New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3866633	58 (0.970)	6 (0.110)	6/226	NT	10.6%	coding (289/1020 nt)	PP_3415	LacI family transcriptional regulator
	?	NC_002947	= 3866641	47 (0.830)					coding (281/1020 nt)	PP_3415	LacI family transcriptional regulator

GGCAACCAGCATCTGCCGGGCAGCATCGCTGCGCTCGAAGCCGGTCAGCAAAATGCCGCAGGGCTGATAGGCCAGGTAATTGCGGATCAGGTTCTCTTCTTCGGCAAGGTCGTAATGATAGTTGCCGATCAGCACCTCTAGCCCACGAGGGCGCATGACCTCGTGAATGGCCTCCAGGGTGTCGATGAACAGTTGGTTGGACAACGACGGGATCAACACCACCACCGACTGGCTGCGTGCCGAGGCCAGCGCCCGGGCGGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCG  >  NC_002947/3866484‑3866781                                                                                                                                                      |                                                                                                                                                     ggCAACCAGCATCTGCCGGGCAGCATCGCTGCGCTCGAAGCCGGTCAGCAAAATGCCGCAGGGCTGATAGGCCAGGTAATTGCGGATCAGGTTCTCTTCTTCGGCAAGGTCGTAATGATAGTTGCCGATCAGCACCTCTAGCCCACGAGG                                                                                                                                                      <  2:1068579‑M1/150‑1 (MQ=255) ggCAACCAGCATCTGCCGGGCAGCATCGCTGCGCTCGAAGCCGGTCAGCAAAATGCCGCAGGGCTGATAGGCCAGGTAATTGCGGATCAGGTTCTCTTCTTCGGCAAGGTCGTAATGATAGTTGCCGATCAGCACCTCTAGCCCACGAGG                                                                                                                                                      <  1:402323‑M1/150‑1 (MQ=255)    aaCCAGCATCTGCCGGGCAGCATCGCTGCGCTCGAAGCCGGTCAGCAAAATGCCGCAGGGCTGATAGGCCAGGTAATTGCGGATCAGGTTCTCTTCTTCGGCAAGGTCGTAATGATAGTTGCCGATCAGCACCTCTAGCCCACGAGGgcg                                                                                                                                                   >  2:1220146/1‑150 (MQ=255)     aCCAGCATCTGCCGGGCAGCATCGCTGCGCTCGAAGCCGGTCAGCAAAATGCCGCAGGGCTGATAGGCCAGGTAATTGCGGATCAGGTTCTCTTCTTCGGCAAGGTCGTAATGATAGTTGCCGATCAGCACCTCTAGCCCACGAGGgcgc                                                                                                                                                  <  1:1220146/150‑1 (MQ=255)         gCATCTGCCGGGCAGCATCGCTGCGCTCGAAGCCGGTCAGCAAAATGCCGCAGGGCTGATAGGCCAGGTAATTGCGGATCAGGTTCTCTTCTTCGGCAAGGTCGTAATGATAGTTGCCGATCAGCACCTCTAGCCCACGAGGGCGCATGa                                                                                                                                              >  1:588415/1‑150 (MQ=255)           aTCTGCCGGGCAGCATCGCTGCGCTCGAAGCCGGTCAGCAAAATGCCGCAGGGCTGATAGGCCAGGTAATTGCGGATCAGGTTCTCTTCTTCGGCAAGGTCGTAATGATAGTTGCCGATCAGCACCTCTAGCCCACGAGGGCGCATGAcc                                                                                                                                            <  1:1489133‑M2/150‑3 (MQ=255)           aTCTGCCGGGCAGCATCGCTGCGCTCGAAGCCGGTCAGCAAAATGCCGCAGGGCTGATAGGCCAGGTAATTGCGGATCAGGTTCTCTTCTTCGGCAAGGTCGTAATGATAGTTGCCGATCAGCACCTCTAGCACACGAGGtcatgcgccc                                                                                                                                            >  2:1499930‑M1/1‑140 (MQ=255)               gCCGGGCAGCATCGCTGCGCTCGAAGCCGGTCAGCAAAATGCCGCAGGGCTGATAGGCCAGGTAATTGCGGATCAGGTTCTCTTCTTCGGCAAGGTCGTAATGATAGTTGCCGATCAGCACCTCTAGCCCACGAGGGCGCATGAcctcgt                                                                                                                                        >  2:1489133‑M2/1‑144 (MQ=255)               gCCGGGCAGCATCGCTGCGCTCGAAGCCGGTCAGCAAAATGCCGCAGGGCTGATAGGCCAGGTAATTGCGGATCAGGTTCTCTTCTTCGGCAAGGTCGTAATGATAGTTGCCGATCAGCACCTCTAGCCCACGAGGGCGCATGAcctcgt                                                                                                                                        <  1:865676‑M2/150‑7 (MQ=255)                 cGGGCAGCATCGCTGCGCTCGAAGCCGGTCAGCAAAATGCCGCGGGGCTGATAGGCCAGGTAATTGCGGATCAGGTTCTCTTCTTCGGCAAGGTCGTAATGATAGTTGCCGATCAGCACCTCTAGCCCACGAGGGCGCATGACCTCGTGa                                                                                                                                      >  2:173609/1‑150 (MQ=255)                 cGGGCAGCATCGCTGCGCTCGAAGCCGGTCAGCAAAATGCCGCAGGGCTGATAGGCCAGGTAATTGCGGATCAGGTTCTCTTCTTCGGCAAGGTCGTAATGATAGTTGCCGATCAGCACCTCTAGCCCACGAGGtcatgcgccctcgtgg                                                                                                                                      <  1:1499930‑M1/150‑17 (MQ=255)                  gggCAGCATCGCTGCGCTCGAAGCCGGTCAGCAAAATGCCGCAGGGCTGATAGGCCAGGTAATTGCGGATCAGGTTCTCTTCTTCGGCAAGGTCGTAATGATAGTTGCCGATCAGCACTGAAACGCTACGAGGGCGCATGACCTCGTGaa                                                                                                                                     <  1:1277198/150‑1 (MQ=255)                    gccgaaTCGCTGAGCTCGAAGCCGGTCAGCAAAATGCCGCAGGGCTGATAGGCCAGGTAATTGCGGATCAGGTTCTCTTCTTCGGCAAGGTCGTAATGATAGTTGCCGATCAGCACCTCTAGCCCACGAGGGCGCATGACCTCGTGAATg                                                                                                                                   <  2:761540/145‑1 (MQ=255)                    gcagcaTCGCTCCGCTCGAAGCCGGTCAGCAAAATGCCGCAGGGCTGATAGGCCAGGTAATTGCGGATCAGGTTCTCTTCTTCGGCAAGGTCGTAATGATAGTTGCCGATCAGCACCTCTAGCCCACGAGGGCGCATGACCTCGTGAATg                                                                                                                                   <  2:192379/150‑1 (MQ=255)                          tCGCTGCGCTCGAAGCCGGTCAGCAAAATGCCGCAGGGCTGATAGGCCAGGTAATTGCGGATCAGGTTCTCTTCTTCGGCAAGGTCGTAATGATAGTTGCCGATCAGCACCTCTAGCCCACGAGGGCGCATGACCTCGTGAATGGCCTcc                                                                                                                             >  2:360050/1‑150 (MQ=255)                            gCTGCGCTCGAAGCCGGTCAGCAAAATGCCGCAGGGCTGATAGGCCAGGTAATTGCGGATCAGGTTCTCTTCTTCGGCAAGGTCGTAATGATAGTTGCCGATCAGCACCTCTAGCCCACGAGGGCGCATGACCTCGTGAATGGCCTCCAg                                                                                                                           <  2:641924/150‑1 (MQ=255)                             cTGCGCTCGAAGCCGGTCAGCAAAATGCCGCAGGGCTGATAGGCCAGGTAATTGCGGATCAGGTTCTCTTCTTCGGCAAGGTCGTAATGATAGTTGCCGATCAGCACCTCTAGCCCACGAGGGCGCATGACCTCGTGAATGGCCTCCAgg                                                                                                                          <  2:865676/150‑1 (MQ=255)                               gcgcTCGAAGCCGGTCAGCAAAATGCCGCAGGGCTGATAGGCCAGGTAATTGCGGATCAGGTTCTCTTCTTCGGCAAGGTCGTAATGATAGTTGCCGATCAGCACCTCTAGCCCACGAGGGCGCATGACCTCGTGAATGGCCTCCAGGgt                                                                                                                        <  1:439503/150‑1 (MQ=255)                                     gAAGCCGGTCAGCAAAATGCCGCAGGGCTGATAGGCCAGGTAATTGCGGATCAGGTTCTCTTCTTCGGCAAGGTCGTAATGATAGTTGCCGATCAGCACCTCTAGCCCACGAGGGCGCATGACCTCGTGAATGGCCTCCAGGGTGTCGAt                                                                                                                  <  2:588415/150‑1 (MQ=255)                                       aGCCGGTCAGCAAAATGCCGCAGGGCTGATAGGCCAGGTAATTGCGGATCAGGTTCTCTTCTTCGGCAAGGTCGTAATGATAGTTGCCGATTAGCACCTCTAGCCCACGAGGGCGCATGACCTCGTGAATGGCCTCCAGGGTGTCGATGa                                                                                                                <  1:680270/150‑1 (MQ=255)                                        gCCGGTCAGCAAAATGCCGCAGGGCTGATAGGCCAGGTAATTGCGGATCAGGTTCTCTTCTTCGGCAAGGTCGTAATGATAGTTGCCGATCAGCACCTCTAGCCCACGAGGGCGCATGACCTCGTGAATGGCCTCCAGGGTGTCGATGaa                                                                                                               <  1:150784/150‑1 (MQ=255)                                        gCCGGTCAGCAAAATGCCGCAGGGCTGATAGGCCAGGTAATTGCGGATCAGGTTCTCTTCTTCGGCAAGGTCGTAATGATAGTTGCCGATCAGCACCTCTAGCCCACGAGGGCGCATGACCTCGTGAATGGCCTCCAGGGTGTCGATGaa                                                                                                               <  1:106576/150‑1 (MQ=255)                                              taGCAAAATGCCGTAGGGTTAATAGGCCAGGTAATTGCGGATCAGGTTCTCTTCTTCGGCAAGGTCGTAATGCTAGTTGCCGATCATCACCTCTAGCCCACGAGGGCGCATGACCTCGTGAGTGGCCTTCAGGGTGTCGATGAACAgttg                                                                                                         <  2:236435/149‑1 (MQ=255)                                               aGCAAAATGCCGCAGGGCTGATAGGCCAGGTAATTGCGGATCAGGTTCTCTTCTTCGGCAAGGTCGTAATGATAGTTGCCGATCAGCACCTCTAGCCCACGAGGGCGCATGACCTCGTGAATGGCCTCCAGGGTGTCGATGAACAgttgg                                                                                                        >  1:1373138/1‑150 (MQ=255)                                               aGCAAAATGCCGCAGGGCTGATAGGCCAGGTAATTGCGGATCAGGTTCTCTTCTTCGGCAAGGTCGTAATGATAGTTGCCGATCAGCACCTCTAGCCCACGAGGGCGCATGAAATCGTGAATGGCCTCCAGGGTGTCGATGAACAgttgg                                                                                                        <  1:1620989/150‑1 (MQ=255)                                                gCAAAATGCCGCAGGGCTGATAGGCCAGGTAATTGCGGATCAGGTTCTCTTCTTCGGCAAGGTCGTAATGATAGTTGCCGATCAGCACCTCTAGCCCACGAGGGCGCATGACCTCGTGAATGGCCTCCAGGGTGTCGATGAACAgttgga                                                                                                       >  1:236435/1‑149 (MQ=255)                                                 cAAAATGCCGCAGGGCTGATAGGCCAGGTAATTGCGGATCAGGTTCTCTTCTTCGGCAAGGTCGTAATGATAGTTGCCGATCAGCACCTCTAGCCCACGAGGGCGCATGACCTCGTGAATGGCCTCCAGGGTGTCGATGAACAgttggtt                                                                                                      <  1:165872/150‑1 (MQ=255)                                                  aaaaTGCCGCAGGGCTGATAGGCCAGGTAATTGCGGATCAGGTTCTCTTCTTCGGCAAGGTCGTAATGATAGTTGCCGATCAGCACCTCTAGCCCACGAGGGCGCATGACCTCGTGAATGGCCTCCAGGGTGTCGATGAACAgttggttg                                                                                                     <  1:107001/150‑1 (MQ=255)                                                   aaaTGCCGCAGGGCTGATAGGCCAGGTAATTGCGGATCAGGTTCTCTTCTTCGGCAAGGTCGTAATGATAGTTGCCGATCAGCACCTCTAGCCCACGAGGGCGCATGACCTCGTGAATg                                                                                                                                   >  2:1447115/1‑119 (MQ=255)                                                   aaaTGCCGCAGGGCTGATAGGCCAGGTAATTGCGGATCAGGTTCTCTTCTTCGGCAAGGTCGTAATGATAGTTGCCGATCAGCACCTCTAGCCCACGAGGGCGCATGACCTCGTGAATg                                                                                                                                   <  1:1447115/119‑1 (MQ=255)                                                         cGCAGGGCTGATAGGCCAGGTAATTGCGGATCAGGTTCTCTTCTTCGGCAAGGTCGTAATGATAGTTGCCGATCAGCACCTCTAGCCCACGAGGGCGCATGACCTCGTGAATGGCCTCCAGGGTGTCGATGAACAGTTGGTTGGACAacg                                                                                              >  1:1327203/1‑150 (MQ=255)                                                          gCAGGGCTGATAGGCCAGGTAATTGCGGATCAGGTTCTCTTCTTCGGCAAGGTCGTAATGATAGTTGCCGATCAGCACCTCTAGCCCACGAGGGCGCATGACCTCGTGAATGGCCTCCAGGGTGTCGATGAACAgttg                                                                                                         <  1:179121/138‑1 (MQ=255)                                                          gCAGGGCTGATAGGCCAGGTAATTGCGGATCAGGTTCTCTTCTTCGGCAAGGTCGTAATGATAGTTGCCGATCAGCACCTCTAGCCCACGAGGGCGCATGACCTCGTGAATGGCCTCCAGGGTGTCGATGAACAgttg                                                                                                         >  2:179121/1‑138 (MQ=255)                                                              ggCTGATAGGCCAGGTAATTGCGGATCAGGTTCTCTTCTTCGGCAAGGTCGTAATGATAGTTGCCGATCAGCACCTCTAGCCCACGAGGGCGCATGACCTCGTGAATGGCCTCCAGGGTATCGATGAACAGTTGGTTGGACAACGACggg                                                                                         >  2:736457/1‑150 (MQ=255)                                                                        ccAGGTAATTGCGGATCAGGTTCTCTTCTTCGGCAAGGTCGTAATGATAGTTGCCGATCAGCACCTCTAGCCCACGAGGGCGCATGACCTCGTGAATGGCCTCCAGGGTGTCGATGAACAGTTGGTTGGACAACGACGGGATCAAcacca                                                                               >  1:500871/1‑150 (MQ=255)                                                                         cAGGTAATTGCGGATCAGGTTCTCTTCTTCGGCAAGGTCGTAATGATAGTTGCCGATCAGCACCTCTAGCCCACGAGGGCGCATGACCTCGTGAATGGCCTCCAGGGTGTCGATGAACAGTTGGTTGGACAACGACGGGATCAAcaccac                                                                              <  1:1634976/150‑1 (MQ=255)                                                                         cAGGTAATTGCGGATCAGGTTCTCTTCTTCGGCAAGGTCGTAATGATAGTTGACGATCAGCACCTCTAGCCCACGAGGGCGCATGACCTCGTGAATGGCCTCCAGGGTGTCGATGAACAGTTGGTTGGACAACGACGGGATCAAcaccac                                                                              >  2:1634976/1‑150 (MQ=255)                                                                                ttGCGGATCAGGTTCTCTTCTTCGGCAAGGTCGTAATGATAGTTGCCGATCAGCACCTCTAGCCCACGAGGGCGCATGACCTCGTGAATGGCCTCCAGGGTGTCGATGAACAGTTGGTTGGACAACGACGGGATCAACACCACCACCGAc                                                                       >  1:1426013/1‑150 (MQ=255)                                                                                 tGCGGATCAGGTTCTCTTCTTCGGCAAGGTCGTAATGATAGTTGCCGATCAGCACCTCTAGCCCACGAGGGCGCATGACCTCGTGAATGGCCTCCAGGGTGTCGATGAACAGTTGGTTGGACAACGACGGGATCAACACCACCACCGACt                                                                      <  1:173609/150‑1 (MQ=255)                                                                                       tCAGGTTCTCTTCTTCGGCAAGGTCGTAATGATAGTTGCCGATCAGCACCTCTAGCCCACGAGGGCGCATGACCTCGTGAATGGCCTCCAGGGTGTCGATGAACAGTTGGTTGGACAACGACGGGATCAACACCACCACCGACTGGCTGc                                                                <  1:736457/150‑1 (MQ=255)                                                                                          ggTTCTCTTCTTCGGCAAGGTCGTAATGATAGTTGCCGATCAGCACCTCTAGCCCACGAGGGCGCATGACCTCGTGAATGGCCTCCAGGGTGTCGATGAACAGTTGGTTGGACAACGACGGGATCAACACCACCACCGACTGGCTGCGTg                                                             >  2:1185831/1‑150 (MQ=255)                                                                                           gTTCTCTTCTTCGGCAAGGTCGTAATGATAGTTGCCGATCAGCACCTCTAGCCCACGAGGGCGCATGACCTCGTGAATg                                                                                                                                   <  2:616809/79‑1 (MQ=255)                                                                                           gTTCTCTTCTTCGGCAAGGTCGTAATGATAGTTGCCGATCAGCACCTCTAGCCCACGAGGGCGCATGACCTCGTGAATg                                                                                                                                   <  2:601129/79‑1 (MQ=255)                                                                                           gTTCTCTTCTTCGGCAAGGTCGTAATGATAGTTGCCGATCAGCACCTCTAGCCCACGAGGGCGCATGACCTCGTGAATg                                                                                                                                   <  2:904875/79‑1 (MQ=255)                                                                                           gTTCTCTTCTTCGGCAAGGTCGTAATGATAGTTGCCGATCAGCACCTCTAGCCCACGAGGGCGCATGACCTCGTGAATg                                                                                                                                   >  1:904875/1‑79 (MQ=255)                                                                                           gTTCTCTTCTTCGGCAAGGTCGTAATGATAGTTGCCGATCAGCACCTCTAGCCCACGAGGGCGCATGACCTCGTGAATg                                                                                                                                   >  1:601129/1‑79 (MQ=255)                                                                                           gTTCTCTTCTTCGGCAAGGTCGTAATGATAGTTGCCGATCAGCACCTCTAGCCCACGAGGGCGCATGACCTCGTGAATg                                                                                                                                   >  1:616809/1‑79 (MQ=255)                                                                                           gTTCTCTTCTTCGGCAAGGTCGTAATGATAGTTGCCGATCAGCACCTCTAGCCCACGAGGGCGCATGACCTCGTGAATGGCCTCCAGGGTGTCGATGAACAGTTGGTTGGACAACGACGGGATCAACACCACCACCGACTGGCTGCGTGc                                                            >  2:1206794/1‑150 (MQ=255)                                                                                               tcttctTCGGCAAGGTCGTAATGATAGTTGCCGATCAGCACCTCTAGCCCACGAGGGCGCATGACCTCGTGAATGGCCTCCAGGgtgt                                                                                                                      <  2:934366/88‑1 (MQ=255)                                                                                               tcttctTCGGCAAGGTCGTAATGATAGTTGCCGATCAGCACCTCTAGCCCACGAGGGCGCATGACCTCGTGAATGGCCTCCAGGgtgt                                                                                                                      <  2:934122/88‑1 (MQ=255)                                                                                               tcttctTCGGCAAGGTCGTAATGATAGTTGCCGATCAGCACCTCTAGCCCACGAGGGCGCATGACCTCGTGAATGGCCTCCAGGgtgt                                                                                                                      >  1:934122/1‑88 (MQ=255)                                                                                               tcttctTCGGCAAGGTCGTAATGATAGTTGCCGATCAGCACCTCTAGCCCACGAGGGCGCATGACCTCGGGAATGGCCTCCAGGgtgt                                                                                                                      >  1:934366/1‑88 (MQ=255)                                                                                                 ttcttcGGCAAGGTCGTAATGATAGTTGCCGATCAGCACCTCTAGCCCACGAGGGCGCATGACCTCGTGAATGGCCTCCAGGGTGTTGATGAACAGTTGGTTGGACAACGACGGGATCAACACCACCACCGACTGGCTGCGTGCCGAGGc                                                      >  2:1107552/1‑150 (MQ=255)                                                                                                   cttcGGCAAGGTCGTAATGATAGTTGCCGATCAGCACCTCTAGCCCACGAGGGCGCATGACCTCGTGAATGGCCTCCAGGGTGTCGATGAACAGTTGGTTGGACAACGACGGGATCAACACCACCACCGACTGGCTGCGTGCCGAGGCCa                                                    >  1:240966/1‑150 (MQ=255)                                                                                                    ttcGGCAAGGTCGTAATGATAGTTGCCGATCAGCACCTCTAGCCCACGAGGtcatgcgccctcgtgggctaga                                                                                                                                <  2:388985‑M1/73‑23 (MQ=255)                                                                                                    ttcGGCAAGGTCGTAATGATAGTTGCCGATCAGCACCTCTAGCCCACGAGGtcatgcgccctcgtgggctaga                                                                                                                                >  1:388985‑M1/1‑51 (MQ=255)                                                                                                        gCAAGGTCGTAATGATAGTTGCCGATCAGCACCTCTAGCCCACGAGGtcatgcgccctcgt                                                                                                                                        <  1:1292703‑M1/61‑15 (MQ=255)                                                                                                        gCAAGGTCGTAATGATAGTTGCCGATCAGCACCTCTAGCCCACGAGGtcatgcgccctcgt                                                                                                                                        >  2:1292703‑M1/1‑47 (MQ=255)                                                                                                         cAAGGTCGTAATGATAGTTGCCGATCAGCACCTCTAGCCCACGAGGGCGCATGACCTCGTGAATGGCCTCCAGGGTGTCGATGAACAGTTGGTTGGACAACGACGGGATCAACACCACCACCGACTGGCTGCGTGCCGAGGCCAGCGccc                                              <  1:1206794/150‑1 (MQ=255)                                                                                                                gTAATGATAGTTGCCGATCAGCACCTCTAGCCCACGAGGGCGCATGACCTCGTGAATGGCCTCCAGGGTGTCGATGAACAg                                                                                                            <  1:872023/81‑1 (MQ=255)                                                                                                                gTAATGATAGTTGCCGATCAGCACCTCTAGCCCACGAGGGCGCATGACCTCGTGAATGGCCTCCAGGGTGTCGATGAACAg                                                                                                            >  2:872023/1‑81 (MQ=255)                                                                                                                   aTGATAGTTGCCGATCAGCACCTCTAGCCCACGAGGGCGCATGACCTCGTGAATGGCCTCCAGGGTGTCGATGAACAGTTGGTTGGACAACGACGGGATCAACACCACCACCGACTGGCTGCGTGCCGAGGCCAGCGCCCGGGCGGCCgg                                    <  1:361560/150‑1 (MQ=255)                                                                                                                         gTTGCCGGTCAGCACCTCTAGCCCACGAGGGCGCATGACCTCGTGAATGGCCTCCAGGGTGTCGATGAACAGTTGGTTGGACAACGACGGGATCAACACCACCACCGACTGGCTGCGTGCCGAGGCCAGCGCCCGGGCGGCCGGGTTGGc                              <  2:1327203/150‑1 (MQ=255)                                                                                                                         gTTGCCGATCAGCACCTCTAGCCCACGAGGGCGCATGACCTCGTGAATGGCCTCCAGGGTGTTGATGAACAGTTGGTTGGACAACGACGGGATCAACACCACCACCGACTGGCTGCGTGCCGAGGCCAGCGCCCGGGCGGCCGGGTTGGc                              <  1:1107552/150‑1 (MQ=255)                                                                                                                              cGATCAGCACCTCTAGCCCACGAGGGCGCATGACCTCGTGAATGGCCTCCAGGGTGTCGATGAACAGTTGGTTGGACAACGACGGGATCAACACCACCACCGACTGGCTGCGTGCCGAGGCCAGCGCCCGGGCGGCCGGGTTGGCCACAt                         >  2:610592/1‑150 (MQ=255)                                                                                                                               gATCAGCACCTCTAGCCCACGAGGGCGCATGACCTCGTGAATGGCCTCCAGGGTGTCGATGAACAGTTGGTTGGACAACGACGGGATCAACACCACCACCGACTGGCTCCGTGCCGAGGCCAGCGCCCGGGCGGCCGGGTTGGCCACATa                        >  2:1589988/1‑150 (MQ=255)                                                                                                                                aTCAGCACCTCTAGCCCACGAGGGCGCATGACCTCGTGAATGGCCTCCAGGGTGTCGATGAACAGTTGGTTGGACAACGACGGGATCAACACCACCACCGACTGGCTGCGTGCCGAGGCCAGCGCCCGGGCGGCCGGGTTGGCCACATAg                       <  2:500871/150‑1 (MQ=255)                                                                                                                                 tCAGCACCTCTAGCCCACGAGGGCGCATGACCTCGTGAATGGCCTCCAGGGTGTCGATGAACAGTTGGTTGGACAACGACGGGATCAACACCACCACCGACTGGCTGCGTGCCGAGGCCAGCGCCCGGGCGGCCGGGTTGGCCACATAGc                      <  1:1509170/150‑1 (MQ=255)                                                                                                                                         tctAGCCCACGAGGGCGCATGAcctcgtgggctagaggtgctgatcggcaactatcattacgaccttgccgaa                                                                                           >  1:388985‑M2/1‑22 (MQ=255)                                                                                                                                         tctAGCCCACGAGGGCGCATGAcctcgtgggctagaggtgctgatcggcaactatcattacgaccttgccgaa                                                                                           <  2:388985‑M2/73‑52 (MQ=255)                                                                                                                                           tAGCCCACGAGGGCGCATGACCTCGTGAATGGCCTCCAGGGTGTCGATGAACAGTTGGTTGGACAACGACGGGATCAAcaccac                                                                              >  2:995768/1‑84 (MQ=255)                                                                                                                                           tAGCCCACGAGGGCGCATGACCTCGTGAATGGCCTCCAGGGTGTCGATGAACAGTTGGTTGGACAACGACGGGATCAAcaccac                                                                              <  1:995768/84‑1 (MQ=255)                                                                                                                                               ccACGAGGGCGCATGAcctcgtgggctagaggtgctgatcggcaactatcattacgaccttgccgaagaagagaacctgatccgcaattacctggcctatcagccctgcggcattttgctgaccggcttcgagcgcagcgatgctgcccg        <  1:1499930‑M2/150‑135 (MQ=255)                                                                                                                                               ccACGAGGGCGCATGACCTCGTGAATGGCCTCCAGGGTGTCGATGAACAGTTGGTTGGACAACGACGGGATCAACACCACCACCGACTGGCTGCGTGCCGAGGCCAGCGCCCGGGCGGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCt        >  1:239112/1‑150 (MQ=255)                                                                                                                                                 aCGAGGtcatgcgccctcgtgggctagaggtgctgatcggcaactatcattacgaccttgccgaagaagagaacctgatccgcaattacctggcctatcagccctgcggcattttgctgaccggcttcgagcgcagcgatgctgcccggc      <  1:865676‑M1/150‑145 (MQ=255)                                                                                                                                                 aCGAGGtcatgcgccctcgtgggctagaggtgctgatcggcaactatcattacgaccttgccgaagaagagaacctgatccgcaattacctggcctatcagccctgcggcattttgctgaccggcttcgagcgcagcgatgctgcccggc      >  2:1489133‑M1/1‑6 (MQ=255)                                                                                                                                                 aCGAGGGCGCATGAcctcgtgggctagaggtgctgatcggcaactatcattacgaccttgc                                                                                               <  1:1292703‑M2/61‑48 (MQ=255)                                                                                                                                                 aCGAGGGCGCATGAcctcgtgggctagaggtgctgatcggcaactatcattacgaccttgc                                                                                               >  2:1292703‑M2/1‑14 (MQ=255)                                                                                                                                                     ggtcatgcgccctcgtgggctagaggtgctgatcggcaactatcattacgaccttgccgaagaagagaacctgatccgcaattacctggcctatcagccctgcggcattttgctgaccggcttcgagcgcagcgatgctgcccggcagat  <  1:1489133‑M1/150‑149 (MQ=255)                                                                                                                                                     gggCGCATGAcctcgtgtgctagaggtgctgatcggcaactatcattacgaccttgccgaagaagagaacctgatccgcaattacctggcctatcagccctgcggcattttgctgaccggcttcgagcgcagcgatgctgcccggcagat  >  2:1499930‑M2/1‑10 (MQ=255)                                                                                                                                                      |                                                                                                                                                     GGCAACCAGCATCTGCCGGGCAGCATCGCTGCGCTCGAAGCCGGTCAGCAAAATGCCGCAGGGCTGATAGGCCAGGTAATTGCGGATCAGGTTCTCTTCTTCGGCAAGGTCGTAATGATAGTTGCCGATCAGCACCTCTAGCCCACGAGGGCGCATGACCTCGTGAATGGCCTCCAGGGTGTCGATGAACAGTTGGTTGGACAACGACGGGATCAACACCACCACCGACTGGCTGCGTGCCGAGGCCAGCGCCCGGGCGGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCG  >  NC_002947/3866484‑3866781

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.