New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5816900 =	51 (0.850)	14 (0.250)	10/222	NT	24.7%	intergenic (+30/+99)	PP_5092/pilT	NLP/P60 protein/twitching motility protein
	?	NC_002947	5816983 =	38 (0.690)					intergenic (+113/+16)	PP_5092/pilT	NLP/P60 protein/twitching motility protein

CACGCCGTGGCAAGCGGGTGAGTATCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAAC  >  NC_002947/5816752‑5817041                                                                                                                                                     |                                                                                                                                              cacgcCGTGGCAAGCGGGTGAGTATCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCtt                                                                                                                                              >  1:553575/1‑150 (MQ=255)  gtaacctggttcgggaggggcggttggcgcagttgtcttcagtgatgcagggcggggcggcggaggggatgctgacgatggagggggcgttgcggaggctgagggagcgagggttgatcaaaggcttgtagtacctgcaaaggccctTTc                                                                                                                                             >  1:1047453‑M1/148‑150 (MQ=255)    gcCGTGGCAAGCGGGTGAGTATCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGGCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGATCACAGGCCCTATCTGGTACCGGCCCCTTcgc                                                                                                                                           >  1:360220/1‑150 (MQ=255)      cctggttcgggaggggcggttggcgcagttgtcttcagtgatgcagggcggggcggcggaggggatgctgacgatggagggggcgttgcggaggctgagggagcgagggttgatcaaaggcttgtagtacctgcaaaggccctTTCGCgg                                                                                                                                         <  2:1401499‑M1/7‑1 (MQ=255)      cGTGGCAAGCGGGTGAGTATCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCgg                                                                                                                                         <  2:460509/150‑1 (MQ=255)       ctggttcgggaggggcggttggcgcagttgtcttcagtgatgcagggcggggcggcggaggggatgctgacgatggagggggcgttgcggaggctgagggagcgagggttgatcaaaggcttgtagtacctgcaaaggccctTTCGCggg                                                                                                                                        <  1:1254116‑M1/8‑1 (MQ=255)       ctggttcgggaggggcggttggcgcagttgtcttcagtgatgcagggcgcggcggcggaggggatgctgacgatggagggggcgttgcggaggctgagggagcgagggttgatcaaaggcttgtagtacctgcaaaggccctTTCGCggg                                                                                                                                        >  1:1439342‑M1/143‑150 (MQ=255)        tggttcgggaggggcggttggcgcagttgtcttcagtgatgcagggcggggcggcggaggggatgctgacgatggagggggcgttgcggaggctgagggagcgagggttgatcaaaggctggtagtacctgcaaaggccctTTCGCGGGc                                                                                                                                       <  1:617312‑M1/9‑1 (MQ=255)          gCAAGCGGGTGAGTATCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGcgc                                                                                                                                     <  2:1539405/150‑3 (MQ=255)            aaGCGGGTGAGTATCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGcgtgc                                                                                                                                   >  1:342071/1‑146 (MQ=255)            aaGCGGGTGAGTATCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGc                                                                                                                                   <  2:1580091/150‑1 (MQ=255)            aaGCGGGTGAGTATCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGc                                                                                                                                   >  2:1284950/1‑150 (MQ=255)              gCGGGTGAGTATCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGccc                                                                                                                                 <  1:1616592/150‑1 (MQ=255)                  gTGAGTATCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTc                                                                                                                             >  2:731253/1‑150 (MQ=255)                  gTGAGTATCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTc                                                                                                                             >  1:627656/1‑150 (MQ=255)                    gAGTATCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCGTGCCCGcgaag                                                                                                                           <  2:342071/150‑5 (MQ=255)                        aTCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAg                                                                                                                       <  1:899534/150‑1 (MQ=255)                                cTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGcgcg                                                                                                               >  1:938978/1‑150 (MQ=255)                                   gAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCg                                                                                                            <  2:627656/150‑1 (MQ=255)                                     gCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGct                                                                                                          >  1:1279023/1‑150 (MQ=255)                                       ttcagtgatgcagggcggggcggcggaggggatgctgacgatggagggggcgttgcggaggctgagggagcgagggttgatcaaaggcttgtagtacctgcaaaggccctTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGctct                                                                                                        <  2:256153‑M1/40‑1 (MQ=255)                                       ttcagtgatgcagggcggggcggcggaggggatgctgacgatggagggggcgttgcggaggctgagggagcgagggttgatcaaaggcttgtagtacctgcaaaggccccTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGctct                                                                                                        <  2:84254‑M1/40‑1 (MQ=255)                                          ccTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCt                                                                                                                              <  2:217797/125‑1 (MQ=255)                                          ccTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCt                                                                                                                              >  1:217797/1‑125 (MQ=255)                                          ccTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTcgc                                                                                                     <  2:553575/150‑1 (MQ=255)                                           cTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGctc                                                                                                         >  2:870258/1‑145 (MQ=255)                                           cTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGctc                                                                                                         <  1:870258/145‑1 (MQ=255)                                                tGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAg                                                                                               <  2:1279023/150‑1 (MQ=255)                                                gcagggcggggcggcggaggggatgctgacgatggagggggcgttgcggaggctgagggagcgagggttgatcaaaggcttgtagtacctgcaaaggccctTTc                                                                                                                                             >  1:350118‑M1/102‑104 (MQ=255)                                                gcagggcggggcggcggaggggatgctgacgatggagggggcgttgcggaggctgagggagcgagggttgatcaaaggcttgtagtacctgcaaaggccctTTc                                                                                                                                             <  2:350118‑M1/3‑1 (MQ=255)                                                  agggcggggcggcggaggggatgctgacgatggagggggcgttgcggaggctgagggagcgagggttgatcaaaggcttgtagtacctgcaaaggccctTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCt                                                                                             <  2:634275‑M1/51‑1 (MQ=255)                                                    aGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTcc                                                                                           >  2:276792/1‑149 (MQ=255)                                                       aGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACAt                                                                                        <  1:1387583/150‑1 (MQ=255)                                                        gCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCCGGCACGCCCGCTCCCACACGTAGCGCGTCGCTCTCGCGCGCAGCCcacctc                                                                                       >  2:617312/1‑147 (MQ=255)                                                         ggcggcggaggggatgctgacgatggagggggcgttgcggaggctgagggagcgagggttgatcaaaggcttgtagtacctgcaaaggccctTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATAc                                                                                      >  2:1254116‑M1/93‑150 (MQ=255)                                                         cACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATAc                                                                                      <  2:954123/150‑1 (MQ=255)                                                              cggtggggatgctgacgatggagggggcgttgcggaggctgagggagcgagggttgatcaaaggcttgtagtacctgcaaaggccccTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCtgtg                                                                                 >  1:561681‑M1/88‑150 (MQ=255)                                                              cGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCtgtg                                                                                 <  2:702973/150‑1 (MQ=255)                                                               gtggtgGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTgg                                                                                <  1:731253/150‑1 (MQ=255)                                                               gtggtgGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTgg                                                                                <  1:394217/150‑1 (MQ=255)                                                               ggaggggatgctgacgatggagggggcgttgcggaggctgagggagcgagggttgatcaaaggcttgtagtacctgcaaaggccctTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTgg                                                                                >  1:634275‑M1/87‑150 (MQ=255)                                                               ggaggggatgctgacgatggagggggcgttgcggaggctgagggagcgagggttgatcaaaggcttgtagtacctgcaaaggccctTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTgg                                                                                >  1:256153‑M1/87‑150 (MQ=255)                                                                  ggggatgctgacgatggagggtgcgttgcggaggctgagggagcgagggttgatcaaaggcttgtagtacctgcaaaggccccTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAg                                                                             >  1:84254‑M1/84‑150 (MQ=255)                                                                                  tgcCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGGACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCcgcgca                                                             >  1:531214/1‑148 (MQ=255)                                                                                  tgcCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCACGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGaa                                                             >  1:531707/1‑150 (MQ=255)                                                                                   gcCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGaaa                                                            >  1:1467240/1‑150 (MQ=255)                                                                                      gAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAggg                                                         >  1:803615/1‑150 (MQ=255)                                                                                      gAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCAAGCCCGATCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAggg                                                         >  2:545636/1‑150 (MQ=255)                                                                                            gcagcagcTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGgcgc                                                                      <  2:603727/131‑1 (MQ=255)                                                                                            gcagcagcTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGgcgc                                                                      >  1:603727/1‑131 (MQ=255)                                                                                            gcagcagcTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTg                                                   >  2:1415074/1‑150 (MQ=255)                                                                                            gcagcagcTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCCCGGGCCCGCCCGCTCCCACCCCGAGCGCGCCGCCCTCACCCGCCGCTCCCACCCCCGTGGGCACGAGGACGCCCGCGAACggcactatg                                                   >  2:1582939/1‑143 (MQ=255)                                                                                               gcagcTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAg                                                <  1:1284950/150‑1 (MQ=255)                                                                                               gcagcTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAg                                                >  1:1187754/1‑150 (MQ=255)                                                                                                cagcTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAgg                                               <  2:153657/150‑1 (MQ=255)                                                                                                 agcTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGt                                              <  2:1187754/150‑1 (MQ=255)                                                                                                      gagggagcgagggttgatcaaaggcttgtagtacctgcaaaggccctTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTgg                                                                                <  1:288097‑M1/64‑1 (MQ=255)                                                                                                      gagggagcgagggttgatcaaaggcttgtagtacctgcaaaggccctTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTgg                                                                                >  2:288097‑M1/48‑111 (MQ=255)                                                                                                         ggagcgagggttgatcaaaggcttgtagtacctgcaaaggccctTTCGCGGGCGCGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTcac                                                                                          <  1:92708‑M1/54‑1 (MQ=255)                                                                                                         ggagcgagggttgatcaaaggcttgtagtacctgcaaaggccctTTCGCGGGCGCGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTcac                                                                                          >  2:92708‑M1/45‑98 (MQ=255)                                                                                                             ccAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCtt                                  <  2:360220/150‑1 (MQ=255)                                                                                                             ccAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCtt                                  <  1:1415074/150‑1 (MQ=255)                                                                                                              cAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCGCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCttt                                 <  1:276792/150‑1 (MQ=255)                                                                                                               aaGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAgg                                                          <  2:1173740/124‑1 (MQ=255)                                                                                                               aaGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAgg                                                          >  1:1173740/1‑124 (MQ=255)                                                                                                                      aaGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAAcc                         <  2:803615/150‑1 (MQ=255)                                                                                                                         cTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTc                      <  2:1467240/150‑1 (MQ=255)                                                                                                                           gATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGc                    <  1:545636/150‑1 (MQ=255)                                                                                                                               ttgtagtacctgcaaaggccctTTCGCGGGCGCGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCtgtg                                                                                 <  2:718672‑M1/63‑1 (MQ=255)                                                                                                                               ttgtagtacctgcaaaggccctTTCGCGGGCGCGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCtgtg                                                                                 >  1:718672‑M1/23‑85 (MQ=255)                                                                                                                               ggCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTgg                                                                                >  2:655154/1‑86 (MQ=255)                                                                                                                               ggCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTgg                                                                                <  1:655154/86‑1 (MQ=255)                                                                                                                                    tATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCTCGCGAAAGGGCCTTTGCAGGTACGACAAGCCTTGGATCAACCCTCGCTCCCTCAGc           >  2:514866/1‑150 (MQ=255)                                                                                                                                             ccGGCCCCTTCGCGGGCACGCCCGCTCCCCCAGGTAGCGCGTCGCTCCAGCGCGCAGCCCACACACCCGTGGGAGCGGGCGCGCCCACGAAAGGGCCTTTGCAGGTACCACAAGCCTTTGATCCACCCTCGCCCCCTCAGCCCCCGCAAc  >  2:137602/1‑150 (MQ=255)                                                                                                                                                  cctTTCGCGGGCGCGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTgg                                                                                >  2:671097‑M1/4‑67 (MQ=255)                                                                                                                                                  cctTTCGCGGGCGCGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTgg                                                                                <  1:671097‑M1/64‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                              CACGCCGTGGCAAGCGGGTGAGTATCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAAC  >  NC_002947/5816752‑5817041

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.