New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 634174	44 (0.730)	6 (0.110)	6/218	NT	11.9%	coding (477/2016 nt)	PP_0546	sigma‑54 dependent transcriptional regulator
	?	NC_002947	= 634185	49 (0.900)					coding (488/2016 nt)	PP_0546	sigma‑54 dependent transcriptional regulator

CGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCTGACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTCCTCTGCGCGCCCCGACGTATCGCGGCAAAGCCAGTTCCACACCATGGCGTTGGTCAACCTGTCGGCGAAGATGATCGAAAGCTGCTATTTCCTGCG  >  NC_002947/634036‑634332                                                                                                                                                      |                                                                                                                                                    cGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCTGACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGc                                                                                                                                                     <  2:1385506/150‑1 (MQ=255)         ccGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCTGACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCcagcccgg                                                                                                                                             >  1:907685‑M2/1‑142 (MQ=255)          cGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCTGATGTCTGGTCGAGCGCCAGGCGCTGACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCcagcccggt                                                                                                                                            >  2:1176315‑M2/1‑141 (MQ=255)          cGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCTGACCTTCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCGGCGCGTCcagcccggt                                                                                                                                            >  2:645165‑M2/1‑141 (MQ=255)          cGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCTGACCATCCATCAGAACGAGCACTTCCCTGGCTGTCACACCGGGCTGACCTTCTCGGCcagcccggt                                                                                                                                            >  2:401983‑M2/1‑141 (MQ=255)                            tGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCTGACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTc                                                                                                                                        >  1:1373975/1‑136 (MQ=255)                            tGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCTGACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTc                                                                                                                                        <  2:1373975/136‑1 (MQ=255)                                   aGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCTGACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACctgctg                                                                                                                   >  1:625862/1‑150 (MQ=255)                                    gCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCTGACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTgg                                                                                                                  <  1:1405948/150‑1 (MQ=255)                                      gAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCTGACCATCCATCAGAACGAGCCCTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACTCGCATGGCAACCTCATGGCg                                                                                                                >  2:421158/1‑150 (MQ=255)                                        ggCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCTGACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGt                                                                                                              <  2:1355385/150‑1 (MQ=255)                                            cgcgAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCTGACCATCCATCAGAACGAGCACTTCCGTGGCAGTCACACCGGGCTGCCGTGCTCGGCCAGCGCGTTGGTCGACGCGCATGGCGACCTGCTGGCGGTGCTc                                                                                                          <  2:598596/150‑1 (MQ=255)                                              cgAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCTGACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGa                                                                                                        <  2:459728/150‑1 (MQ=255)                                                   gCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCTGACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACgtgt                                                                                                   <  1:150924/150‑1 (MQ=255)                                                       cAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCTGACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTCctc                                                                                               >  1:1378001/1‑150 (MQ=255)                                                                   cacaTGTCTGGTCGAGCGCCAGGCGCTGACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACctgc                                                                                                                     >  2:782712/1‑116 (MQ=255)                                                                   cacaTGTCTGGTCGAGCGCCAGGCGCTGACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACctgc                                                                                                                     <  1:782712/116‑1 (MQ=255)                                                                      aTGTCTGGTCGAGCGCCAGGCGCTGACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTCCTCTGCGCGCCCCGACGt                                                                                <  2:1566056/150‑1 (MQ=255)                                                                        gTCTGGTCGAGCGCCAGGCGCTGACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGAc                                                                                                                         >  2:984577/1‑107 (MQ=255)                                                                        gTCTGGTCGAGCGCCAGGCGCTGACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGAc                                                                                                                         <  1:984577/107‑1 (MQ=255)                                                                        gTCTGGTCGAGCGCCAGGCGCTGACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTCCTCTGCGCGCCCCGACGTAt                                                                              >  1:255159/1‑150 (MQ=255)                                                                        gTCTGGTCGAGCGCCAGGCGCTGACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTCCTCTGCGCGCCCCGACGTAt                                                                              <  2:626640/150‑1 (MQ=255)                                                                         tCTGGTCGAGCGCCAGGCGCTGACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCTGTGCTCGACGTGTCCTCTGCGCGCCCCGACGTATc                                                                             >  1:85597/1‑150 (MQ=255)                                                                         tCTGGTCGAGCGCCAGGCGCTGACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTCCTCTGCGCGCCCCGACGTATc                                                                             <  2:255159/150‑1 (MQ=255)                                                                         tCTGGTCGAGCGCCAGGCGCTGACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTCCTCTGCGCGCCCCGACGTATc                                                                             >  2:597961/1‑150 (MQ=255)                                                                                 aGCGCCAGGCGCTGACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTCCTCTGCGCGCCCCGACGTATCGCGGCaaa                                                                     <  2:85597/150‑1 (MQ=255)                                                                                    gcCAGGCGCTGACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTCCTCTGCGCGCCCCGACGTATCGCGGCAAAGcc                                                                  >  2:17030/1‑150 (MQ=255)                                                                                      cAGGCGCTGACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTCCTCTGCGCGCCCCGACGTATCGCGGCAAAGCCAg                                                                >  2:1294082/1‑150 (MQ=255)                                                                                                  atccatcAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTCCTCTGCGCGCCCCGACGTATCGCGGCAAAGCCAGTTCCACACCATg                                                    <  1:597961/150‑1 (MQ=255)                                                                                                  atccatcAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTCCTCTGCGCGCCCCGACGTATCGCGGCAAAGCCAGTTCCACACCATg                                                    >  1:1245547/1‑150 (MQ=255)                                                                                                    ccatcAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTCCTCTGCGCGCCCCGACGTATCGCGGCAAAGCCAGTTCCACACCATGGc                                                  >  1:1166634/1‑150 (MQ=255)                                                                                                      atcAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTCCTCTGCGCGCCCCGACGTATCGCGGCAAAGCCAGTTCCACACCATGGCGt                                                >  2:776794/1‑150 (MQ=255)                                                                                                      atcAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTCCTCTGCGCGCCCCGACGTATCGCGGCAAAGCCAGTTCCACACCATGGCGt                                                >  1:1088305/1‑150 (MQ=255)                                                                                                      atcAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTCCTCTGCGCGCCCCGACGTATCGCGGCAAAGCCAGTTCCACACCATGGCGt                                                >  2:1236145/1‑150 (MQ=255)                                                                                                      atcAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTCCTCTGCGCGCCCCGACGTATCGCGGCAAAGCCAGTTCCACACCATGGCGt                                                <  2:1166634/150‑1 (MQ=255)                                                                                                       tcAGAACGAGCACTGGCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTCCTCTGCGCGCCCCGACGTATCGCGGCAAAGCCAGTTCCACACCATGGCGtt                                               <  2:70027/150‑1 (MQ=255)                                                                                                         aGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTCCTCTGCGCGCCCCGACGTATCGAGGCAAAGCCAGTTCCACACCATGGCGTTgg                                             >  1:1292992/1‑150 (MQ=255)                                                                                                           aaCGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTCCTCTGCGCGCCCCGACGTATCGCGGCAAAGCCAGTTCCCCACCATGGCGt                                                <  2:313608/145‑1 (MQ=255)                                                                                                           aaCGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTCCTCTGCGCGCCCCGACGTATCGCGGCAAAGCCAGTTCCCCACCATGGCGt                                                >  1:313608/1‑145 (MQ=255)                                                                                                              gAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTCCTCTGCGCGCCCCGACGTATGGCGGCAAAGCCAGTTCCACACCATGGCGTTGGTCAAc                                        >  1:1321224/1‑150 (MQ=255)                                                                                                                gCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTCCTCTGCGCGCCCCGACGTATCGCGGCAAAGCCAGTTCCACACCATGGCGTTGGTCAACCt                                      >  1:818460/1‑150 (MQ=255)                                                                                                                  aCTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTCCTCTGCGCGCCCCGACGTATCGCGGCAAAGCCAGTTCCACACCATGGCGTTGGTCAACCTGt                                    >  2:27179/1‑150 (MQ=255)                                                                                                                    ttCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTCCTCTGCGCGCCCCGACGTATCGCGGCAAAGCCAGTTCCACACCATGGCGTTGGTCAACCTGTCg                                  >  2:412486/1‑150 (MQ=255)                                                                                                                      ccGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTCCTCTGCGCGCCCCGACGTATCGCGGCAAAGCCAGTTCCACACCATGGCGTTGGTCAACCTGTCGGc                                <  1:1314061/150‑1 (MQ=255)                                                                                                                                 acacCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTgg                                                                                                                  >  1:775556/1‑57 (MQ=255)                                                                                                                                 acacCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTgg                                                                                                                  <  2:775556/57‑1 (MQ=255)                                                                                                                                  cacCGGGCTGACCTGCTCGGCcagcccggtgtgacggccacggaagtgctcgttctgatggatggtcagcgcctg                                                                                               <  1:1222810‑M2/75‑55 (MQ=255)                                                                                                                                  cacCGGGCTGACCTGCTCGGCcagcccggtgtgacggccacggaagtgctcgttctgatggatggtcagcgcctg                                                                                               >  2:1222810‑M2/1‑21 (MQ=255)                                                                                                                                   acCGGGCTGACCTGCTCGGCcagcccggtgtgacggccacggaagtgctcgttctgatggatggtcagcgcctggcgctc                                                                                         <  1:593273‑M2/80‑61 (MQ=255)                                                                                                                                   acCGGGCTGACCTGCTCGGCcagcccggtgtgacggccacggaagtgctcgttctgatggatggtcagcgcctggcgctc                                                                                         >  2:593273‑M2/1‑20 (MQ=255)                                                                                                                                    ccGGGCTGACCTGCTCGGCcagcccggtgtgacggccacggaagtgctcgttctgatggatggtcagcgcctggcgctcgaccagacatgtgccgatgccattggtgccctcgcgcgcctcgctccagtcagcgcccagccacagcccgg                  <  1:978178‑M2/150‑132 (MQ=255)                                                                                                                                     cGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTCCTCTGCGCGCCCCGACGTATCGCGGCAAAGCCAGTTCCACACCATGGCGTTGGTCAACCTGTCGGCGAAGATGATc                      >  2:154946/1‑145 (MQ=255)                                                                                                                                     cGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTCCTCTGCGCGCCCCGACGTATCGCGGCAAAGCCAGTTCCACACCATGGCGTTGGTCAACCTGTCGGCGAAGATGATc                      <  1:154946/145‑1 (MQ=255)                                                                                                                                        gCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCTACCTGCTGGCGGTGTTTCACGTGTCCTCTGCGCGCCCCGACGTATCGCGGCAAAGCCAGTTCCACACCATGGCGTTGGTCAACCTGTCGGCGAAGATGATCGAAAgctg              <  1:17030/150‑1 (MQ=255)                                                                                                                                          tGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTCCTCTGCGCGCCCCGACGTATCGCGGCAAAGCCAGTTCCACACCATGGCGTTGGTCAACCTGTCGGCGAAGATGATCGAAAgctgct            >  2:226150/1‑150 (MQ=255)                                                                                                                                           gACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTCctct                                                                                              <  1:1197722/67‑1 (MQ=255)                                                                                                                                           gACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTCctct                                                                                              >  2:1197722/1‑67 (MQ=255)                                                                                                                                            aCCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTCCTCTGCGCGCCCCGACGTATCGCGGCAAAGCCAGTTCCACACCATGGCGTTGGTCAACCTGTCGGCGAAGATGATCg                     <  2:1018178/139‑1 (MQ=255)                                                                                                                                            aCCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTCCTCTGCGCGCCCCGACGTATCGCGGCAAAGCCAGTTCCACACCATGGCGTTGGTCAACCTGTCGGCGAAGATGATCGAAAGCTGCTAt          >  1:253605/1‑150 (MQ=255)                                                                                                                                            aCCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTCCTCTGCGCGCCACGACGTATCGCGGCAAAGCCAGTTCCACACCATGGCGTTGGTCAACCTGTCGGCGAAGATGATCg                     >  1:1018178/1‑139 (MQ=255)                                                                                                                                               tGCTCGGCCAGCCCGGTGTTCGACCCGCATTGCGACCTGCTGGCGGTGCTCGACGTGTCCTCTGCGCGCCCCGACGTATCGCGGCAAAGCCAGTTCCACACCATGGCGTTGGTCAACCTGTCGGCGAAGATGATCGAAAGCTGCTATTTc       <  1:1236145/150‑1 (MQ=255)                                                                                                                                                gCTCGGCcagcccggtgtgacggccacggaagtgctcgttctgatggatggtcagcgcctggcgctcgaccagacatgtgccgatgccattggtgccctcgcgcgcctcgctccagtcagcgcccagccacagcccggcacgctcgaagc      <  1:1347713‑M2/150‑144 (MQ=255)                                                                                                                                                  tCGGCcagcccggtgtgacggccacggaagtgctcgttctgatggatggtcagcgcctggcgctcgaccagacatgtgccgatgccattggtgccctcgcgcgcctcgctccagtcagcgcccagccacagcccggcacgctcgaagctg    >  2:978178‑M2/1‑5 (MQ=255)                                                                                                                                                   cGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTCCTCTGCGCGCCCCGACGTATCGCGGCAAAGCCAGTTCCACACCATGGCGTTGGTCAACCTGTCGGCGAAGATGATCGAAAGCTGCTATTTCCTgc   <  1:27179/150‑1 (MQ=255)                                                                                                                                                    ggCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTCCTCTGCGCGCCCCGACGTATCGCGGCAAAGCCAGTTCCACACCATGGCGTTGGTCAACCTGTCGGCGAAGATGATCGAAAg                 <  1:189100/135‑1 (MQ=255)                                                                                                                                                    ggCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTCCTCTGCGCGCCCCGACGTATCGCGGCAAAGCCAGTTCCACACCATGGCGTTGGTCAACCTGTCGGCGAAGATGATCGAAAg                 >  2:189100/1‑135 (MQ=255)                                                                                                                                                    ggCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTCCTCTGCGCGCCCCGACGTATCGCGGCAAAGCCAGTTCCACACCATGGCGTTGGTCAACCTGTCGGCGAAGATGATCGAAAGCTGCTATTTCCTgcg  >  1:680336/1‑150 (MQ=255)                                                                                                                                                      |                                                                                                                                                    CGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCTGACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTCCTCTGCGCGCCCCGACGTATCGCGGCAAAGCCAGTTCCACACCATGGCGTTGGTCAACCTGTCGGCGAAGATGATCGAAAGCTGCTATTTCCTGCG  >  NC_002947/634036‑634332

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.