New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 530833 = | 48 (0.800) | 3 (0.050) | 3/234 | NT | 5.8% | coding (744/960 nt) | birA | bifunctional biotin‑[acetyl‑CoA‑carboxylase] ligase/biotin operon repressor BirA |
? | NC_002947 | 530860 = | 51 (0.870) | coding (771/960 nt) | birA | bifunctional biotin‑[acetyl‑CoA‑carboxylase] ligase/biotin operon repressor BirA |
CAGGTGAACGAACAGGTCGATCAGCAGTGGACTTCTATGCGGCGTGAGGTTGGTGCAGCCATAGATCGCAATCACTTGGTCGCGCTGCTCAGTCAGCAGCTACAGCACGAATTGGCGCGTCATCGCCGCTACGGCTTTGCCGCATTCCAGGAGGAGTGGGAGCAGGCGCACTTGTGGCAGGGGCGCAATGTATCGCTGGTTGCTGGTAGTACACGTATTGATGGCGTGGTTCTTGGCGTCGACGGGCAGGGTGGTTTGCGCCTTGAGGTGGACGGGATGGAAAAGAGCT > NC_002947/530717‑531005 | cAGGTGAACGAACAGGTCGATCAGCAGTGGACTTCTATGCGGCGTGAGGTTGGTGCAGCCATAGATCGCAATCACTTGGTCGCGCTGCTCAGTCAGCAGCTACAGCACGAATTGGCGCGTCATCGCCGCTACGGCTTTGCCGCATTCCag < 2:20931/150‑1 (MQ=255) cAGGTGAACGAACAGGTCGATCAGCAGTGGACTTCTATGCGGCGTGAGGTTGGTGCAGCCATAGATCGCAATCACTTGGTCGCGCTGCTCAGTCAGCAGCTACAGCACGAATTGGCGCGTCATCGCCGCTACGGCTTTGCCGCATTCCag < 1:966917/150‑1 (MQ=255) aGGTGAACGAACAGGTCGATCAGCAGTGGACTTCTATGCGGCGTGAGGTTGGTGCAGCCATAGATCGCAATCACTTGGTAGCGCTGCTCAGTCAGCAGCTACAGCACGAATTGGCGCGTCATCGCCGCTACGGCTTTGCCGCATTCCagg > 1:1475968/1‑150 (MQ=255) aaccaccctgcccgtcgacgccaagaaccacgccatcaatacgtgtactaccagcaaccagcgatacactgcgcccctgccacaagtgcgcctgctcccactcctcctggaatGCGTCATCGCCGCTACGGCTTTGCCGCATTCCaggag > 1:950581‑M1/114‑150 (MQ=255) acAGGTCGATCAGCAGTGGACTTCTATGCGGCGTGAGGTTGGTGCAGCCATAGATCGCAATCACTTGGTCGCGCTGCTCAGTCAGCAGCTACAGCACGAATTGGCGCGTCATCGCCGCTACGGCTTTGCCGCATTCCAGGAGGAGTGGGa < 2:1105282/150‑1 (MQ=255) gcagGGGACTTCTATGCGGCGTGAGGTTGGTGCAGCCATAGATCGCAATCACTTGGTCGCGCTGCTCAGTCAGCAGCTACAGCACGAATTGGCGCGTCATCGCCGCTACGGCTTTGCCGCATTCCAGGAGGAGTGGGAGCAGGCGCACtt > 2:1229619/1‑150 (MQ=255) gTGGACTTCTATGCGGCGTGAGGTTGGTGCAGCCATAGATCGCAATCACTTGGTCGCGCTGCTCAGTCAGCAGCTACAGCACGAATTGGCGCGTCATCGCCGCTACGGCTTTGCCGCATTCCAGGAGGAGTGGGAGCAGGCGCACTtgtg > 2:948610/1‑150 (MQ=255) cggcgTGAGGTTGGTGCAGCCATAGATCGCAATCACTTGGTAGCGCTGCTCAGTCAGCAGCTACAGCACGAATTGGCGCGTCATCGCCGCTACGGCTTTGCCGCATTCCAGGAGGAGTGGGAGCAGGCGCACTTGTGGCAGGGGCGCAAt < 2:1475968/150‑1 (MQ=255) aatacgtgtactaccagcaaccagcgatacattgcgcccctgccacaagtgcgcctgctcccactcctcctggaatGCGTCATCGCCGCTACGGCTTTGCCGCATTCCagga > 1:594321‑M1/77‑112 (MQ=255) aatacgtgtactaccagcaaccagcgatacattgcgcccctgccacaagtgcgcctgctcccactcctcctggaatGCGTCATCGCCGCCACGGCTTTGCCGCATTCCagga < 2:594321‑M1/36‑1 (MQ=255) gTTGGTGCAGCCATAGATCGCAATCACTTGGTCGCGCTGCTCAGTCAGCAGCTACAGCACGAATTGGCGCGTCATCGCCGCTACGGCTTTGCCGCATTCCAGGAGGAGTGGGAGCAGGCGCACTTGTGGCAGGGGCGCAATGTATCGcgg > 1:980172/1‑148 (MQ=255) tGCAGCCATAGATCGCAAACACTTGGTCGCGCTGCTCAGTCAGCAGCTACAGCACGAATTGGCGCGTCATCGCCGCTACGGCTTTGCCGCATTCCAGGAGTAGTGGGAGCAGGCGCACTTGTGGCAGGGGCGCAATGTATCGCTGGTTGc < 1:252670/150‑1 (MQ=255) cAGCCATAGATCGCAATCACTTGGTCGCGCTGCTCAGTCAGCAGCTACAGCACGAATTGGCGCGTCATCGCCGCTACGGCTTTGCCGCATTCCAGGAGGAGTGGGAGCAGGCGCACTTGTGGCAGGGGCGCAATGTATCGCTGGTTGCTg < 1:1229619/150‑1 (MQ=255) gCCATAGATCGCAATCACTTGGTCGCGCTGCTCAGTCAGCAGCTACAGCACGAATTGGCGCGTCATCGCCGCTCCGGCTTTGCCGCATTCCAGGAGGAGTGGGAGCAGGCGCACTTGTGGCAGGGGCGCAATGTATCGCTGGTTGCTGgt > 1:1267332/1‑150 (MQ=255) aTAGATCGCAATCACTTGGTCGCGCTGCTCAGTCAGCAGCTACAGCACGAATTGGCGCGTCATCGCCGCTACGGCTTTGCCGCATTCCAGGAGGAGTGGGAGCAGGCGCACTTGTGGCAGGGGCGCAATGTATCGCTGGTTGCTGgtagt > 2:847704/1‑150 (MQ=255) aTCGCAATCACTTGGTCGCGCTGCTCAGTCAGCAGCTACAGCACGAATTGGCGCGTCATCGCCGCTACGGCTTTGCCGCATTCCAGGAGGAGTGGGAGCAGGCGCACTCGTGACAAAGGCGCCAGGAATCGCGGGATGGTGGTAGTacac > 2:1173158/1‑150 (MQ=255) aCTTGGTCGCGCTGCTCAGTCAGCAGCTACAGCACGAATTGGCGCGTCATCGCCGCTACGGCTTTGCCGCATTCCagga < 2:232029/79‑1 (MQ=255) aCTTGGTCGCGCTGCTCAGTCAGCAGCTACAGCACGAATTGGCGCGTCATCGCCGCTACGGCTTTGCCGCATTCCagga > 1:232029/1‑79 (MQ=255) aCTTGGTCGCGCTGCTCAGTCAGCAGCTACAGCACGAATTGGCGCGTCATCGCCGCTACGGCTTTGCCGCATTCCAGGAGGAGTGGGAGCAGGCGCACTTGTGGCAGGGGCGCAATGTATCGCTGGTTGCTGGTAGTACACGTATTGATg > 1:682425/1‑150 (MQ=255) ttGGTCGCGCTGCTCAGTCAGCAGCTACAGCACGAATTGGCGCGTCATCGCCGCTACGGCTTTGCCGCATTCCAGGAGGAGTGGGAGCAGGCGCACTTGTGGCAgg > 2:380070/1‑106 (MQ=255) ttGGTCGCGCTGCTCAGTCAGCAGCTACAGCACGAATTGGCGCGTCATCGCCGCTACGGCTTTGCCGCATTCCAGGAGGAGTGGGAGCAGGCGCACTTGTGGCAgg < 1:380070/106‑1 (MQ=255) cgcgCTGCTCAGTCAGCAGCTACAGCACGAATTGGCGCGTCATCGCCGCTACGGCTTTGCCGCATTCCAGGAGGAGTGGGAGCAGGCGCACTTGTGGCAGGGGCGCAATGTATCGCTGGTTGCTGGTAGTACACGTATTGATGGCGTGGt > 1:666051/1‑150 (MQ=255) gctCAGTCAGCAGCTACAGCACGAATTGGCGCGTCATCGCCGCTACGGCTTTGCCGCATTCCAGGAGGAGTGGGAGCAGGCGCACTTGTGGCAGGGGCGCAATGTATCGCTGGTTGCTGGTAGTACACGTATTGATGGCGTGGTTCTTgg < 1:847704/150‑1 (MQ=255) ctCAGTCAGCAGCTACAGCACGAATTGGCGCGTCATCGCCGCTACGGCTTTGCCGCATTCCAGGAGGAGTGGGAGCAGGCGCACTTGTGGCAgggg > 2:1512415/1‑96 (MQ=255) ctCAGTCAGCAGCTACAGCACGAATTGGCGCGTCATCGCCGCTACGGCTTTGCCGCATTCCAGGAGGAGTGGGAGCAGGCGCACTTGTGGCAgggg < 1:1512415/96‑1 (MQ=255) ctCAGTCAGCAGCTACAGCACGAATTGGCGCGTCAGCGCCGCTACGGCTTTGCTGCATTCCAGGAGGAGTGGGAGCAGGCGCACTTGTGGCAGGGGCGCAATGTATCGCTGGTTGCTGGTAGTACACGTATTGATGGCGTGGTTCTTGGc < 2:44079/150‑1 (MQ=255) gtcagCAGCTACAGCACGAATTGGCGCGTCATCGCCGCTACGGCTTTGCCGCATTCCAGGAGGAGTGGGAGCAGGCGCACTTGTGGCAGGGGCGCAATGTATCGCTGGTTGCTGGTAGTACACGTATTGATGGCGTGGTTCTTGGCGTCg > 2:1100528/1‑150 (MQ=255) gcagcTACAGCACGAATTGGCGCGTCATCGCCGCTACGGCTTTGAAGATCTTGGCGCGGAGTCGGAGCAGGCGCACTTGTGGCAGGGGCGCAATGTATCGCTGGGTGCTGGTAGTACACGTATTGATGGCGTGGTTCTTGGCGTCGACgg > 1:850032/1‑150 (MQ=255) cagcTACAGCACGAATTGGCGCGTCATCGCCGCTACGGCTTTGCCGCATTCCAGGAGGAGTGGGAGCAGGCGCACTTGTGGCAGGGGCGCAATGTa < 2:1298055/96‑1 (MQ=255) cagcTACAGCACGAATTGGCGCGTCATCGCCGCTACGGCTTTGCCGCATTCCAGGAGGAGTGGGAGCAGGCGCACTTGTGGCAGGGGCGCAATGTa > 1:1298055/1‑96 (MQ=255) gcTACAGCACGAATTGGCGCGTCATCGCCGCTACGGCTTTGCCGCATTCCAGGAGGAGTGGGAGCAGGCGCACTTGTGGCAGGGGCGCAATGTATCGCTGGTTGCTGGTAGTACACGTATTGATGGCGTGGTTCTTGGCGTCGACGGGCa > 1:552545/1‑150 (MQ=255) cTACAGCACGAATTGGCGCGTCATCGCCGCTACGGCTTTGCCGCATTCCAGGAGGAGTGGGAGCAGGCGCACTTGTGGCAGGGGCGCAATGTATCGCTGGTTGCTGGTAGTACACGTATTGATGGCGTGGTTCTTGGCGTCGACGGGCAg > 1:806412/1‑150 (MQ=255) cTACAGCACGAATTGGCGCGTCATCGCCGCTACGGCTTTGCCGCATTCCAGGAGGAGTGGGAGCAGGCGCACTTGTGGCAGGGGCGCAATGTATCGCTGGTTGCTGGTAGTACACGTATTGATGGCGTGGTTCTTGGCGTCGACGGGCAg > 1:404013/1‑150 (MQ=255) aGCACGAATTGGCGCGTCATCGCCGCTACGGCTTTGCCGCATTCCAGGAGGAGTGGGAGCAGGCGCACTTGTGGCAGGGGCGCAATGTATCGCTGGTTGCTGGTAGTACACGTATTGCTGGCGTGGTTCTTGGCGTCGACGGGCAGggtg > 2:377829/1‑150 (MQ=255) gCACGAATTGGCGCGTCATCGCCGCTACGGCTTTGCCGCATTCCAGGAGGAGTGGGAGCAGGCGCACTTGTGGCAGGGGCGCAATGTATCGCTGGTTGCTGGTAGTACACGTATTGATGGCGTGGTTCTTGGCGTCGACGGGCAGggtgg > 1:438466/1‑150 (MQ=255) cACGAATTGGCGCGTCATCGCCGCTACGGCTTTGCCGCATTCCAGGAGGAGTGGGAGCAGGCGCACTTGTGGCAGGGGCGCAATGTATCGCTGGTTGc > 1:1112057/1‑98 (MQ=255) cACGAATTGGCGCGTCATCGCCGCTACGGCTTTGCCGCATTCCAGGAGGAGTGGGAGCAGGCGCACTTGTGGCAGGGGCGCAATGTATCGCTGGTTGc < 2:1112057/98‑1 (MQ=255) cACGAATTGGCGCGTCATCGCCGCTACGGCTTTGCCGCATTCCAGGAGGAGTGGGAGCAGGCGCACTTGTGGCAGGGGCGCAATGTATCGCTGGTTGCt < 1:1097190/99‑1 (MQ=255) cACGAATTGGCGCGTCATCGCCGCTACGGCTTTGCCGCATTCCAGGAGGAGTGGGAGCAGGCGCACTTGTGGCAGGGGCGCAATGTATCGCTGGTTGCt > 2:1097190/1‑99 (MQ=255) cACGAATTGGCGCGTCATCGCCGCTACGGCTTTGCCGCATTCCAGGAGGAGTGGGAGCAGGCGCACTTGTGGCAGGGGCGCAATGTATCGCTGGTTGCTGGTAGTACACGTATTGATGGCGTGGTTCTTGGCGTCGACGGGCAGggtggt > 1:270502/1‑150 (MQ=255) ctcctggaatgcggcaaagccgtagcggcgatgacgcATTCCAGGAGGAGTGGGAGCAGGCGCACTTGTGGCAGGGGCGCAGTGTATCGCTGGTTGCTGGTAGTACACGTATTGATGGCGTGGTTCTTGGCGTCGACGGGCAGGGTGGtt > 1:950581‑M2/38‑150 (MQ=255) tcctggaatgcggcaaagccgtggcggcgatgacgcATTCCAGGAGGAGTGGGAGCAGGCGCACTTGTGGCAGGGGCGCAATGTATCGCTGGTTGCTGGTAGTACACGTAtt < 2:594321‑M2/76‑1 (MQ=255) tcctggaatgcggcaaagccgtagcggcgatgacgcATTCCAGGAGGAGTGGGAGCAGGCGCACTTGTGGCAGGGGCGCAATGTATCGCTGGTTGCTGGTAGTACACGTAtt > 1:594321‑M2/37‑112 (MQ=255) gAATTGGCGCGTCATCGCCGCTACGGCTTTGCCGCATTCCAGGAGGAGTGGGAGCAGGCGCACTTGTGGCAGGGGCGCAATGTATCGCTGGTTGCTGGTAGTACACGTATTGATGGCGTGGTTCTTGGCGTCGACGGGCAGGGTGGTTTg > 1:587319/1‑150 (MQ=255) gcgcGTCATCGCCGCTACGGCTTTGCCGCATTCCAGGAGGAGTGGGAGCAGGCGCACTTGTGGCAGGGGCGCAATGTATCGCTGGTTGCTGGTAGTACACGTATTGATGGCGTGGTTCTTGGCGTCGACGGGCAGGGTGGTTTGCGCCtt < 1:948610/150‑1 (MQ=255) GCGTCATCGCCGCTACGGCTTTGCCGCATTCCAGGAGGAGTGGGAGCAGGCGCACTTGTGGCAGGGgc < 1:764671‑M1/68‑1 (MQ=255) GCGTCATCGCCGCTACGGCTTTGCCGCATTCCAGGAGGAGTGGGAGCAGGCGCACTTGTGGCAGGGgc > 2:764671‑M1/1‑68 (MQ=255) GCGTCATCGCCGCTACGGCTTTGCCGCATTCCAGGAGGAGTGGGAGCAGGCGCACTTGTGGCAGGGGCGCAATGTATCGCTGGTTGCTGGTAGTACACGTATTGATGGAGGCCGTCTTGGCGTCGACGGGCAGGGTGGTTTGCGCCTTGa < 1:499547‑M1/150‑1 (MQ=255) CGTCATCGCCGCTACGGCTTTGCCGCATTCCCGGCGGAGAGGGCGCAGGCGCACTTGTGGCAGGGGCGCAATGTATCGCTGGTTGCTGGTAGTACACGTATTGATGGCGTGGTTCTTGGCGTCGACGGGCAGGGTGGTTTGCGCCTTGAg > 2:499547‑M1/1‑150 (MQ=255) CGTCATCGCCGCTACGGCTTTGCCGCATTCCAGGAGGAGTGGGAGCAGGCGCACTTGTGGCAGGGGCGCAATGTATCGCTGGTTGCTGGTAGTACACGTATTGATGGCGTGGTTCTTGGCGTCGACGGGCAGGGTGGTTTGCGCCTTGAg > 2:850032‑M1/1‑150 (MQ=255) tCATCGCCGCTACGGCTTTGCCGCATTCCAGGAGGAGTGGGAGCAGGCGCACTTGTGGCAGGGGCGCAATGTATCGCTGGTTGCTGGTAGTACACGTATTGATGGCGTGGTTCTTGGCGTCGACGGGCAGGGTGGTTTGCGCCTTGAggg > 1:145541/1‑149 (MQ=255) ccgcTACGGCTTTGCCGCATTCCAGGAGGAGTGGGAGCAGGCGCACTTGTGGCAGGGGCGCAATGTATCGCTGGTTGCTGGTAGTACACGTATTGATGGCGTGGTTCTTGGCGTCGACGGGCAGGGTGGTTTGCGCCTTGAGGTGGACgg > 1:558657/1‑150 (MQ=255) ccgcTACGGCTTTGCCGCATTCCAGGAGGAGTGGGAGCAGGCGCACTTGTGGCAGGGGCGCAATGTATCGCTGGTTGCTGGTAGTACACGTATTGATGGCGTGGTTCTTGGCGTCGACGGGCAGGGTGGTTTGCGCCTTGAGGTGGACgg < 2:404013/150‑1 (MQ=255) ccgcTACGGCTTTGCCGCATTCCAGGAGGAGTGGGAGCAGGCGCACTTGTGGCAGGGGCGCAATGTATCGCTGGTTGCTGGTAGTACACGTATTGATGGCGTGGGTCTTGGCGTCGACGGGCAGGGTGGTTTGCGCCTTGAGGTGGACgg > 1:557241/1‑150 (MQ=255) gcTACGGCTTTGCCGCATTCCAGGAGGAGTGGGAGCAGGCGCACTTGTGGCAGGGGCGCAATGTATCGCTGGTTGCTGGTAGTACACGTATTGATGGCGTGGTTCTTGGCGTCGACGGGCAGGGTGGTTTGCGCCTTGAGGTGGACGGGa < 1:1363782/150‑1 (MQ=255) cTACGGCTTTGCCGCATTCCAGGAGGAGTGGGAGCAGGCGCACTTGTGGCAGGGGCGCAATGTATCGCTGGTTGc > 2:1497095/1‑75 (MQ=255) cTACGGCTTTGCCGCATTCCAGGAGGAGTGGGAGCAGGCGCACTTGTGGCAGGGGCGCAATGTATCGCTGGTTGc < 1:1497095/75‑1 (MQ=255) cGGCTTTGCCGCATTCCAGGAGGAGTGGGAGCAGGCGCACTTGTGGCAGGGGCGCAATGTATCGCTGGTTGCTGGTAGTACACGTATTGATGGCGTGGTTCTTGGCGTCGACGGGCAGGGTGGTTTGCGCCTTGAGGTGGACGGGATGGa > 1:983619/1‑150 (MQ=255) ggCTTTGCCGCATTCCAGGAGGAGTGGGAGCAGGCGCACTTGTGGCAGGGGCGCAATGTATCGCTGGTTGCTGGTAGTACACGTATTGATGGCGTGGTTCTTgg > 1:390909/1‑104 (MQ=255) ggCTTTGCCGCATTCCAGGAGGAGTGGGAGCAGGCGCACTTGTGGCAGGGGCGCAATGTATCGCTGGTTGCTGGTAGTACACGTATTGATGGCGTGGTTCTTgg < 2:390909/104‑1 (MQ=255) cTTTGCCGCATTCCAGGAGGAGTGGGAGCAGGCGCACTTGTGGCAGGGGCGCAATGTATCGCTGGTTGCTGGTAGTACACGTATTGATGGCGTGGTTCTTGGCGTCGACGGGCAGGGTGGTTTGCGCCTTGAGGTGGACGGGATGGaaaa < 2:587319/150‑1 (MQ=255) cTTTGCCGCATTCCAGGAGGAGTGGGAGCAGGCGCACTTGTGGCAGGGGCGCAATGTATCGCTGGTTGCTGGTAGTACACGTATTGATGGCGTGGTTCTTGGCGTCGACGGGCAGGGTGGTTTGCGCCTTGAGGTGGACGGGATGGaaaa < 1:1173158/150‑1 (MQ=255) gtGCCGCATTCCAGGAGGAGTGGGAGCCGGCGCTCCTGTGGCAGGGGCGCAATGTATCGCTGGTTGCTGGTAGTCCACGTATTGATGGCGTGGTTCTTGGCGTAGACGGGCAGGGTGGTTTGCGCCTTGTGGTGGACGGGATGGAAAaga < 2:557241/149‑1 (MQ=255) ccGCATTCCAGGAGGAGTGGGAGCAGGCGCACTTGTGGCAGGGGCGCAATGTATCGCTGGTTGCTGGTAGTACACGTATTGATGGCGTGGTTCTTGGCGTCGACGGGCAGGGTGGTTTGCGCCTTGAGGTGGACGGGATGGAAAAGAGCt > 2:104233/1‑150 (MQ=255) | CAGGTGAACGAACAGGTCGATCAGCAGTGGACTTCTATGCGGCGTGAGGTTGGTGCAGCCATAGATCGCAATCACTTGGTCGCGCTGCTCAGTCAGCAGCTACAGCACGAATTGGCGCGTCATCGCCGCTACGGCTTTGCCGCATTCCAGGAGGAGTGGGAGCAGGCGCACTTGTGGCAGGGGCGCAATGTATCGCTGGTTGCTGGTAGTACACGTATTGATGGCGTGGTTCTTGGCGTCGACGGGCAGGGTGGTTTGCGCCTTGAGGTGGACGGGATGGAAAAGAGCT > NC_002947/530717‑531005 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |