New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5460679 =112 (1.870)4 (0.080) 4/194 NT 5.2% intergenic (+12/‑205) holA/PP_4797 DNA polymerase III subunit delta/hypothetical protein
?NC_002947 5460783 = 56 (1.160)intergenic (+116/‑101) holA/PP_4797 DNA polymerase III subunit delta/hypothetical protein

Only 100 of 139 total aligned reads displayed.

GTTGGGCGCAACTGCTGCAGGATGCCCAGCGAATCGATGCGCAGATCAAAGGGCAGGCTGAAGGTTCGCCGTGGATTGGCCTGGCGCGGCTGTCGCTGTTGATGGCTGGCCAGCGCCTGGCCCTCCCTCCCGAGTAACTGCGGCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGACCTGCTAATCAATCTCCACCCACCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACATAGGCACCAGCGCCTCGACCATATACACAATCAATTGGCCC  >  NC_002947/5460531‑5460826
                                                                                                                                                    |                                                                                                                                                   
atggacttggccttgttggggccgtgctttttcggctttttgctcatggtgggcttcccgggttgggtgagtttcgggcgcactgtaggccccccgaagggtgggggccaattgattgtgtatatggtcgaggcgctggtgcctatgtgt                                                                                                                                                    >  2:366722‑M1/149‑150 (MQ=255)
  ggacttggccttgttggggccgtgctttttcggctttttgctcatggtgggcttcccgggttgggtgagtttcgggcgcactgtaggccccccgaagggtgggggccaattgattgtgtatatggtcgaggcgctggtgcctatgtGTAg                                                                                                                                                  >  2:1397442‑M1/147‑150 (MQ=255)
  ggacttggccttgttggggccgtgctttttcggctttttgctcatggtgggcttcccgggttgggtgagtttcgggcgcactgtaggccccccgaagggtgggggccaattgattgtgtatatggtcgaggcgctggtgcctatgtGTAg                                                                                                                                                  <  1:1397442‑M1/4‑1 (MQ=255)
    acttggccttgttggggccgtgctttttcggctttttgctcatggtgggcttcccgggttgggtgagtttcgggcgcactgtaggccccccgaagggtgggggccaattgattgtgtatatggtcgaggcgctggtgcctatgtGTAGGa                                                                                                                                                <  1:1280992‑M1/6‑1 (MQ=255)
      cgcAACTGCTGCAGGATGCCCAGCGAATCGATGCGCAGATCAAAGGGCAGGCTGAAGGTTCGCCGTGGATTGGCCTGGCGCGGCTGTCGCTGTTGATGGCTGGCCAGCGCCTGGCCCTCCCTCCCGAGTAACTGCGGCCGTCGTAGGAGc                                                                                                                                              <  2:367343/150‑1 (MQ=255)
        ggccttgttggggccgtgctttttcggctttttgctcatggtgggcttcccgggttgggtgagtttcgggcgaactgtgagccccccgaagggtgggggccaattgattgtgtatatggtcgaggcgctggtgcctatgtGTAGGAGCgg                                                                                                                                            <  1:1017732‑M1/10‑1 (MQ=255)
        ggccttgttggggccgtgctttttcggctttttgctcatggtgggcttcccgggttgggtgagtttcgggagccgttttggccccccgacgggtggggaccgcgtgatggtggagatggtcgaggcgctggtgcctatgtGTAGGAGCgg                                                                                                                                            <  1:773559‑M1/10‑1 (MQ=255)
         gccttgttggggccgtgctttttcggctttttgctcatggtgggcttcccgggttgggtgagttttgggcgcactgtaggccccccgaagggtgggggccaattgattgtgtatatggtcgaggcgctggtgcctatgtGTAGGAGCggg                                                                                                                                           >  2:50021‑M1/140‑150 (MQ=255)
         gccttgttggggccgtgctttttcggctttttgctcatggtgggcttcccgggttgggtgagtttcgggcgcactgtaggccccccgaagggtgggggccaattgattgtgtatatggtcgaggcgctggtgcctatgtGTAGGAGCggg                                                                                                                                           >  1:325017‑M1/140‑150 (MQ=255)
         aaCTGCTGCAGGATGCCCAGCGAATCGATGCGCAGATCAAAGGGCAGGCTGAAGGTTCGCCGTGGATTGGCCTGGCGCGGCTGTCGCTGTTGATGGCTGGCCAGCGCCTGGCCCTCCCTCCCGAGTAACTGCGGCCGTCGTAGGAGCggg                                                                                                                                           >  1:1590078/1‑150 (MQ=255)
         aaCTGCTGCAGGATGCCCAGCGAATCGATGCGCAGATCAAAGGGCAGGCTGAAGGTTCGCCGTGGATTGGCCTGGCGCGGCTGTCGCTGTTGATGGCTGGCCAGCGCCTGGCCCTCCCTCCCGAGTAACTGCGGCCGTCGTAGGAGCggg                                                                                                                                           <  1:143901/150‑1 (MQ=255)
           cttgttggggccgtgctttttcggctttttgctcatggtgggcttcccgggttgggtgagtttcgggcgcactgtaggccccccgaagggtgggggccaattgattgtgtatatggtcgaggcgctggtgcctatgtGTAGGAGCGGGtt                                                                                                                                         <  1:1063482‑M1/13‑1 (MQ=255)
           ctgctgCAGGATGCCCAGCGAATCGATGCGCAGATCAAAGGGCAGGCTGAAGGTTCGCCGTGGATTGGCCTGGCGCGGCTGTCGCTGTTGATGGCTGGCCAGCGCCTGGCCCTCCCTCCCGAGTAACTGCGGCCGTCGTAGGAGCGGGtt                                                                                                                                         <  2:1360311/150‑1 (MQ=255)
              gttggggccgtgctttttcggctttttgctcatggtgggcttcccgggttgggtgagtttcgggcgcactgtaggccccccgaagggtgggggccaattgattttgtatatggtcgaggcgctggtgcctatgtGTAGGAGCGGGTTTAc                                                                                                                                      >  1:1116815‑M1/135‑150 (MQ=255)
              ctgcAGGATGCCCAGCGAATCGATGCGCAGATCAAAGGGCAGGCTGAAGGTTCGCCGTGGATTGGCCTGGCGCGGCTGTCGCTGTTGATGGCTGGCCAGCGCCTGGCCCTCCCTCCCGAGTAACTGCGGCCGTCGTAGGAGCGGGTTTAc                                                                                                                                      <  2:1208275/150‑1 (MQ=255)
                gcAGGATGCCCAGCGAATCGATGCGCAGATCAAAGGGCAGGCTGAAGGTTCGCCGTGGATTGGCCTGGCGCGGCTGTCGCTGTTGATGGCTGGCCAGCGCCTGGCCCTCCCTCCCGAGTAACTGCGGCCGTCGTAGGAGCGGGTTTAccc                                                                                                                                    >  2:602348/1‑150 (MQ=255)
                gcAGGATGCCCAGCGAATCGATGCGCAGATCAAAGGGCAGGCTGAAGGTTCGCCGTGGATTGGCCTGGCGCGGCTGTCGCTGTTGATGGCTGGCCAGCGCCTGGCCCTCCCTCCCGAGTAACTGCGGCCGTCGTAGGAGCGGGTTTAccc                                                                                                                                    <  1:645214/150‑1 (MQ=255)
                 cAGGATGCCCAGCGAATCGATGCGCAGATCAAAGGGCAGGCTGAAGGTTCGCCGTGGATTGGCCTGGCGCGGCTGTCGCTGTTGATGGCTGGCCAGCGCCTGGCCCTCCCTCCCGAGTAACTGCGGCCGTCGTAGGAGCGGGTTTACCcg                                                                                                                                   >  1:118275/1‑150 (MQ=255)
                 cAGGATGCCCAGCGAATCGATGCGCAGATCAAAGGGCAGGCTGAAGGTTCGCCGTGGATTGGCCTGGCGCGGCTGTCGCTGTTGATGGCTGGCCAGCGCCTGGCCCTCCCTCCCGAGTAACTGCGGCCGTCGTAGGAGCGGGTTTACCcg                                                                                                                                   <  2:1590078/150‑1 (MQ=255)
                  gggccgtgctttttcggctttttgctcatggtgggcttcccgggttgggtgagtttcgggcgcactgtaggccccccgaagggtgggggccaattgattgtgtatatggtcgaggcgctggtgcctatgtGTAGGAGCGGGTTTACCcgc                                                                                                                                  <  2:1357724‑M1/20‑1 (MQ=255)
                     ccgtgctttttcggctttttgctcatggtgggcttcccgggttgggtgagtttcgggcgcactgtaggccccccgaagggtgggggccaattgattgtgtatatggtcgaggcgctggtgcctatgtGTAGGAGCGGGTTTACCCGCGaa                                                                                                                               <  2:749951‑M1/23‑1 (MQ=255)
                        cccAGCGAATCGATGCGCAGATCAAAGGGCAGGCTGAAGGTTCGCCGTGGATTGGCCTGGCGCGGCTGTCGCTGTTGATGGCTGGCCAGCGCCTGGCCCTCCCTCCCGAGTAACTGCGGCCGTCGTAGGAGCGGGTTTACCCGCGAagag                                                                                                                            <  1:1410157/150‑1 (MQ=255)
                         ccAGCGAATCGATGCGCAGATCAAAGGGCAGGCTGAAGGTTCGCCGTGGATTGGCCTGGCGCGGCTGTCGCTGTTGATGGCTGGCCAGCGCCTGGCCCTCCCTCCCGAGTAACTGTGGCCGTCGTAGGAGCGGGTTTACCCGCGAAGAgg                                                                                                                           >  2:601288/1‑150 (MQ=255)
                         ccAGCGAATCGATGCGCAGATCAAAGGGCAGGCTGAAGGTTCGCCGTGGATTGGCCTGGCGCGGCTGTCGCTGTTGATGGCTGGCCAGCGCCTGGCCCTCCCTCCCGAGTAACTGCGGCCTTCGTGGGAGCGGGTTTACCAGCGAAGAgg                                                                                                                           >  2:1088431/1‑150 (MQ=255)
                          cAGCGAATCGATGCGCAGATCAAAGGGCAGGCTGAAGGTTCGCCGTGGATTGGCCTGGCGCGGCTGTCGCTTTTGATGGCTTAGCATCGCCTGGTCCCCCCTCCCGAGTAACTGCGGCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGc                                                                                                                          >  1:115359/1‑150 (MQ=255)
                          cAGCGAATCGATGCGCAGATCAAAGGGCAGGCTGAAGGTTCGCCGTGGATTGGCCTGGCGCGGCTGTCGCTGTTGATGGCTGGCCAGCGCCTGGCCCTCCCTCCCGAGTAACTGCGGCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGc                                                                                                                          <  1:1063652/150‑1 (MQ=255)
                           aGCGAATCGATGCGCAGATCAAAGGGCAGGCTGAAGGTTCGCCGTGGATTGGCCTGGCGCGGCTGTCGCTGTTGATGGCTGGCCAGCGCCTGGCCCTCCCTCCCGAGTAACTGCGGCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGcc                                                                                                                         >  2:262900/1‑150 (MQ=255)
                           aGCGAATCGATGCGCAGATCAAAGGGCAGGCTGAAGGTTCGCCGTGGATTGGCCTGGCGCGGCTGTCGCTGTTGATGGCTGGCCAGCGCCTGGCCCTCCCTCCCGAGTAACTGCGGCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGcc                                                                                                                         >  1:1634585/1‑150 (MQ=255)
                               tcggctttttgctcatggtgggcttcccgggttgggtgagtttcgggcgcactgtaggccccccgaagggtgggggccaattgattgtgtatatggtcgaggcgctggtgcctatgtGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGAc                                                                                                                     <  2:1196934‑M1/33‑1 (MQ=255)
                                     tGCGCAGATCAAAGGGCAGGCTGAAGGTTCGCCGTGGATTGGCCTGGCGCGGCTGTCGCTGTTGATGGCTGGCCAGCGCCTGGCCCTCCCTCCCGAGTAACTGCGGCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGACCTGCTa                                                                                                               >  2:150893/1‑150 (MQ=255)
                                      gcgcAGATCAAAGGGCAGGCTGAAGGTTCGCCGTGGATTGGCCTGGCGCGGCTGTCGCTGTTGATGGCTGGCCAGCGCCTGGCCCTCCCTCCCGAGTAACTGTGGCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGACCTGCTaa                                                                                                              <  1:601288/150‑1 (MQ=255)
                                       cgcAGATCAAAGGGCAGGCTGAAGGTTCGCCGTGGATTGGCCTGGCGCGGCTGTCGCTGTTGATGGCTGGCCAGCGCCTGGCCCTCCCTCCCGAGTAACTGCGGCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGACCTGCTaat                                                                                                             <  2:957375/150‑1 (MQ=255)
                                        gcAGATCAAAGGGCAGGCTGAAGGTTCGCCGTGGATTGGCCTGGCGCGGCTGTCGCTGTTGATGGCTGGCCAGCGCCTGGCCCTCCCTCCCGAGTAACTGCGGCCGTCGTCGGCAAGCGTATACCCGCGAAGAGGCCGGACCTGCTaatc                                                                                                            >  2:543553/1‑150 (MQ=255)
                                        gcAGATCAAAGGGCAGGCTGAAGGTTCGCCGTGGATTGGCCTGGCGCGGCTGTCGCTGTTGATGGCTGGCCAGCGCCTGGCCCTCCCTCCCGAGTAACTGCGGCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGACCTGCTaatc                                                                                                            >  1:504796/1‑150 (MQ=255)
                                            aTCAAAGGGCAGGCTGAAGGTTCGCCGTGGATTGGCCTGGCGCGGCTGTCGCTGTTGATGGCTGGCCAGCGCCTGGCCCTCCCTCCCGAGTAACTGCGGCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGACCTGCTaatcaatc                                                                                                        >  1:181589/1‑150 (MQ=255)
                                               aaaGGGCAGGCTGAAGGTTCGCCGTGGATTGGCCTGGCGCGGCTGTCGCTGTTGATGGCTGGCCAGCGCCTGGCCCTCCCTCCCGAGTAACTGCGGCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGACCTGCTAATCAATCTcc                                                                                                     >  1:797932/1‑150 (MQ=255)
                                                aaGGGCAGGCTGAAGGTTCGCCGTGGATTGGCCTGGCGCGGCTGTCGCTGTTGATGGCTGGCCAGCGCCTGGCCCTCCCTCCCGAGTAACTGCGGCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGACCTGCTaa                                                                                                              >  2:95901/1‑140 (MQ=255)
                                                aaGGGCAGGCTGAAGGTTCGCCGTGGATTGGCCTGGCGCGGCTGTCGCTGTTGATGGCTGGCCAGCGCCTGGCCCTCCCTCCCGAGTAACTGCGGCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGACCTGCTaa                                                                                                              <  1:95901/140‑1 (MQ=255)
                                                aaGGGCAGGCTGAAGGTTCGCCGTGGATTGGCCTGGCGCGGCTGTCGCTGTTGATGGCTGGCCAGCGCCTGGCCCTCCCTCCCGAGTAACTGCGGCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGACCTGCTAATCAATCTcca                                                                                                    <  1:1446237/150‑1 (MQ=255)
                                                 ccgatctgCTGAATGTTCGCCGTGGATTGGCCTGGCGCCGCTGTCGCTGTTGATGGCTGGCCAGCGCCTGGCCCTCCCTCCCGAGTAACTGCGGCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGACCTGCTAATCAATCTccac                                                                                                   <  1:551946/143‑1 (MQ=255)
                                                    gCAGGCTGAAGGTTCGCCGTGGATTGGCCTGGCGCGGCTGTCGCTGTTGATGGCTGGCCAGCGCCTGGCCCTCCCTCCCGAGTAACTGCGGCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGACCTGCTAATCAATCTccaccca                                                                                                >  1:1225079/1‑150 (MQ=255)
                                                     cAGGCTGAAGGTTCGCCGTGGATTGGCCTGGCGCGGCTGTCGCTGTTGATGGCTGGCCAGCGCCTGGCCCTCCCTCCCGAGTAACTGCGGCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGACCTGCTAATCAATCTccacccac                                                                                               >  2:132098/1‑150 (MQ=255)
                                                     cAGGCTGAAGGTTCGCCGTGGATTAGCCTGGCGCGGCTGTCGCTGTTGATGGCTGGCCAGCGCCTGGCCCTCCCTCCCGAGTAACTGCGGCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGACCTGCTAATCAATCTcca                                                                                                    >  1:1558232/1‑145 (MQ=255)
                                                      aGGCTGAAGGTTCGCCGTGGATTGGCCTGGCGCGGCTGTCGCTGTTGATGGCTGGCCAGCGCCTGGCCCTCCCTCCCGAGTAACTGCGGCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGACCTGCTAATCAATCTCcacccacc                                                                                              >  2:167293/1‑150 (MQ=255)
                                                         cTGAAGGTTCGCCGTGGATTGGCCTGGCGCGGCTGTCGCTGTTGATGGCTGGCCAGCGCCTGGCCCTCCCTCCCGAGTAACTGCGGCCGTCGTAGGAGCGGGTTTAcc                                                                                                                                     <  2:1509361/108‑1 (MQ=255)
                                                         cTGAAGGTTCGCCGTGGATTGGCCTGGCGCGGCTGTCGCTGTTGATGGCTGGCCAGCGCCTGGCCCTCCCTCCCGAGTAACTGCGGCCGTCGTAGGAGCGGGTTTAcc                                                                                                                                     >  1:1509361/1‑108 (MQ=255)
                                                          tGAAGGTTCGCCGTGGATTGGCCTGGCGCGGCTGTCGCTGTTGATGGCTGGCCAGCGCCTGGCCCTCCCTCCCGAGTAACTGCGGCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGACCTGCTAATCAATCTCCACCcaccgttc                                                                                          <  1:262900/150‑1 (MQ=255)
                                                          cgggttgggtgagtttcgggcgcactgtaggccccccgaagggtgggggccaattgattgtgtatatggtcgaggcgctggtgcctatgtGTAGGAGCGGGttt                                                                                                                                        >  2:1248669‑M1/91‑104 (MQ=255)
                                                          cgggttgggtgagtttcgggcgcactgtaggccccccgaagggtgggggccaattgattgtgtatatggtcgaggcgctggtgcctatgtGTAGGAGCGGGttt                                                                                                                                        <  1:1248669‑M1/14‑1 (MQ=255)
                                                                   gCCGTGGATTGGCCTGGCGCGGCTGTCGCTGTTGATGGCTGGCCAGCGCCTGGCCCTCCCTCCCGAGTAACTGCGGCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGACCTGCTAATCAATCTCCACCCACCGTTCACCGTTgcc                                                                                 <  1:132098/150‑1 (MQ=255)
                                                                      gTGGATTGGCCTGGCGCGGCTGTCGCTGTTGATGGCTGGCCAGCGCCTGGCCCTCCCTCCCGAGTAACTGCGGCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGACCTGCTAATCAATCTCCACCCACCGTTCACCGTTgccgcc                                                                              <  1:1175836/150‑1 (MQ=255)
                                                                          aTTGGCCTGGCGCGGCTGTCGCTGTTGATGGCTGGCCAGCGCCTGGCCCTCCCTCCCGAGTAACTGCGGCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGACCTGCTAATCAATCTCCACCCACCGTTCACCGTTgc                                                                                  >  2:954596/1‑142 (MQ=255)
                                                                               ccTGGCGCGGCTGTCGCTGTTGATGGCTGGCCTGCGCCTGGCCCTCCCTCCCGAGTAACTGCGGCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGACCTGCTAATCAATCTCCACCCACCGTTCACCGTTGCCGCCGCCACCGTa                                                                     >  2:1312773/1‑150 (MQ=255)
                                                                                      cgGCTGTCGCTGTTGATGGCTGGCCAGCGCCTGGCCCTCCCTCCCGAGTAACTGCGGCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGACCTGCTAATCAATCTCCACCCACCGTTCACCGTTGCCGCCGCCACCGTATTCGCgg                                                              <  2:1183590/150‑1 (MQ=255)
                                                                                         cTGTCGCTGTTGATGGCTGGCCAGCGCCTGGCCCTCCCTCCCGAGTAACTGCGGCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGACCTGCTAATCAATCTCCACCCACCGTTCACCGTTgcc                                                                                 <  2:664660/128‑1 (MQ=255)
                                                                                         cTGTCGCTGTTGATGGCTGGCCAGCGCCTGGCCCTCCCTCCCGAGTAACTGCGGCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGACCTGCTAATCAATCTCCACCCACCGTTCACCGTTgcc                                                                                 >  1:664660/1‑128 (MQ=255)
                                                                                          cccccgaagggtgggggccaattgattgtgtatatggtcgaggcgctggtgcctatgtGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGACCTGCTAATCAATCTCCACCCACCGTTCACCGTTGCCGCCGCCACCGTATTCGCggg                                                             >  1:956691‑M1/59‑147 (MQ=255)
                                                                                            tCGCTGTTGATGGCTGGCCAGCGCCTGGCCCTCCCTCCCGAGTAACTGCGGCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGACCTGCTAATCAATCTCCACCCACCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAAc                                                        >  2:53424/1‑150 (MQ=255)
                                                                                              gCTGTTGATGGCTGGCCAGCGCCTGGCCCTCCCTCCCGAGTAACTGCGGCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGACCTGCTAATCAATCTCCACCCACCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAAccc                                                      <  2:181589/150‑1 (MQ=255)
                                                                                               cTGTTGATGGCTGGCCAGCGCCTGGCCCTCCCTCCCGAGTAACTGCGGCCGTCGTa                                                                                                                                                   >  2:948793/1‑56 (MQ=255)
                                                                                               cTGTTGATGGCTGGCCAGCGCCTGGCCCGCCCTCCCGAGTAACGGCGGCCGTCGTAGGAGCGGGTTTGCCCGCGAAGAGGCCGGCCATGCAAATCACTCCCCGCCCACCGTTCACCGTTGCCGCCGCCACGTGATTCGCGGGTAAACCCg                                                     <  2:16701/150‑1 (MQ=25)
                                                                                               cTGTTGATGGCTCGCCAGCGCCTGGCCCTCCCTCCCGAGTAACTGCGGCCGTCGTa                                                                                                                                                   <  1:948793/56‑1 (MQ=255)
                                                                                                tGTTGATGGCTGGCCAGCGCCTGGCCCTCCCTCCCGAGTAACTGCGGCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGACCTGCTAATCAATCTCCACCCACCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGc                                                    >  2:1495346/1‑150 (MQ=255)
                                                                                                 gTTGATGGCTGGCCAGCGCCTGGCCCTCCCTCCCGAGTAACTGCGGCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGACCTGCTAATCAATCTCCACCCACCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAAcc                                                       <  1:1389308/146‑1 (MQ=255)
                                                                                                    gATGGCTGGCCAGCGCCTGGCCCTCCCTCCCGAGTAACTGCGGCCGTCGTAGGAGCGGGTTTACCCGCGAagag                                                                                                                            <  1:474851/74‑1 (MQ=255)
                                                                                                    gATGGCTGGCCAGCGCCTGGCCCTCCCTCCCGAGTAACTGCGGCCGTCGTAGGAGCGGGTTTACCCGCGAagag                                                                                                                            >  2:474851/1‑74 (MQ=255)
                                                                                                    gATGGCTGGCCAGCGCCTGGCCCTCCCTCCCGAGTAACTGCGGCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGACCTGCTAATCAATCTCCACCCACCGTTCACCGTTgccgccgc                                                                            <  2:1154595/122‑1 (MQ=255)
                                                                                                     aTGGCTGGCCAGCGCCTGGCCCTCCCTCCCGAGTAACTGCGGCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGACCTGCTAATCAATCTCCACCCACCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTa                                               <  2:709772/150‑1 (MQ=255)
                                                                                                        gctggcCAGCGCCTGGCCCTCCCTCCCGAGTAACTGCGGCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGACCTGCTAATCAATCTCCACCCACCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTacac                                            <  1:1644144/150‑1 (MQ=255)
                                                                                                         ctggcCAGCGCCTGGCCCTCCCTCCCGAGTAACTGCGGCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGACCTGCTAATCAATCTCCACCCACCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTAcaca                                           >  1:976135/1‑150 (MQ=255)
                                                                                                          tggcCAGCGCCTGGCCCTCCCTCCCGAGTAACTGCGGCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGACCTGCTAATCAATCTCCACCCACCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACAt                                          >  2:241773/1‑150 (MQ=255)
                                                                                                            gcCAGCGCCTGGCCCTCCCTCCCGAGTAACCGCGGCCGTCGTAGGAGCAGGTATACCCGCGAAGAGGCCGGACCTGCTAATCAATCTCCACCCACCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACATAg                                        <  2:239849/150‑1 (MQ=255)
                                                                                                             ccAGCGCCTGGCCCTCCCTCCCGAGTAACTGCGGCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGACCTGCTAATCAATCTccac                                                                                                   >  2:531776/1‑90 (MQ=255)
                                                                                                              cAGCGCCTGGCCCTCCCTCCCGAGTAACTGCGGCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGACCTGCTAATCAATCTCCACCCACCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACATAGGc                                      >  1:535759/1‑150 (MQ=255)
                                                                                                               aGCGCCTGGCCCTCCCTCCCGAGTAACTGCGGCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGACCTGCTAATCAATCTCCACCCACCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACATAGGCa                                     >  1:654125/1‑150 (MQ=255)
                                                                                                               aGCGCCTGGCCCTCCCTCCCGAGTAACTGCGGCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGACCTGCTAATCAATCTCCACCCACCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACATAGGCa                                     >  1:971788/1‑150 (MQ=255)
                                                                                                                    cTGGCCCTCCCTCCCGAGTAACTGCGGCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGACCTGCTAATCAATCTCCACCCACCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACATAg                                        <  2:1625850/142‑1 (MQ=255)
                                                                                                                    cTGGCCCTCCCTCCCGAGTAACTGCGGCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGACCTGCTAATCAATCTCCACCCACCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACATAg                                        >  1:1625850/1‑142 (MQ=255)
                                                                                                                    cTGGCCCTCCCTCCCGAGTAACTGCGGCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGACCTGCTAATCAATCTCCACCCACCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACATAGGCACCAgc                                >  2:1294777/1‑150 (MQ=255)
                                                                                                                    cTGGCCCTCCCTCCCGAGTAACTGCGGCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGACCTGCTAATCAATCTCCACCCACCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACATAGGCACCAgc                                >  2:1151591/1‑150 (MQ=255)
                                                                                                                     tGGCCCTCCCTCCCGAGTAACTGCGGCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGACCTGCTAATCAATCTCCACCCACCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGc                                                    >  1:89092/1‑129 (MQ=255)
                                                                                                                      ggCCCTCCCTCCCGAGTAACTGCGGCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGACCTGCTAATCAATCTCCACCCACCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACATAGGCACCAgcgc                              >  1:1336416/1‑150 (MQ=255)
                                                                                                                      ggCCCTCCCTCCCGAGTAACTGCGGCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGACCTGCTAATCAATCTCCACCCACCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACATAGGCACCAgcgc                              <  1:53424/150‑1 (MQ=255)
                                                                                                                        ccctccctCCCGAGTAACTGCGGCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGACCTGCTAATCAATCTCCACCCACCGTTCACCGTTGCCGCCGCCACCGTATTcgc                                                                <  1:1129239/114‑1 (MQ=255)
                                                                                                                        ccctccctCCCGAGTAACTGCGGCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGACCTGCTAATCAATCTCCACCCACCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCt                                                   >  2:824979/1‑127 (MQ=255)
                                                                                                                         cctccctcCCGAGTAACTGCGGCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGACCTGCTAATCAATCTCCACCCACCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACATAGGCAc                                    >  1:1378034/1‑141 (MQ=255)
                                                                                                                         cctccctcCCGAGTAACTGCGGCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGACCTGCTAATCAATCTCCACCCACCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACATAGGCAc                                    <  2:1378034/141‑1 (MQ=255)
                                                                                                                         cctccctcCCGAGTAACTGCGGCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGACCTGCTAATCAATCTCCACCCACCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACATAGGCACCAGCGCCTc                           >  1:893920/1‑150 (MQ=255)
                                                                                                                              ctcccGAGTAACTGCGGCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGACCTGCTAATCAATCTCCACCCACCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTac                                              >  2:253544/1‑126 (MQ=255)
                                                                                                                              ctcccGAGTAACTGCGGCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGACCTGCTAATCAATCTCCACCCACCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTac                                              <  1:253544/126‑1 (MQ=255)
                                                                                                                                cccGAGTAACTGCGGCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGACCTGc                                                                                                                 <  1:1433464/57‑1 (MQ=255)
                                                                                                                                cccGAGTAACTGCGGCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGACCTGc                                                                                                                 >  2:1433464/1‑57 (MQ=255)
                                                                                                                                       aaCTGCGGCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGACCTGCTAATCAATCTCCACCCACCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCTTACACATAGGCACCAGCGCCTCGACCATATACAcaa             <  1:543553/150‑1 (MQ=255)
                                                                                                                                          tGCGGCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGACCTGCTAATCAATCTCCACCCACCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACATAGGCACCAGCGCCTCGACCATATACAcaatca          >  2:773559/1‑150 (MQ=255)
                                                                                                                                            cGGCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGACCTGCTAATCAATCTCCACCCACCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACATAGGCACCAGCGCCTCGACCATATACAcaatcaat        <  1:1495346/150‑1 (MQ=255)
                                                                                                                                             ggCCGTCGGAGGAGCGGGTTTACCCGCGAAGAGGCCGGACCTGCTAATCAATCTCCACCCACCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACATAGGCACCAGCGCCTCGACCATATACACAATCAAtt       <  1:1583263/150‑1 (MQ=255)
                                                                                                                                              gCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGACCTGCTAATCAATCTCCACCCACCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACATAGGCACCAGCGCCTCGACCATATACACAATCAATTg      <  2:1634585/150‑1 (MQ=255)
                                                                                                                                                 gtcgtAGGAGCGGGTTTACCCGCGAAGAGGCCGGACCTGCTAATCAATCTCCACCCACCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACATAGGCACCAGCGCCTCGACCATATACACAATCAATTGGcc   >  2:486640/1‑150 (MQ=255)
                                                                                                                                                 gtaGTAGTAGCGGGTTTACCCGCGAAGAGGCCGGACCTGCTAATCAATCTCCACCCACCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACATAGGCACCAGCGCCTCGACCATATACACAATCAATTGGcc   <  2:1228296‑M1/147‑1 (MQ=255)
                                                                                                                                                  tcgtAGGAGCGGGTTTACCCGCGAAGAGGCCGGACCTGCTAATCAATCTCCACCCACCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACATAGGCACCAGCGCCTCGACCATATACACAATCAATTGGccc  <  2:922192/150‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
GTTGGGCGCAACTGCTGCAGGATGCCCAGCGAATCGATGCGCAGATCAAAGGGCAGGCTGAAGGTTCGCCGTGGATTGGCCTGGCGCGGCTGTCGCTGTTGATGGCTGGCCAGCGCCTGGCCCTCCCTCCCGAGTAACTGCGGCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGACCTGCTAATCAATCTCCACCCACCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACATAGGCACCAGCGCCTCGACCATATACACAATCAATTGGCCC  >  NC_002947/5460531‑5460826

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.