New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5506637	36 (0.600)	11 (0.240)	9/182	NT	24.6%	intergenic (+48/‑151)	PP_4839/cycA	iron‑regulated membrane protein/D‑alanine/beta‑alanine/D‑serine/glycine permease
	?	NC_002947	= 5506650	40 (0.880)					intergenic (+61/‑138)	PP_4839/cycA	iron‑regulated membrane protein/D‑alanine/beta‑alanine/D‑serine/glycine permease

TCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCAGCCTATGACGC  >  NC_002947/5506504‑5506794                                                                                                                                                   |                                                                                                                                                 tCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTgta                                                                                                                                               >  1:453966‑M2/1‑147 (MQ=255) ccccGGTGCTGGAGGTGACGATGGTGGTGATGAGGCGGGAGGGCGGGGTCTGGGTTAGGCGCCGCCGGGTCTCACCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGTCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTa                                                                                                                                               <  1:1185610/149‑1 (MQ=19)  cccGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGTTGGAGAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTgtag                                                                                                                                              >  2:1620778‑M2/1‑146 (MQ=255)  cccGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTgtag                                                                                                                                              <  2:127278‑M2/150‑5 (MQ=255)     gCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTgtaggag                                                                                                                                           <  1:1608132‑M2/150‑8 (MQ=255)        ggtggGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTgtaggagcgg                                                                                                                                        >  1:222136‑M2/1‑140 (MQ=255)         gtggGGGTGTCGATGGTGGTGTTGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTgtaggagcggg                                                                                                                                       >  1:1301496‑M2/1‑139 (MQ=255)          tggGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTgtaggagcgggt                                                                                                                                      >  2:1262376‑M2/1‑138 (MQ=255)              ggTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTgtaggagcgggtttac                                                                                                                                  <  1:1542222‑M2/150‑17 (MQ=255)                ggtcGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTgtaggagcgggtttaccc                                                                                                                                >  1:173961‑M2/2‑132 (MQ=255)                  tCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTgtaggagcgggtttacccgc                                                                                                                              <  2:618185‑M2/150‑21 (MQ=255)                  tCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTgtaggagcgg                                                                                                                                        >  1:829968‑M2/1‑130 (MQ=255)                  tCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTgtaggagcgg                                                                                                                                        <  2:829968‑M2/140‑11 (MQ=255)                   cGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCGTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGGGACCGCGTTgtaggagcgggtttacccgcg                                                                                                                             >  2:1153768‑M2/1‑129 (MQ=255)                     aTGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCTTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTgtaggagcgggtttacccgcgaa                                                                                                                           <  2:140742‑M2/150‑24 (MQ=255)                            tgATGTGGGGGGTGGATAGTTTGGTGGTGGGGCGCTGCCGGGTCTTGGCCAGCGTTTGAGCCTTGTGTTGCGTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCg                                                                                                                    <  2:499879/150‑1 (MQ=255)                            tgATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGGCCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCg                                                                                                                    <  2:1332650/150‑1 (MQ=255)                            tgATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTg                                                                                                                                                 <  1:170178‑M2/121‑2 (MQ=255)                            tgATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTg                                                                                                                                                 >  2:170178‑M2/1‑120 (MQ=255)                                   gggggTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAgg                                                                                                             >  1:417844/1‑150 (MQ=255)                                   gggggTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAgg                                                                                                             <  2:325906/150‑1 (MQ=255)                                       gTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGaa                                                                                                         >  1:655452/1‑150 (MQ=255)                                           aTAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGc                                                                                                     <  1:44494/150‑1 (MQ=255)                                              ttttGGTGGGGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTCGCCTGTCCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGa                                                                                                  <  2:1569373/149‑1 (MQ=255)                                               tttGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATgagatc                                                                                                 >  1:945971/1‑145 (MQ=255)                                                ttGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTGGCGGCTAAACCCGCTGCTACGAGGGACCGCGTTGTAGGAGCGGGTTTTCCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGc                                                                                                <  2:1443917/150‑1 (MQ=255)                                                 tggtggTGAGGCGCCGCCGGGTGTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGcc                                                                                               <  2:655452/150‑1 (MQ=255)                                                   gtggtgAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTgtaggagcgggtttac                                                                                                                                  <  2:1428077‑M2/113‑17 (MQ=255)                                                   gtggtgAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTgtaggagcgggtttac                                                                                                                                  >  1:1428077‑M2/1‑97 (MQ=255)                                                          ggCGCCGCCGGGTGTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCa                                                                                      <  2:1496018/150‑1 (MQ=255)                                                                      tCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCCCCTACGAGGGACCGAGTTGTAGGAGCGGGGTTACCCGCGAAGAGGCCGGTCCAGGCGACATGCTGAGGCGAAAATGCAGAGGAGATCTGt                                                                          >  1:413442/1‑150 (MQ=37)                                                                              aGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGa                                                                                                  >  2:828331/1‑118 (MQ=255)                                                                              aGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGa                                                                                                  <  1:828331/118‑1 (MQ=255)                                                                                  cTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATc                                                              <  2:1608132/150‑1 (MQ=255)                                                                                   ttGAGCCTTTTGTTGCCTGTGCTGGCCTCTTCGCGGGGAAACCCTCTCCTACGACGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCt                                                             >  1:1440140/1‑150 (MQ=255)                                                                                    tGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTg                                                            <  2:963258/150‑1 (MQ=255)                                                                                     gAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGa                                                                                                  >  1:961163/1‑111 (MQ=255)                                                                                     gAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGa                                                                                                  <  2:961163/111‑1 (MQ=255)                                                                                           tgtgTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAAcgcg                                                     <  2:1513186/150‑1 (MQ=255)                                                                                            gtgtTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTgtaggagcggg                                                                                                                                       <  2:576745‑M2/67‑12 (MQ=255)                                                                                            gtgtTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTgtaggagcggg                                                                                                                                       >  1:576745‑M2/1‑56 (MQ=255)                                                                                            gtgtTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAAcgcgc                                                    <  2:1542222/150‑1 (MQ=255)                                                                                              gtTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCgt                                                  <  1:127278/150‑1 (MQ=255)                                                                                               ttGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCgtg                                                 >  2:928507/1‑150 (MQ=255)                                                                                                  ccTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAAcgcgcg                                                   >  2:1542946/1‑145 (MQ=255)                                                                                                  ccTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAAcgcgcg                                                   <  1:1542946/145‑1 (MQ=255)                                                                                                      tgCTGGCCAATTAGCGGGTAATCGTGCTGCTGCGTGGGACCGCGTTGTAGGAGCGGGGTGACCCGCGAAGAAGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTtagcct                                          >  2:920094/1‑150 (MQ=255)                                                                                                         agctctctTCGCGGGTAAACCCGCTCCTACGAGGGACCGGGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTtagcctagc                                       <  1:1631467/146‑1 (MQ=255)                                                                                                           gCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGc                                                                                                >  2:1104932/1‑91 (MQ=255)                                                                                                           gCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGc                                                                                                <  1:1104932/91‑1 (MQ=255)                                                                                                           gCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCg                                     >  2:1323409/1‑150 (MQ=255)                                                                                                            cttctTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCgg                                    <  1:140742/148‑1 (MQ=255)                                                                                                              tctTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGGTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGGGAGTtggcctagccaggt                                  >  2:1631467/1‑146 (MQ=38)                                                                                                                     gggTAAACCCGCTCCTACGAGGGACCGCGTTgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgctggccaagacccggcggcgcctcaccaccaaactatccaccccccacatcaccac                                   <  2:1160597‑M2/142‑112 (MQ=255)                                                                                                                     gggTAAACCCGCTCCTACGAGGGACCGCGTTgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgctggccaagacccggcggcgcctcaccaccaaactatccaccccccacatcaccac                                   >  1:1160597‑M2/1‑31 (MQ=255)                                                                                                                           aCCCGCTCCTACGAGGGACCGCGTTgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgct                                                                                         <  1:240632‑M2/82‑58 (MQ=255)                                                                                                                           aCCCGCTCCTACGAGGGACCGCGTTgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgct                                                                                         >  2:240632‑M2/1‑25 (MQ=255)                                                                                                                            cccGCTCCTACGAGGGACCGCGTTgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgctggccaagacccggcggcgcctcaccaccaaactatccaccccccacatcaccaccatcgacacccccac                    <  2:1356282‑M2/150‑127 (MQ=255)                                                                                                                             ccGCTCCTACGAGGGACCGCGTTgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgctggccaagacccggcggcgcctcaccaccaaactatccaccccccacatcaccaccatcg                              >  2:1425660‑M2/1‑23 (MQ=255)                                                                                                                             ccGCTCCTACGAGGGACCGCGTTgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgctggccaagacccggcggcgcctcaccaccaaactatccaccccccacatcaccaccatcg                              <  1:1425660‑M2/139‑117 (MQ=255)                                                                                                                              cGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAagaaga                  <  1:1323409/150‑1 (MQ=255)                                                                                                                                 tCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTg               >  2:443701/1‑150 (MQ=255)                                                                                                                                   cTACGAGGGCCCGTGTTGTAGGCGCCGGTCTCCCGGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCa             <  1:563166/150‑1 (MQ=255)                                                                                                                                     aCGAGGGACCGCGTTgtaggagcgggtttacccgcgaagatgccggtacaggcaacacaaggctcaagcgctggccaactcgcgtcggcgcctcaccaccaaactatccaccccccacatcaccaccatcgacacccccaccaccgggaa           <  1:516218‑M2/150‑136 (MQ=255)                                                                                                                                     aCGAGGGACCGCGTTgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgctggccaagacccggcggcgcctcaccaccaaactatccaccccccacatcaccaccatcgacacccccaccacccggaa           <  1:473969‑M2/150‑136 (MQ=255)                                                                                                                                     aCGAGGGACCGCGTTgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgctggccaagacccggcggcgcctcaccaccaaactatccaccccccacatcacca                                    >  1:58446‑M2/1‑15 (MQ=255)                                                                                                                                     aCGAGGGACCGCGTTgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgctggccaagacccggcggcgcctcaccaccaaactatccaccccccacatcacca                                    <  2:58446‑M2/125‑111 (MQ=255)                                                                                                                                     aCGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCa                                                                                      <  1:821494/75‑1 (MQ=255)                                                                                                                                     aCGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCa                                                                                      >  2:821494/1‑75 (MQ=255)                                                                                                                                      cGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCAGcc          <  1:618185/150‑1 (MQ=255)                                                                                                                                       gAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGccc                                                                   <  2:634250/92‑1 (MQ=255)                                                                                                                                       gAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGccc                                                                   >  1:634250/1‑92 (MQ=255)                                                                                                                                       gAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCAGCCt         >  2:391042/1‑150 (MQ=255)                                                                                                                                              cgcgTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCATCCTATGACGc  >  2:619104/1‑150 (MQ=255)                                                                                                                                               gcgTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCt                                                                                                    >  2:1347850/1‑51 (MQ=255)                                                                                                                                               gcgTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCt                                                                                                    <  1:1347850/51‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                 TCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCAGCCTATGACGC  >  NC_002947/5506504‑5506794

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.