTGCCGCTCC‑‑‑ACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGGCTGGCAACCATCATCATCAAGGCAGGAacac                                    <  1:1495015/150‑1 (MQ=255)                                                                                                                         gTATGTTGCTGTAGCTGTAACAGGTGTGCCGCTCC‑‑‑ACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGGCTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTcc                           >  1:1263192/1‑150 (MQ=255)                                                                                                                          tATGTTGCTGTAGCTGTAACAGGTGTGCCGCTCC‑‑‑ACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGa                                                                                    <  2:1490316/92‑1 (MQ=255)                                                                                                                          tATGTTGCTGTAGCTGTAACAGGTGTGCCGCTCC‑‑‑ACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGa                                                                                    >  1:1490316/1‑92 (MQ=255)                                                                                                                           aTGTTGCTGTAGCTGTAACAGGTGTGCCGCTCC‑‑‑ACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGGCTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCAc                         <  1:1562167/150‑1 (MQ=255)                                                                                                                              ttGCTGTAGCTGTAACAGGTGTGCCGCTCC‑‑‑ACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGGCTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTcc                           <  1:381929/145‑1 (MQ=255)                                                                                                                              ttGCTGTAGCTGTAACAGGTGTGCCGCTCC‑‑‑ACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGGCTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTcc                           >  2:381929/1‑145 (MQ=255)                                                                                                                                gctgtagctgtaACAGGTGTGCCGCTCC‑‑‑ACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGGCTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCa                    <  2:501843/150‑1 (MQ=255)                                                                                                                                gctgtagctgtaACAGGTGTGCCGCTCC‑‑‑ACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGGCTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCa                    >  2:323453/1‑150 (MQ=255)                                                                                                                                 ctgtagctgtgACAGGTGTGCCGCTCC‑‑‑ACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGGCTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAg                   >  1:1033211/1‑150 (MQ=255)                                                                                                                                      gctgtaACAGGTGTGCCGCTCC‑‑‑ACCGGCGTCGCGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGGCTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAGGGcac              >  2:1198642/1‑150 (MQ=255)                                                                                                                                        tgtaACAGGTGTGCCGCTCC‑‑‑ACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGGCTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAGGGCACaa            <  2:728883/150‑1 (MQ=255)                                                                                                                                        tgtaACAGGTGTGCCGCTCC‑‑‑ACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGGCTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAGGGCACaa            >  1:1344204/1‑150 (MQ=255)                                                                                                                                            aCAGGTGTGCCGCTCC‑‑‑ACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGGCTGGCAACcatcatca                                                   >  2:134763/1‑107 (MQ=255)                                                                                                                                            aCAGGTGTGCCGCTCC‑‑‑ACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGGCTGGCAACcatcatca                                                   <  1:134763/107‑1 (MQ=255)                                                                                                                                            aCAGGTGTGCCGCTCC‑‑‑ACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGGCTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAGGGCACAAg           >  1:789045/1‑147 (MQ=255)                                                                                                                                            aCAGGTGTGCCGCTCC‑‑‑ACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGGCTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAGGGCACAAg           <  2:789045/147‑1 (MQ=255)                                                                                                                                               ggTGTGCCGCTCC‑‑‑ACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGGCTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAGGGCACAAGGCCCTc     <  2:105826/150‑1 (MQ=255)                                                                                                                                                  gtgCCGCTCC‑‑‑ACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGGCTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAGGGCACAAGGCCCTCGTc  >  2:568999/1‑150 (MQ=255)                                                                                                                                                   tgCCGCTCC‑‑‑ACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGGCTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAg                   >  1:1376874/1‑132 (MQ=255)                                                                                                                                                   tgCCGCTCC‑‑‑ACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGGCTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAg                   <  2:1376874/132‑1 (MQ=255)                                                                                                                                                      CGCTCC‑‑‑ACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGGCTGGCaa                                                            <  2:1340520‑M1/88‑1 (MQ=255)                                                                                                                                                      CGCTCC‑‑‑ACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGGCTGGCaa                                                            >  1:1340520‑M1/1‑88 (MQ=255)                                                                                                                                                      |                                                                                                                                                     GGGTCAGTGGAGCGATGCAGCTGCCGACACTCCCATCGGCGCACCGCGCTATTTTGCTCTTTTCGCTATTGAGCATGTCCTTGCTTTCGTTGCTGCATGACCAGTTGATCGCTTCGGCGGGTATGTTGCTGTAGCTGTAACAGGTGTGCCGCTCC‑‑‑ACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGGCTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAGGGCACAAGGCCCTCGTC  >  NC_002947/3697267‑3697561

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.