New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3793639 =	49 (0.820)	3 (0.050)	3/228	NT	6.6%	coding (927/1191 nt)	PP_3355	beta‑ketothiolase
	?	NC_002947	3793672 =	39 (0.690)					coding (894/1191 nt)	PP_3355	beta‑ketothiolase

TGGACCAGGCGCAGACCTGTAGCGGCCAATGGGTGACCAAGGGCGATAGCGCCGCCATGGACATTGAGCTTGTCCACATCGAGTTCGAGCGCCTGGGCCACCGCCAGCACTTGGGCGGCCTGGGCCTCGTTGATTTCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGCCGGCCCGATGCCCATGAGGCCGGGCGGCACGCCAACAGCCGTGGCCATCAGCAAGCGCGCCAAAGGCGGATGAGTGCAATCGGAGTAGCGCGTGAC  >  NC_002947/3793490‑3793785                                                                                                                                                      |                                                                                                                                                   gttgcgcggtggtcgatggcgcggcggcagccttggtcacgcgctactccgattgcactcatccgcctttggcgcgcttgctgatggccacggctgttggcgtgccgcccggcctcatgggcatcgggccggcgccggccattaccttgc                                                                                                                                                    >  1:1109196‑M1/150‑150 (MQ=255)    aCCAGGCGCAGACCTGTAGCGGCCAATGGGTGACCAAGGGCGATAGCGCCGCCATGGACATTGAGCTTGTCCACATCGAGTTCGAGCGCCTGGGCCACCGCCAGCACTTGGGCGGCCTGGGCCTCGTTGATTTCCAGGCGGTCGATCTGc                                                                                                                                                 <  2:1579407/150‑1 (MQ=255)      gcggtggtcgatggcgcggcggcagccttggtcacgcgctactccgattgcactcatccgcctttggcgcgcttgctgatggccacggctgttggcgtgccgcccggcctcatgggcatcgggccggcgccggccattaccttgCTGCTc                                                                                                                                               >  2:678259‑M1/145‑150 (MQ=255)       aGGCGCAGACCTGTAGCGGCCAATGGGTGACCAAGGGCGATAGCGCCGCCATGGACATTGAGCTTGTCCACATCGAGTTCGAGCGCCTGGGCCACCGCCAGCACTTGGGCGGCCTGGGCCTCGTTGATTTCCAGGCGGTCGATCTGCTcc                                                                                                                                              <  2:1236621/150‑1 (MQ=255)                  tGTAGCGGCCAATGGGTGACCAAGGGCGATAGCGCCGCCATGGACATTGAGCTTGTCCACATCGAGTTCGAGCGCCTGGGCCACCGCCAGCACTTGGGCGGCCTGGGCCTCGTTGATTTCCAGGCGGTCGATCTGCTCCAGGCGCAGGcc                                                                                                                                   >  2:394733/1‑150 (MQ=255)                    tAGCGGCCAATGGGTGACCAAGGGCGATAGCGCCGCCATGGACATTGAGCTTGTCCACATCGAGTTCGAGCGCCTGGGCCACCGCCAGCACTTGGGCGGCCTGGGCCTCGTTGATTTCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGc                                                                                                                                 <  2:503096/150‑1 (MQ=255)                            aaTGGGTGACCAAGGGCGATAGCGCCGCCATGGACATTGAGCTTGTCCACATCGAGTTCGAGCGCCTGGGCCACCGCCAGCACTTGGGCGGCCTGGGCCTCGTTGATTTCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCt                                                                                                                                <  2:7131/143‑1 (MQ=255)                            aaTGGGTGACCAAGGGCGATAGCGCCGCCATGGACATTGAGCTTGTCCACATCGAGTTCGAGCGCCTGGGCCACCGCCAGCACTTGGGCGGCCTGGGCCTCGTTGATTTCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCt                                                                                                                                >  1:7131/1‑143 (MQ=255)                             aTGGGTGACCAAGGGCGATAGCGCCGCCATGGACATTGAGCTTGTCCACATCGAGTTCGAGCGCCTGGGCCACCGCCAGCACTTGGGCGGCCTGGGCCTCGTTGATTTCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGa                                                                                                                        <  1:1370129/150‑1 (MQ=255)                             aTGGGTGACCAAGGGCGATAGCGCCGCCATGGACATTGAGCTTGTCCACATCGAGTTCGAGCGCCTGGGCCACCGCCAGCACTTGGGCGGCCTGGGCCTCGTTGATTTCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGa                                                                                                                        <  2:1227336/150‑1 (MQ=255)                                 gTGACCAAGGGCGATAGCGCCGCCATGGACATTGAGCTTGTCCACATCGAGTTCGAGCGCCTGGGCCACCGCCAGCACTTGGGCGGCCTGGGCCTCGTTGATTTCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGagcag                                                                                                                    <  2:1332609/150‑1 (MQ=255)                                  tGACCAAGGGCGATAGCGCCGCCATGGACATTGAGCTTGTCCACATCGAGTTCGAGCGCCTGGGCCACCGCCAGCACTTGGGCGGCCTGGGCCTCGTTGATTTCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGagcagc                                                                                                                   >  1:549015/1‑150 (MQ=255)                                   gACCAAGGGCGATAGCGCCGCCATGGACATTGAGCTTGTCCACATCGAGTTCGAGCGCCTGGGCCACCGCCAGCACTTGGGCGGCCTGGGCCTCGTTGATTTCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTg                                                                                                                               >  2:1467157/1‑137 (MQ=255)                                   gACCAAGGGCGATAGCGCCGCCATGGACATTGAGCTTGTCCACATCGAGTTCGAGCGCCTGGGCCACCGCCAGCACTTGGGCGGCCTGGGCCTCGTTGATTTCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTg                                                                                                                               <  1:1467157/137‑1 (MQ=255)                                     tcacgcgctactccgattgcactcatccgcctttggcgcgcttgctgatggccacggctgttggcgtgccgcccggcctcatgggcatcgggccggcgccggccattaccttgCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAg                                                                                                                >  1:842937‑M1/114‑150 (MQ=255)                                     ccAAGGGCGATAGCGCCGCCATGGACATTGAGCTTGTCCACATCGAGTTCGAGCGCCTGGGCCACCGCCAGCACTTGGGCGGCCTGGGCCTCGTTGATTTCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAg                                                                                                                <  1:1584782/150‑1 (MQ=255)                                      cAAGGGCGATAGCGCCGCCATGGACATTGAGCTTGTCCACATCGAGTTCGAGCGCCTGGGCCACCGCCAGCACTTGGGCGGCCTGGGCCTCGTTGATTTCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAgg                                                                                                               <  2:1027474/150‑1 (MQ=255)                                      cAAGGGCGATAGCGCCGCCATGGACATTGAGCTTGTCCACATCGAGTTCGAGCGCCTGGGCCACCGCCAGCACTTGGGCGGCCTGGGCCTCGTTGATTTCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAgg                                                                                                               >  1:140248/1‑150 (MQ=255)                                           gCGATAGCGCCGCCATGGACATTGAGCTTGTCCACATCGAGTTCGAGCGCCTGGGCCACCGCCAGCACTTGGGCGGCCTGGGCCTCGTTGATTTCCAGGCGGTCGATCTGCTCCAg                                                                                                                                            >  1:354482/1‑116 (MQ=255)                                           gCGATAGCGCCGCCATGGACATTGAGCTTGTCCACATCGAGTTCGAGCGCCTGGGCCACCGCCAGCACTTGGGCGGCCTGGGCCTCGTTGATTTCCAGGCGGTCGATCTGCTCCAg                                                                                                                                            <  2:354482/116‑1 (MQ=255)                                                  cgccgcCATGGACATTGAGCTTGTCCACATCGAGTTCGAGCGCCTGGGCCACCGCCAGCACTTGGGCGGCCTGGGCCTCGTTGATTTCCAGGCGGTCGATCTGc                                                                                                                                                 >  1:325575/1‑104 (MQ=255)                                                  cgccgcCATGGACATTGAGCTTGTCCACATCGAGTTCGAGCGCCTGGGCCACCGCCAGCACTTGGGCGGCCTGGGCCTCGTTGATTTCCAGGCGGTCGATCTGc                                                                                                                                                 <  2:325575/104‑1 (MQ=255)                                                   gccgccATGGACATTGAGCTTGTCCACATCGAGTTCGAGCGCCTGGGCCACCGCCAGCACTTGGGCGGCCTGGGCCTCGTTGATTTCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGgccggcgc                                                                                                  >  2:539314/1‑150 (MQ=255)                                                              cATTGAGCTTGTCCACATCGAGTTCGAGCGCCTGGGCCACCGCCAGCACTTGGGCGGCCTGGGCCTCGTTGATTTCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGCCGGCCCGATGc                                                                                       <  1:394733/150‑1 (MQ=255)                                                                ttGAGCTTGTCCACATCGAGTTCGAGCGCCTGGGCCACCGCCAGCACTTGGGCGGCCTGGGCCTCGTTGATTTCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGCCGGCCCGATGccc                                                                                     <  2:140248/150‑1 (MQ=255)                                                                  gAGCTTGTCCACATCGAGTTCGAGCGCCTGGGTCACCGCCAGCACTTGGGCGGCCTGGGCCTCGTTGATTTCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGCCGGCCCGATGCCCAt                                                                                   <  1:822373/150‑1 (MQ=255)                                                                   aGCTTGTCCACATCGAGTTCGAGCGCCTGGGCCACCGCCAGCACTTGGGCGGCCTGGGCCTCGTTGATTTCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGCCGGCCCGATGCCCATg                                                                                  >  2:1180570/1‑150 (MQ=255)                                                                    tttggcgcgcttgctgatggccacggctgttggcgtgccgcccggcctcatgggcatcgggccggcgccggccattaccttgCTGCTCCAGGCGCAGGCCGCTGCGCTCGagca                                                                                                                     <  1:447466‑M1/32‑1 (MQ=255)                                                                    tttggcgcgcttgctgatggccacggctgttggcgtgccgcccggcctcatgggcatcgggccggcgccggccattaccttgCTGCTCCAGGCGCAGGCCGCTGCGCTCGagca                                                                                                                     >  2:447466‑M1/83‑114 (MQ=255)                                                                    gCTTGTCCACATCGAGTTCGAGCGCCTGGGCCACCGCCAGCACTTGGGCGGCCTGGGCCTCGTTGATTTCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGa                                                                                                                        >  2:575532/1‑111 (MQ=255)                                                                    gCTTGTCCACATCGAGTTCGAGCGCCTGGGCCACCGCCAGCACTTGGGCGGCCTGGGCCTCGTTGATTTCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGa                                                                                                                        <  1:575532/111‑1 (MQ=255)                                                                    gCTTGTCCACATCGAGTTCGAGCGCCTGGGCCACCGCCAGCACTTGGGCGGCCTGGGCCTCGTTGATTTCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGCCGGCCCGATGCCCATGa                                                                                 <  1:1180570/150‑1 (MQ=255)                                                                         tCCACATCGAGTTCGAGCGCCTGGGCCACCGCCAGCACTTGGGCGGCCTGGGCCTCGTTGATTTCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGCCGGCCCGATGCCCATGAGGCCg                                                                            >  1:568294/1‑150 (MQ=255)                                                                           cacaTCGAGTTCGAGCGCCTGGGCCACCGCCAGCACTTGGGCGGCCTGGGCCTCGTTGATTTCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGCCGGCCCGATGCCCATGAGGCCggg                                                                          >  1:627350/1‑150 (MQ=255)                                                                            acaTCGAGTTCGAGCGCCTGGGCCACCGCCAGCACTTGGGCGGCCTGGGCCTCGTTGATTTCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGCCGGCCCGATGCCCATGAGGCCGggc                                                                         >  1:937333/1‑150 (MQ=255)                                                                              aTCGAGTTCGAGCGCCTGGGCCACCGCCAGCACTTGGGCGGCCTGGGCCTCGTTGATTTCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGCCGGCCCGATGCCCATGAGGCCGggcgg                                                                       >  1:1112024/1‑150 (MQ=255)                                                                                         gcgcCTGGGCCACCGCCAGCACTTGGGCGGCCTGGGCCTCGTTGATTTCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGCCGGCCCGATGCCCATGAGGCCGGGCGGCACGCCAACAg                                                            >  2:98510/1‑150 (MQ=255)                                                                                             cTGGGCCACCGCCAGCACTTGGGCGGCCTGGGCCTCGTTGATTTCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGCCGGCCCGATGCCCATGAGGCCGGGCGGCACGCCAACAGCCGt                                                        >  1:1227687/1‑150 (MQ=255)                                                                                                      cGCCAGCACTTGGGCGGCCTGGGCCTCGTTGATTTCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGCCGGCCCGATGCCCATGAGGCCGGGCGGCACGCCAACAGCCGTGGCCATCAg                                               <  2:1110238/150‑1 (MQ=255)                                                                                                             aCTTGGGCGGCCTGGGCCTCGTTGATTTCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGCCGGCCCGATGCCCATGAGGCCGGGCGGCACGCCAACAGCCGTGGCCATCAGCAAgcgc                                        <  2:285974/150‑1 (MQ=255)                                                                                                               ttGGGCGGCCTGGGCCTCGTTGATTTCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGCCGGCCCGATGCCCATGAGGCCGGGCGGCACGCCAACAGCCGTGGCCATCAGCAAgcgcgc                                      <  2:1227687/150‑1 (MQ=255)                                                                                                                      gcCTGGGCCTCGTTGATTTCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGCCGGCCCGATGCCCATGAGGCCGGGCGGCACGCCAACAGCCGTGGCCATCAGCAAGCGCGCCAAAGGc                               <  1:1236611/150‑1 (MQ=255)                                                                                                                         tGGGCCTCGTTGATTTCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGCCGGCCCGATGCCTATGAGGCCGGGCGGCACGCCAACAGCCGTGGCCATCAGCAAGCGCGCCAAAGGCggg                            >  2:1352345/1‑149 (MQ=255)                                                                                                                           ggCCTCGTTGATTTCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGCCGGCCCGATGCCCATGAGGCCGGGCGGCACGCCAACAGCCGTGGCCATCAGCAAGCGCGCCAAAGGCGGATg                          >  1:12941/1‑150 (MQ=255)                                                                                                                            gCCTCGTTGATTTCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGCCGGCCCGATGCCCATGAGGCCGGGCGGCACGCCAACAGCCGTGGCCATCAGCAAGCGCGCCAAAGGCGGATGa                         <  2:1112024/150‑1 (MQ=255)                                                                                                                            gCCTCGTTGATTTCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGCCGGCCCGATGCCCATGAGGCCGGGCGGCACGCCAACAGCCGTGGCCATCAGCAAGCGCGCCAAAGGCGGATGa                         <  1:334059/150‑1 (MQ=255)                                                                                                                                 gTTGATTTCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGCCGGCCCGATGCCCATGAGGCCGGGCGGCACGCCAACAGCCGTGGCCATCAGCAAGCGCGCCAAAGGCGGATGAGTGCa                    >  2:247296/1‑150 (MQ=255)                                                                                                                                 gTTGATTTCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGCCGGCCCGATGCCCATGAGGCCGGGCGGCACGCCAACAGCCGTGGCCATCAGCAAGCGCGCCAAAGGCGGATGAGTGCa                    >  2:503280/1‑150 (MQ=255)                                                                                                                                   tGATTTCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGCCGGCCCGATGCCCATGAGGCCGGGCGGCACGCCAACAGCCGTGGCCATCAGCAAGCGCGCCAAAGGCGGATGAGTGCAAt                  >  1:1538942/1‑150 (MQ=255)                                                                                                                                    gATTTCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGCCGGCCCGATGCCCATGAGGCCGGGCGGCACGCCAACAGCCGTGGCCATCAGCAAGCGCGCCAAAGGCGGATGAGTGCAATc                 <  1:617362/150‑1 (MQ=255)                                                                                                                                    gATTTCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGCCGGCCCGATGCCCATGAGGCCGGGCGGCACGCCAACAGCCGTGGCCATCAGCAAGCGCGCCAAAGGCGGATGAGTGCAATc                 <  1:98510/150‑1 (MQ=255)                                                                                                                                      tttCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGGCGGCCCGATGCCTATGAGGCCGGGCTGCACTCCAACAGCCGTGGCCTGCAGCAAGCGCGCCAAAGGCGGATTAGTGAAATCgg               >  1:1155510/1‑150 (MQ=255)                                                                                                                                      tttCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGCCGGCCCGATGCCCATGAGGCCGGGCGGCACGCCAACAGCCGTGGCCATCAGCAAGCGCGCCAAAGGCGGATGAGTGCAATCgg               <  1:991414/150‑1 (MQ=255)                                                                                                                                      tttCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGCCGGCCCGATGCCCATGAGGCCGGGCGGCACGCCAACAGCCGTGGCCATCAGCAAGCGCGCCAAAGGCGGATGAGTGCAATCgg               >  2:991414/1‑150 (MQ=255)                                                                                                                                       ttCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGCCGGCCCGATGCCCATGAGGCCGGGCGGCACGCCAACAGCCGTGGCCATCAGCAAGCGCGCCAAAGGCGGATGAGTGCAATCGGa              <  2:627350/150‑1 (MQ=255)                                                                                                                                                gTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGCCGGCCCGATGCCCATGAGGCCGGGCGGCACGCCAACAGCCGTGGCCATCAGCAAGCGCGCCAAAGGCg                              <  1:1492910/125‑1 (MQ=255)                                                                                                                                                gTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGCCGGCCCGATGCCCATGAGGCCGGGCGGCACGCCAACAGCCGTGGCCATCAGCAAGCGCGCCAAAGGCg                              >  2:1492910/1‑125 (MQ=255)                                                                                                                                                   gATCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGCCGGCCCGATGCCCATGAGGCCGGGCGGCACGCCAACAGCCGTGGCCATCAGCAAGCGCGCCAAAGGCGGATGAGTGCAATCGGAGTAGCGCGTGAc  <  2:568294/150‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                   TGGACCAGGCGCAGACCTGTAGCGGCCAATGGGTGACCAAGGGCGATAGCGCCGCCATGGACATTGAGCTTGTCCACATCGAGTTCGAGCGCCTGGGCCACCGCCAGCACTTGGGCGGCCTGGGCCTCGTTGATTTCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGCCGGCCCGATGCCCATGAGGCCGGGCGGCACGCCAACAGCCGTGGCCATCAGCAAGCGCGCCAAAGGCGGATGAGTGCAATCGGAGTAGCGCGTGAC  >  NC_002947/3793490‑3793785

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.