New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 550663736 (0.600)11 (0.240) 9/182 NT 24.6% intergenic (+48/‑151) PP_4839/cycA iron‑regulated membrane protein/D‑alanine/beta‑alanine/D‑serine/glycine permease
?NC_002947 = 5506650 40 (0.880)intergenic (+61/‑138) PP_4839/cycA iron‑regulated membrane protein/D‑alanine/beta‑alanine/D‑serine/glycine permease

Only 100 of 105 total aligned reads displayed.

GTGCTGGGGGTGATGTTCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCAGCC  >  NC_002947/5506488‑5506786
                                                                                                                                                     |                                                                                                                                                     
gtgctggGGGTGATGTTCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTAC                                                                                                                                                       >  1:325906‑M1/1‑150 (MQ=255)
   ctggGGGTGATGTTCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAg                                                                                                                                                    <  1:91944/150‑1 (MQ=255)
    tggGGGTGATGTTCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAgg                                                                                                                                                   <  2:1587265/150‑1 (MQ=255)
       gggTGATGTTCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAc                                                                                                                                                >  2:453966/1‑150 (MQ=255)
               ttCCGGGTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACaacgcggtccctcgt                                                                                                                                        <  1:473969‑M1/150‑16 (MQ=255)
               ttCCCGGTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGACGCGAGTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTACCGGCATCTTCGCGGGTAAACCCGCTCCTACaacgcggtccctcgt                                                                                                                                        <  1:516218‑M1/150‑16 (MQ=255)
                tCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTgta                                                                                                                                       >  1:453966‑M2/1‑147 (MQ=255)
                ccccGGTGCTGGAGGTGACGATGGTGGTGATGAGGCGGGAGGGCGGGGTCTGGGTTAGGCGCCGCCGGGTCTCACCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGTCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTa                                                                                                                                       <  1:1185610/149‑1 (MQ=19)
                 cccGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGTTGGAGAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTgtag                                                                                                                                      >  2:1620778‑M2/1‑146 (MQ=255)
                 cccGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTgtag                                                                                                                                      <  2:127278‑M2/150‑5 (MQ=255)
                    gCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTgtaggag                                                                                                                                   <  1:1608132‑M2/150‑8 (MQ=255)
                       ggtggGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTgtaggagcgg                                                                                                                                >  1:222136‑M2/1‑140 (MQ=255)
                        gtggGGGTGTCGATGGTGGTGTTGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTgtaggagcggg                                                                                                                               >  1:1301496‑M2/1‑139 (MQ=255)
                        gtggGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACaacgcggtccctcgtaggagcggg                                                                                                                               <  2:1356282‑M1/150‑25 (MQ=255)
                         tggGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTgtaggagcgggt                                                                                                                              >  2:1262376‑M2/1‑138 (MQ=255)
                             ggTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTgtaggagcgggtttac                                                                                                                          <  1:1542222‑M2/150‑17 (MQ=255)
                               ggtcGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTgtaggagcgggtttaccc                                                                                                                        >  1:173961‑M2/2‑132 (MQ=255)
                                 tCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTgtaggagcgggtttacccgc                                                                                                                      <  2:618185‑M2/150‑21 (MQ=255)
                                 tCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTgtaggagcgg                                                                                                                                <  2:829968‑M2/140‑11 (MQ=255)
                                 tCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTgtaggagcgg                                                                                                                                >  1:829968‑M2/1‑130 (MQ=255)
                                  cGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCGTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGGGACCGCGTTgtaggagcgggtttacccgcg                                                                                                                     >  2:1153768‑M2/1‑129 (MQ=255)
                                  cGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACaacgcggtccctcgtaggagcgg                                                                                                                                <  1:1425660‑M1/139‑24 (MQ=255)
                                  cGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACaacgcggtccctcgtaggagcgg                                                                                                                                >  2:1425660‑M1/1‑116 (MQ=255)
                                    aTGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCTTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTgtaggagcgggtttacccgcgaa                                                                                                                   <  2:140742‑M2/150‑24 (MQ=255)
                                       gtggtgATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACaacgcggtccctcgtaggagcgggtttaccc                                                                                                                        <  2:1160597‑M1/142‑32 (MQ=255)
                                       gtggtgATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACaacgcggtccctcgtaggagcgggtttaccc                                                                                                                        >  1:1160597‑M1/1‑111 (MQ=255)
                                        tggtgATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACaacgcggtccctcgt                                                                                                                                        <  2:58446‑M1/125‑16 (MQ=255)
                                           tgATGTGGGGGGTGGATAGTTTGGTGGTGGGGCGCTGCCGGGTCTTGGCCAGCGTTTGAGCCTTGTGTTGCGTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCg                                                                                                            <  2:499879/150‑1 (MQ=255)
                                           tgATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTg                                                                                                                                         <  1:170178‑M2/121‑2 (MQ=255)
                                                  gggggTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAgg                                                                                                     >  1:417844/1‑150 (MQ=255)
                                                  gggggTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAgg                                                                                                     <  2:325906/150‑1 (MQ=255)
                                                      gTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGaa                                                                                                 >  1:655452/1‑150 (MQ=255)
                                                          aTAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGc                                                                                             <  1:44494/150‑1 (MQ=255)
                                                             ttttGGTGGGGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTCGCCTGTCCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGa                                                                                          <  2:1569373/149‑1 (MQ=255)
                                                              tttGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATgagatc                                                                                         >  1:945971/1‑145 (MQ=255)
                                                               ttGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTGGCGGCTAAACCCGCTGCTACGAGGGACCGCGTTGTAGGAGCGGGTTTTCCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGc                                                                                        <  2:1443917/150‑1 (MQ=255)
                                                                tggtggTGAGGCGCCGCCGGGTGTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGcc                                                                                       <  2:655452/150‑1 (MQ=255)
                                                                  gtggtgAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTgtaggagcgggtttac                                                                                                                          <  2:1428077‑M2/113‑17 (MQ=255)
                                                                  gtggtgAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTgtaggagcgggtttac                                                                                                                          >  1:1428077‑M2/1‑97 (MQ=255)
                                                                         ggCGCCGCCGGGTGTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCa                                                                              <  2:1496018/150‑1 (MQ=255)
                                                                                     tCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCCCCTACGAGGGACCGAGTTGTAGGAGCGGGGTTACCCGCGAAGAGGCCGGTCCAGGCGACATGCTGAGGCGAAAATGCAGAGGAGATCTGt                                                                  >  1:413442/1‑150 (MQ=37)
                                                                                             aGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACaacgcggtccctcgtaggagcgggt                                                                                                                              >  2:240632‑M1/1‑57 (MQ=255)
                                                                                             aGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACaacgcggtccctcgtaggagcgggt                                                                                                                              <  1:240632‑M1/82‑26 (MQ=255)
                                                                                             aGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGa                                                                                          <  1:828331/118‑1 (MQ=255)
                                                                                             aGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGa                                                                                          >  2:828331/1‑118 (MQ=255)
                                                                                                 cTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATc                                                      <  2:1608132/150‑1 (MQ=255)
                                                                                                  ttGAGCCTTTTGTTGCCTGTGCTGGCCTCTTCGCGGGGAAACCCTCTCCTACGACGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCt                                                     >  1:1440140/1‑150 (MQ=255)
                                                                                                    gAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGa                                                                                          >  1:961163/1‑111 (MQ=255)
                                                                                                    gAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGa                                                                                          <  2:961163/111‑1 (MQ=255)
                                                                                                          tgtgTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAAcgcg                                             <  2:1513186/150‑1 (MQ=255)
                                                                                                           gtgtTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTgtaggagcggg                                                                                                                               <  2:576745‑M2/67‑12 (MQ=255)
                                                                                                           gtgtTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTgtaggagcggg                                                                                                                               >  1:576745‑M2/1‑56 (MQ=255)
                                                                                                           gtgtTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAAcgcgc                                            <  2:1542222/150‑1 (MQ=255)
                                                                                                             gtTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCgt                                          <  1:127278/150‑1 (MQ=255)
                                                                                                              ttGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCgtg                                         >  2:928507/1‑150 (MQ=255)
                                                                                                                 ccTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAAcgcgcg                                           <  1:1542946/145‑1 (MQ=255)
                                                                                                                 ccTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAAcgcgcg                                           >  2:1542946/1‑145 (MQ=255)
                                                                                                                     tgCTGGCCAATTAGCGGGTAATCGTGCTGCTGCGTGGGACCGCGTTGTAGGAGCGGGGTGACCCGCGAAGAAGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTtagcct                                  >  2:920094/1‑150 (MQ=255)
                                                                                                                        agctctctTCGCGGGTAAACCCGCTCCTACGAGGGACCGGGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTtagcctagc                               <  1:1631467/146‑1 (MQ=255)
                                                                                                                          gCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGc                                                                                        >  2:1104932/1‑91 (MQ=255)
                                                                                                                          gCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGc                                                                                        <  1:1104932/91‑1 (MQ=255)
                                                                                                                          gCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCg                             >  2:1323409/1‑150 (MQ=255)
                                                                                                                           cttctTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCgg                            <  1:140742/148‑1 (MQ=255)
                                                                                                                             tctTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGGTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGGGAGTtggcctagccaggt                          >  2:1631467/1‑146 (MQ=38)
                                                                                                                               ttCGCGGGTAAACCCGCTCCTACaacgcggtccctcgtaggagcgggtttacccgcgaagaagccagcacaggcaacacaaggctcaagcgctggccaagacccggcggcgcctcaccaccaaactatccaccccccacatcaccaccat                        <  2:140742‑M1/150‑128 (MQ=255)
                                                                                                                                 cgcgGGTAAACCCGCTCCTACaacgcggtcccccgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaacgctcaagcgctggccaagacccggcggcgcctcaccaccaaactatccaccccccacatcaccaccatcg                      >  2:1153768‑M1/1‑21 (MQ=255)
                                                                                                                                  gcgGGTAAACCCGCTCCTACaacgcggtccctcgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgctggccaagacccggcggcgcctcaccaccaaactatccaccccccacatcaccaccatcga                     <  2:618185‑M1/150‑131 (MQ=255)
                                                                                                                                    gggTAAACCCGCTCCTACaacgcggtccctcgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgctggccaagacccggcggcgcctcaccaccaaactatccaccccccacatcaccaccatcgacc                   >  1:173961‑M1/1‑18 (MQ=255)
                                                                                                                                    gggTAAACCCGCTCCTACGAGGGACCGCGTTgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgctggccaagacccggcggcgcctcaccaccaaactatccaccccccacatcaccac                           >  1:1160597‑M2/1‑31 (MQ=255)
                                                                                                                                    gggTAAACCCGCTCCTACGAGGGACCGCGTTgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgctggccaagacccggcggcgcctcaccaccaaactatccaccccccacatcaccac                           <  2:1160597‑M2/142‑112 (MQ=255)
                                                                                                                                      gTAAACCCGCTCCTACaacgcggtccctcgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgctggccaagacccggcggcgcctcaccaccaaactatccaccccccacatcaccaccatcgacacc                 <  1:1542222‑M1/150‑135 (MQ=255)
                                                                                                                                      gTAAACCCGCTCCTACaacgcggtccctcgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgctggccaagacccggcggcgcctcaccac                                                      <  2:1428077‑M1/113‑98 (MQ=255)
                                                                                                                                      gTAAACCCGCTCCTACaacgcggtccctcgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgctggccaagacccggcggcgcctcaccac                                                      >  1:1428077‑M1/1‑16 (MQ=255)
                                                                                                                                          aCCCGCTCCTACaacgcggtccctcgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgctggccaagacccggcggcgcctcaccaccaaactatccaccccccacatcaccaccatcgacaccccca             >  2:1262376‑M1/1‑12 (MQ=255)
                                                                                                                                          aCCCGCTCCTACGAGGGACCGCGTTgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgct                                                                                 >  2:240632‑M2/1‑25 (MQ=255)
                                                                                                                                          aCCCGCTCCTACGAGGGACCGCGTTgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgct                                                                                 <  1:240632‑M2/82‑58 (MQ=255)
                                                                                                                                           cccGCTCCTACaacgcggtccctcgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgctggccaagacccggcggcgcctcaccaccaaactatccaccccccacaacaccaccatcgacacccccac            >  1:1301496‑M1/1‑11 (MQ=255)
                                                                                                                                           cccGCTCCTACaacgcggtccctcgtaggagcgggtttacccgcgaagaggccagcacaggcaacac                                                                                               >  1:576745‑M1/1‑11 (MQ=255)
                                                                                                                                           cccGCTCCTACaacgcggtccctcgtaggagcgggtttacccgcgaagaggccagcacaggcaacac                                                                                               <  2:576745‑M1/67‑57 (MQ=255)
                                                                                                                                           cccGCTCCTACGAGGGACCGCGTTgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgctggccaagacccggcggcgcctcaccaccaaactatccaccccccacatcaccaccatcgacacccccac            <  2:1356282‑M2/150‑127 (MQ=255)
                                                                                                                                            ccGCTCCTACaacgcggtccctcgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgctggccaagacccggcggcgcctcaccaccaaactatccaccccccacatcaccaccatcgacacccccacc           >  1:222136‑M1/1‑10 (MQ=255)
                                                                                                                                            ccGCTCCTACaacgcggtccctcgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgctggccaagacccggcggcgcctcaccaccaaactatccaccccccacatcaccaccatcga                     >  1:829968‑M1/1‑10 (MQ=255)
                                                                                                                                            ccGCTCCTACaacgcggtccctcgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgctggccaagacccggcggcgcctcaccaccaaactatccaccccccacatcaccaccatcga                     <  2:829968‑M1/140‑131 (MQ=255)
                                                                                                                                            ccGCTCCTACGAGGGACCGCGTTgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgctggccaagacccggcggcgcctcaccaccaaactatccaccccccacatcaccaccatcg                      >  2:1425660‑M2/1‑23 (MQ=255)
                                                                                                                                            ccGCTCCTACGAGGGACCGCGTTgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgctggccaagacccggcggcgcctcaccaccaaactatccaccccccacatcaccaccatcg                      <  1:1425660‑M2/139‑117 (MQ=255)
                                                                                                                                             cGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAagaaga          <  1:1323409/150‑1 (MQ=255)
                                                                                                                                               cTCCTACaacgcggtccctcgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgctggccaagacccggcggcgcctcaccaccaaactatccaccccccacatcaccaccatcgacacccccaccagc        <  1:1608132‑M1/150‑144 (MQ=255)
                                                                                                                                                tCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTg       >  2:443701/1‑150 (MQ=255)
                                                                                                                                                  cTACaacgcggtccctcgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgctggccaagacccggcggcgcctcaccaccaaactctccaacccccacatcaccaccatcgacacccccaccagcggg     >  2:1620778‑M1/1‑4 (MQ=255)
                                                                                                                                                  cTACaacgcggtccctcgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgctggccaagacccggcggcgcctcaccaccaaactatccaccccccacatcaccaccatcgacacccccaccagcggg     <  2:127278‑M1/150‑147 (MQ=255)
                                                                                                                                                  cTACGAGGGCCCGTGTTGTAGGCGCCGGTCTCCCGGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCa     <  1:563166/150‑1 (MQ=255)
                                                                                                                                                   tACaacgcggtccctcgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgctggccaagacccggcggcgcctcaccaccaaactatccaccccccacatcaccaccatcgacacccccaccagcggga    >  1:453966‑M1/1‑3 (MQ=255)
                                                                                                                                                    aCGAGGGACCGCGTTgtaggagcgggtttacccgcgaagatgccggtacaggcaacacaaggctcaagcgctggccaactcgcgtcggcgcctcaccaccaaactatccaccccccacatcaccaccatcgacacccccaccaccgggaa   <  1:516218‑M2/150‑136 (MQ=255)
                                                                                                                                                    aCGAGGGACCGCGTTgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgctggccaagacccggcggcgcctcaccaccaaactatccaccccccacatcaccaccatcgacacccccaccacccggaa   <  1:473969‑M2/150‑136 (MQ=255)
                                                                                                                                                    aCGAGGGACCGCGTTgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgctggccaagacccggcggcgcctcaccaccaaactatccaccccccacatcacca                            <  2:58446‑M2/125‑111 (MQ=255)
                                                                                                                                                    aCGAGGGACCGCGTTgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgctggccaagacccggcggcgcctcaccaccaaactatccaccccccacatcacca                            >  1:58446‑M2/1‑15 (MQ=255)
                                                                                                                                                    aCGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCa                                                                              >  2:821494/1‑75 (MQ=255)
                                                                                                                                                    aCGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCa                                                                              <  1:821494/75‑1 (MQ=255)
                                                                                                                                                     caacgcggtccctcgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgctggccaagacccggcggcgcctcaccaccaaactatccaccccccacatca                               >  2:170178‑M1/1‑1 (MQ=255)
                                                                                                                                                     cGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCAGcc  <  1:618185/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
GTGCTGGGGGTGATGTTCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCAGCC  >  NC_002947/5506488‑5506786

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.