New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3793639 =	49 (0.820)	3 (0.050)	3/228	NT	6.6%	coding (927/1191 nt)	PP_3355	beta‑ketothiolase
	?	NC_002947	3793672 =	39 (0.690)					coding (894/1191 nt)	PP_3355	beta‑ketothiolase

TGACCAAGGGCGATAGCGCCGCCATGGACATTGAGCTTGTCCACATCGAGTTCGAGCGCCTGGGCCACCGCCAGCACTTGGGCGGCCTGGGCCTCGTTGATTTCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGCCGGCCCGATGCCCATGAGGCCGGGCGGCACGCCAACAGCCGTGGCCATCAGCAAGCGCGCCAAAGGCGGATGAGTGCAATCGGAGTAGCGCGTGACCAAGGCTGCCGCCGCGCCATCGACCACCGCGCAACT  >  NC_002947/3793523‑3793821                                                                                                                                                      |                                                                                                                                                      tGACCAAGGGCGATAGCGCCGCCATGGACATTGAGCTTGTCCACATCGAGTTCGAGCGCCTGGGCCACCGCCAGCACTTGGGCGGCCTGGGCCTCGTTGATTTCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGagcagc                                                                                                                                                       >  1:549015/1‑150 (MQ=255)    tcacgcgctactccgattgcactcatccgcctttggcgcgcttgctgatggccacggctgttggcgtgccgcccggcctcatgggcatcgggccggcgccggccattaccttgCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAg                                                                                                                                                    >  1:842937‑M1/114‑150 (MQ=255)    ccAAGGGCGATAGCGCCGCCATGGACATTGAGCTTGTCCACATCGAGTTCGAGCGCCTGGGCCACCGCCAGCACTTGGGCGGCCTGGGCCTCGTTGATTTCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAg                                                                                                                                                    <  1:1584782/150‑1 (MQ=255)     cAAGGGCGATAGCGCCGCCATGGACATTGAGCTTGTCCACATCGAGTTCGAGCGCCTGGGCCACCGCCAGCACTTGGGCGGCCTGGGCCTCGTTGATTTCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAgg                                                                                                                                                   <  2:1027474/150‑1 (MQ=255)     cAAGGGCGATAGCGCCGCCATGGACATTGAGCTTGTCCACATCGAGTTCGAGCGCCTGGGCCACCGCCAGCACTTGGGCGGCCTGGGCCTCGTTGATTTCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAgg                                                                                                                                                   >  1:140248/1‑150 (MQ=255)                  gccgccATGGACATTGAGCTTGTCCACATCGAGTTCGAGCGCCTGGGCCACCGCCAGCACTTGGGCGGCCTGGGCCTCGTTGATTTCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGgccggcgc                                                                                                                                      >  2:539314/1‑150 (MQ=255)                             cATTGAGCTTGTCCACATCGAGTTCGAGCGCCTGGGCCACCGCCAGCACTTGGGCGGCCTGGGCCTCGTTGATTTCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGCCGGCCCGATGc                                                                                                                           <  1:394733/150‑1 (MQ=255)                               ttGAGCTTGTCCACATCGAGTTCGAGCGCCTGGGCCACCGCCAGCACTTGGGCGGCCTGGGCCTCGTTGATTTCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGCCGGCCCGATGccc                                                                                                                         <  2:140248/150‑1 (MQ=255)                                 gAGCTTGTCCACATCGAGTTCGAGCGCCTGGGTCACCGCCAGCACTTGGGCGGCCTGGGCCTCGTTGATTTCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGCCGGCCCGATGCCCAt                                                                                                                       <  1:822373/150‑1 (MQ=255)                                  aGCTTGTCCACATCGAGTTCGAGCGCCTGGGCCACCGCCAGCACTTGGGCGGCCTGGGCCTCGTTGATTTCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGCCGGCCCGATGCCCATg                                                                                                                      >  2:1180570/1‑150 (MQ=255)                                   gCTTGTCCACATCGAGTTCGAGCGCCTGGGCCACCGCCAGCACTTGGGCGGCCTGGGCCTCGTTGATTTCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGCCGGCCCGATGCCCATGa                                                                                                                     <  1:1180570/150‑1 (MQ=255)                                        tCCACATCGAGTTCGAGCGCCTGGGCCACCGCCAGCACTTGGGCGGCCTGGGCCTCGTTGATTTCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGCCGGCCCGATGCCCATGAGGCCg                                                                                                                >  1:568294/1‑150 (MQ=255)                                          cacaTCGAGTTCGAGCGCCTGGGCCACCGCCAGCACTTGGGCGGCCTGGGCCTCGTTGATTTCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGCCGGCCCGATGCCCATGAGGCCggg                                                                                                              >  1:627350/1‑150 (MQ=255)                                           acaTCGAGTTCGAGCGCCTGGGCCACCGCCAGCACTTGGGCGGCCTGGGCCTCGTTGATTTCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGCCGGCCCGATGCCCATGAGGCCGggc                                                                                                             >  1:937333/1‑150 (MQ=255)                                             aTCGAGTTCGAGCGCCTGGGCCACCGCCAGCACTTGGGCGGCCTGGGCCTCGTTGATTTCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGCCGGCCCGATGCCCATGAGGCCGggcgg                                                                                                           >  1:1112024/1‑150 (MQ=255)                                                        gcgcCTGGGCCACCGCCAGCACTTGGGCGGCCTGGGCCTCGTTGATTTCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGCCGGCCCGATGCCCATGAGGCCGGGCGGCACGCCAACAg                                                                                                >  2:98510/1‑150 (MQ=255)                                                            cTGGGCCACCGCCAGCACTTGGGCGGCCTGGGCCTCGTTGATTTCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGCCGGCCCGATGCCCATGAGGCCGGGCGGCACGCCAACAGCCGt                                                                                            >  1:1227687/1‑150 (MQ=255)                                                                     cGCCAGCACTTGGGCGGCCTGGGCCTCGTTGATTTCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGCCGGCCCGATGCCCATGAGGCCGGGCGGCACGCCAACAGCCGTGGCCATCAg                                                                                   <  2:1110238/150‑1 (MQ=255)                                                                            aCTTGGGCGGCCTGGGCCTCGTTGATTTCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGCCGGCCCGATGCCCATGAGGCCGGGCGGCACGCCAACAGCCGTGGCCATCAGCAAgcgc                                                                            <  2:285974/150‑1 (MQ=255)                                                                              ttGGGCGGCCTGGGCCTCGTTGATTTCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGCCGGCCCGATGCCCATGAGGCCGGGCGGCACGCCAACAGCCGTGGCCATCAGCAAgcgcgc                                                                          <  2:1227687/150‑1 (MQ=255)                                                                                     gcCTGGGCCTCGTTGATTTCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGCCGGCCCGATGCCCATGAGGCCGGGCGGCACGCCAACAGCCGTGGCCATCAGCAAGCGCGCCAAAGGc                                                                   <  1:1236611/150‑1 (MQ=255)                                                                                        tGGGCCTCGTTGATTTCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGCCGGCCCGATGCCTATGAGGCCGGGCGGCACGCCAACAGCCGTGGCCATCAGCAAGCGCGCCAAAGGCggg                                                                >  2:1352345/1‑149 (MQ=255)                                                                                          ggCCTCGTTGATTTCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGCCGGCCCGATGCCCATGAGGCCGGGCGGCACGCCAACAGCCGTGGCCATCAGCAAGCGCGCCAAAGGCGGATg                                                              >  1:12941/1‑150 (MQ=255)                                                                                           gCCTCGTTGATTTCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGCCGGCCCGATGCCCATGAGGCCGGGCGGCACGCCAACAGCCGTGGCCATCAGCAAGCGCGCCAAAGGCGGATGa                                                             <  1:334059/150‑1 (MQ=255)                                                                                           gCCTCGTTGATTTCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGCCGGCCCGATGCCCATGAGGCCGGGCGGCACGCCAACAGCCGTGGCCATCAGCAAGCGCGCCAAAGGCGGATGa                                                             <  2:1112024/150‑1 (MQ=255)                                                                                                gTTGATTTCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGCCGGCCCGATGCCCATGAGGCCGGGCGGCACGCCAACAGCCGTGGCCATCAGCAAGCGCGCCAAAGGCGGATGAGTGCa                                                        >  2:247296/1‑150 (MQ=255)                                                                                                gTTGATTTCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGCCGGCCCGATGCCCATGAGGCCGGGCGGCACGCCAACAGCCGTGGCCATCAGCAAGCGCGCCAAAGGCGGATGAGTGCa                                                        >  2:503280/1‑150 (MQ=255)                                                                                                  tGATTTCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGCCGGCCCGATGCCCATGAGGCCGGGCGGCACGCCAACAGCCGTGGCCATCAGCAAGCGCGCCAAAGGCGGATGAGTGCAAt                                                      >  1:1538942/1‑150 (MQ=255)                                                                                                   gATTTCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGCCGGCCCGATGCCCATGAGGCCGGGCGGCACGCCAACAGCCGTGGCCATCAGCAAGCGCGCCAAAGGCGGATGAGTGCAATc                                                     <  1:617362/150‑1 (MQ=255)                                                                                                   gATTTCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGCCGGCCCGATGCCCATGAGGCCGGGCGGCACGCCAACAGCCGTGGCCATCAGCAAGCGCGCCAAAGGCGGATGAGTGCAATc                                                     <  1:98510/150‑1 (MQ=255)                                                                                                     tttCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGGCGGCCCGATGCCTATGAGGCCGGGCTGCACTCCAACAGCCGTGGCCTGCAGCAAGCGCGCCAAAGGCGGATTAGTGAAATCgg                                                   >  1:1155510/1‑150 (MQ=255)                                                                                                     tttCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGCCGGCCCGATGCCCATGAGGCCGGGCGGCACGCCAACAGCCGTGGCCATCAGCAAGCGCGCCAAAGGCGGATGAGTGCAATCgg                                                   >  2:991414/1‑150 (MQ=255)                                                                                                     tttCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGCCGGCCCGATGCCCATGAGGCCGGGCGGCACGCCAACAGCCGTGGCCATCAGCAAGCGCGCCAAAGGCGGATGAGTGCAATCgg                                                   <  1:991414/150‑1 (MQ=255)                                                                                                      ttCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGCCGGCCCGATGCCCATGAGGCCGGGCGGCACGCCAACAGCCGTGGCCATCAGCAAGCGCGCCAAAGGCGGATGAGTGCAATCGGa                                                  <  2:627350/150‑1 (MQ=255)                                                                                                               gTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGCCGGCCCGATGCCCATGAGGCCGGGCGGCACGCCAACAGCCGTGGCCATCAGCAAGCGCGCCAAAGGCg                                                                  >  2:1492910/1‑125 (MQ=255)                                                                                                               gTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGCCGGCCCGATGCCCATGAGGCCGGGCGGCACGCCAACAGCCGTGGCCATCAGCAAGCGCGCCAAAGGCg                                                                  <  1:1492910/125‑1 (MQ=255)                                                                                                                 cttgctgctcgagcgcagcggcctgcgcctggagcagCAAGGTAATGGCCGGCGCCGGCCCGATGCCCATGAGGCCGGGCGGCACGCCAACAGCCGTGGCCATCAGCAAGCGCGCCAAAGGCGGATGAGTGCAATCGGAGTAGCGCGTGa                                       >  1:842937‑M2/38‑150 (MQ=255)                                                                                                                  gATCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGCCGGCCCGATGCCCATGAGGCCGGGCGGCACGCCAACAGCCGTGGCCATCAGCAAGCGCGCCAAAGGCGGATGAGTGCAATCGGAGTAGCGCGTGAc                                      <  2:568294/150‑1 (MQ=255)                                                                                                                      tgctcgagcgcagcggcctgcgcctggagcagCAAGGTAATGGCCGGCGCCGGCCCGATGCCCATGAGGCCGGGCGGCACGCCAACAGCCGTGGCCATCAGCAAGCGCGCCaaa                                                                      >  2:447466‑M2/33‑114 (MQ=255)                                                                                                                      tgctcgagcgcagcggcctgcgcctggagcagCAAGGTAATGGCCGGCGCCGGCCCGATGCCCATGAGGCCGGGCGGCACGCCAACAGCCGTGGCCATCAGCAAGCGCGCCaaa                                                                      <  1:447466‑M2/82‑1 (MQ=255)                                                                                                                        CTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGCCGGCCCGATGCCCATGAGGCCGGGCGGCATGCCAACAGCCGTGGCCATCAGCAAGCGCGCCAAAGGCGGATGAGTGCAATCGGAGTAGCGCGTGACCAAGGc                                <  2:685822‑M1/150‑1 (MQ=255)                                                                                                                         TCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGCCGGCCCGATGCCCATGAGGTTGGGCGGCACGCCAACAGCCGTGGCCATCAGCAAGCTCGCCAAAGGCGGATGAGTGCAATCGTAGTAGCGCGTGACCAAGGCt                               >  2:549015‑M1/1‑150 (MQ=255)                                                                                                                         TCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGCCGGCCCGATGCCCATGAGGCCGGGCGGCACGCCAACAGCCGTGGCCATCAGCAAGCGCGCCAAAGGCGGATGAGTGCAATCGGAGTAGCGCGTGACCAAGGCt                               <  2:1563161‑M1/150‑1 (MQ=255)                                                                                                                           cAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGCCGGCCCGATGCCCATGAGGCCGGGCGGCACGCCAACAGCCGTGGCCATc                                                                                     <  2:1039822/94‑1 (MQ=255)                                                                                                                           cAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGCCGGCCCGATGCCCATGAGGCCGGGCGGCACGCCAACAGCCGTGGCCATc                                                                                     >  1:1039822/1‑94 (MQ=255)                                                                                                                           cAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGCCGGCCCGATGCCCATGAGGCCGGGCGGCACGCCAACAGCCGTGGCCATCAGCAAGCGCGCCAAAGGCGGATGAGTg                                                          >  2:232653/1‑121 (MQ=255)                                                                                                                           cAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGCCGGCCCGATGCCCATGAGGCCGGGCGGCACGCCAACAGCCGTGGCCATCAGCAAGCGCGCCAAAGGCGGATGAGTg                                                          <  1:232653/121‑1 (MQ=255)                                                                                                                            aGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGCCGGCCCGATGCCCATGAGGCCGGGCGGCACGCCAACAGCCGTGGCCATCAGCAAGCGCGCCAAAGGCGGATGAGTGCAATCGGAGTAGCGCGTGACCAAGGCTgcc                            >  2:726016/1‑150 (MQ=255)                                                                                                                              gcgcAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGCCGGCCCGATGCCCATGAGGCCGGGCGGCACGCCAACAGCCGTGGCCATCAGCAAGCGCGCCAAAGGCGGATGAGTGCAATCGGAGTAGCGCGTGACCAAGGCTgccgc                          >  2:70891/1‑150 (MQ=255)                                                                                                                                    gCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGCCGGCCCGATGCCCATGAGGCCGGGCGGCACGCCAACAGCCGTGGCCATCAGCAAGCGCGCCAAAGGCGGATGAGTGCAATCGGAGTAGCGCGTGACCAAGGCTGCCGCCGCGcc                    <  2:1538942/150‑1 (MQ=255)                                                                                                                                                gagcagCAAGGTAATGGCCGGCGCCGGCCCGATGCCCATGAGGCCGGGCGGCACGCCAACAGCCGTGGCCATCAGCAAGCGCGCCAAAGGCGGATGAGTGCAATCGGAGTAGCGCGTGACCAAGGCTGCCGCCGCGCCATCGACCACcgc        >  2:678259‑M2/7‑150 (MQ=255)                                                                                                                                                     gCAAGGTAATGGCCGGCGCCGGCCCGATGCCCATGAGGCCGGGCGGCACGCCAACAGCCGTGGCCATCAGCAAGCGCGCCAAAGGCGGATGAGTGCAATCGGAGTAGCGCGTGACCAAGGCTGCCGCCGCGCCATCGACCACCGCGCAAc   >  1:1109196‑M2/2‑150 (MQ=255)                                                                                                                                                      caAGGTAATGGCCGGCGCCGGCCCGATGCCCATGAGGCCGGGCGGCACGCCAACAGCCGTGGCCATCAGCAAGCGCGCCAAAGGCGGATGAGTGCAATCGGAGTAGCGCGTGACCAAGGCTGCCGCCGCGCCATCGACCACCGCGCAACt  >  2:1408095/1‑150 (MQ=255)                                                                                                                                                      caAGGTAATGGCCGGCGCCGGCCCGATGCCCATGAGGCCGGGCGGCACGCCAACAGCCGTGGCCATCAGCAAGCGCGCCAAAGGCGGATGAGCGCAATCGGAGTAGCGCGTGACCAAgg                                 <  2:265898/119‑1 (MQ=255)                                                                                                                                                      caAGGTAATGGCCGGCGCCGGCCCGATGCCCATGAGGCCGGGCGGCACGCCAACAGCCGTGGCCATCAGCAAGCGCGCCAAAGGCGGATGAGCGCAATCGGAGTAGCGCGTGACCAAgg                                 >  1:265898/1‑119 (MQ=255)                                                                                                                                                      |                                                                                                                                                      TGACCAAGGGCGATAGCGCCGCCATGGACATTGAGCTTGTCCACATCGAGTTCGAGCGCCTGGGCCACCGCCAGCACTTGGGCGGCCTGGGCCTCGTTGATTTCCAGGCGGTCGATCTGCTCCAGGCGCAGGCCGCTGCGCTCGAGCAGCAAGGTAATGGCCGGCGCCGGCCCGATGCCCATGAGGCCGGGCGGCACGCCAACAGCCGTGGCCATCAGCAAGCGCGCCAAAGGCGGATGAGTGCAATCGGAGTAGCGCGTGACCAAGGCTGCCGCCGCGCCATCGACCACCGCGCAACT  >  NC_002947/3793523‑3793821

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.