New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1196277	61 (1.020)	5 (0.090)	5/232	NT	7.7%	coding (332/1755 nt)	xcpQ	type II secretion pathway protein XcpQ
	?	NC_002947	= 1196306	61 (1.050)					coding (361/1755 nt)	xcpQ	type II secretion pathway protein XcpQ

CCGTCGACCTGCACGACGCCGACGCCATCTACGACATCTTCCTGGCCCAACTGCGCGCCCAGGGCTATGCCACCGTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCCGCGCGCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTATTCAGCGTGCGCAACGCCGCCAGCGAACAGGTACTGGGCATCCTCAAACCGCTGATCGACCCGCGAGTTGGGGTTATTACACCGTACCCGGCGGCGCACCAG  >  NC_002947/1196157‑1196452                                                                                                                                                      |                                                                                                                                                   ccGTCGACCTGCACGACGCCGACGCCATCTACGACATCTTCCTGGCCCAACTGCGCGCCCAGGGCTATGCCACCGTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCCGCGCGCCTGGAGCCGGTGCCAGTGGAggcgg                                                                                                                                                    <  2:1245621/150‑1 (MQ=255)  cGTCGACCTGCACGACGCCGACGCCATCTACGACATCTTCCTGGCCCAACTGCGCGCCCAGGGCTATGCCACCGTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCCGCGCGCCTGGAGCCGGTGCCAGTGGAGGCGGg                                                                                                                                                   <  1:1490601‑M2/150‑2 (MQ=255)     cGACCTGCACGACGCCGACGCCATCTACGACATCTTCCTGGCCCAACTGCGCGCCCAGGGCTATGCCACCGTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCCGCGCGCCTGGAGCCGGTGCCAGTGGAGGCGGgcgg                                                                                                                                                >  1:382857‑M2/1‑146 (MQ=255)       aCCTGCACGACGCCGACGCCATCTACGACATCTTCCTGGCCCAACTGCGCGCCCAGGGCTATGCCACCGTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCCGCGCGCCTGGAGCCGGTGCCAGTGGAGGCgggcgggc                                                                                                                                              >  1:1122057/1‑150 (MQ=255)         cTGCACGACACCGACGCCATCTACGACATCTTCCTGGCCCAACTGCGCGCCCAGGGCTATGCCACCGTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCCGCGCGCCTGGAGCCGGTGCCAGTGGAGGCGGgcggtcag                                                                                                                                            >  2:359442‑M2/1‑142 (MQ=255)             acgacgCCGACGCCATCTACGACATCTTCCTGGCCCAACTGCGCGCCCAGGGCTATGCCACCGTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCCGCGCGCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAgg                                                                                                                                        <  1:54925/150‑1 (MQ=255)                 cgccgacgccATCTACGACATCTTCCTGGCCCAACTGCGCGCCCAGGGCTATGCCACCGTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCCGCGCGCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGa                                                                                                                                    <  2:1632910/150‑1 (MQ=255)                  tccgacgccATCTACGACATCTTCCTGGCCCAACTGCGCGCCCAGGGCTATGCCACCGTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCCGCGCGCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAg                                                                                                                                   <  1:44649/149‑1 (MQ=255)                  gccgacgccATCTCCGACATCTTCCTGGCCCAACTGCGCGCCCAGGGCTATGCCACCGTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCCGCGCGCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAg                                                                                                                                   <  1:299958/150‑1 (MQ=255)                  gccgacgccATCTACGACATCTTCCTGGCCCAACTGCGCGCCCAGGGCTATGCCACCGTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCCGCGCGCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAg                                                                                                                                   <  1:1065347/150‑1 (MQ=255)                  gccgacgccATCTACGACATCTTCCTGGCCCAACTGCGCGCCCAGGGCTATGCCACCGTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCCGCGCGCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAg                                                                                                                                   <  2:167853/150‑1 (MQ=255)                        gccATCTACGACATCTTCCTGGCCCAACTGCGCGCCCAGGGCTATGCCACCGTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCCGCGCGCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGc                                                                                                                             <  1:1083839/150‑1 (MQ=255)                          cATCTACGACATCTTCCTGGCCCAACTGCGCGCCCAGGGCTATGCCACCGTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCCGCGCGCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGa                                                                                                                           >  1:353281/1‑150 (MQ=255)                                cGACATCTTCCTGGCCCAACTGCGCGCCCAGGGCTATGCCACCGTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCCGCGCGCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGt                                                                                                                     >  2:1147582/1‑150 (MQ=255)                                 gACATCTTCCTGGCCCAACTGCGCGCCCAGGGCTATGCCACCGTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCCGCGCGCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTg                                                                                                                    <  2:1255373/150‑1 (MQ=255)                                 gACATCTTCCTGGCCCAACTGCGCGCCCAGGGCTACGCCACCGTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCCGCGCGCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTg                                                                                                                    <  2:876643/150‑1 (MQ=255)                                     tCTTCCTGGCCCAACTGCGCGCCCAGGGCTATGCCACCGTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCCGCGCGCCTGGAGCCGGTGCCAGTGGGGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCa                                                                                                                >  1:1245195/1‑150 (MQ=255)                                     tCTTCCTGGCCCAACTGCGCGCCCAGGGCTATGCCACCGTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCCGCGCGCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCa                                                                                                                >  2:1353433/1‑150 (MQ=255)                                      cTTCCTGGCCCAACTGCGCGCCCAGGGCTATGCCACCGTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCCGCGCGCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCAc                                                                                                               >  2:346593/1‑150 (MQ=255)                                           tGGCCCAACTGCGCGCCCAGGGCTATGCCACCGTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCCGCGCGCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGgcagca                                                                                                                                          <  2:1072779/118‑1 (MQ=255)                                           tGGCCCAACTGCGCGCCCAGGGCTATGCCACCGTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCCGCGCGCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGgcagca                                                                                                                                          >  1:1072779/1‑118 (MQ=255)                                               ccAACTGCGCGCCCAGGGCTATGCCACCGTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCCGCGCGCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTAtt                                                                                                      >  1:1335850/1‑150 (MQ=255)                                               ccAACTGCGCGCCCAGGGCTATGCCACCGTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCCGCGCGCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTAtt                                                                                                      <  1:967809/150‑1 (MQ=255)                                               ccAACTGCGCGCCCAGGGCTATGCCACCGTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCCGCGCGCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTAtt                                                                                                      >  2:1531127/1‑150 (MQ=255)                                                cAACTGCGCGCCCAGGGCTATGCCACCGTCGACCTGCCCAACGGCAGCGTGAAAATCCTGCCCGACCCGCTCGCGGTCCCGGAGCTGGTGCCAGTGGAGGCGCGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTATTc                                                                                                     <  2:220869/150‑1 (MQ=255)                                                     gcgcgcCCAGGGCTATGCCACCGTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCCGCGCGCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTATTCAGCGt                                                                                                <  2:1335850/150‑1 (MQ=255)                                                               ggCTATGCCACCGTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCCGCGCGCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTATTCAGCGTGCGCAAcgcc                                                                                      >  1:651107/1‑150 (MQ=255)                                                                      ccACCGTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCCGCGCGCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTATTCAGCGTGCGCAACGCCGCCAGCg                                                                               >  2:467683/1‑150 (MQ=255)                                                                       cACCGTCGACCTGCCCAACGGCAGCGTGAAAATAGTGACAGACAAGGCTGGGCGACTTGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTATTCAGCGTGCGCAACGCCGCCAGCGa                                                                              >  2:1462943/1‑150 (MQ=255)                                                                        aCCGTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCCGCGCGCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTAtt                                                                                                      <  2:780876/125‑1 (MQ=255)                                                                        aCCGTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCCGCGCGCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTAtt                                                                                                      >  1:780876/1‑125 (MQ=255)                                                                           gTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCCGCGCGCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTATTCAGc                                                                                                  >  2:1047246/1‑126 (MQ=255)                                                                           gTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCCGCGCGCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTATTCAGc                                                                                                  <  1:1047246/126‑1 (MQ=255)                                                                           gTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCCGCGCGCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTATTCAGCGTGCGCAACGCCGCCAGCGAACAg                                                                          <  1:346593/150‑1 (MQ=255)                                                                                 cTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCCGCGCGCCTGGAGCCGGTGCCAGTGGAGACGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTATTCAGCGTGCGCAACGCCGCCAGCGAACAGGTACTg                                                                    <  2:773788/150‑1 (MQ=255)                                                                                     ccAACGGCAGCGTGAAAATCGTGCCCGACCAGGCCGCGCGCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTg                                                                                                                    <  2:1505905/98‑1 (MQ=255)                                                                                     ccAACGGCAGCGTGAAAATCGTGCCCGACCAGGCCGCGCGCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTg                                                                                                                    >  1:1505905/1‑98 (MQ=255)                                                                                      cAACGGCAGCGTGAAAATCGTGCCCGACCAGGCCGCGCGCCTGGAGCCGGTGCCAGTGGAGGCGGGGGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTATTCAGCGTGCGCAACGCCGCCAGCGAACAGGTACTGGGCAt                                                               >  1:1406670/1‑150 (MQ=255)                                                                                           gCAGCGTGAAAATCGTGCCCGACCAGGCCACGCGCCTGTAGCAGGTTCCAGTGGAGGCGGACGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTATTCAGCGTGCGCAACGCCGCCAGCGAACAGGTACTGGGCATCCTCa                                                          >  1:1133278/1‑150 (MQ=255)                                                                                                    aaaTCGTGCCCGACCAGGCCGCGCGCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTATTCAGCGTGCGCAACGCCGCCAGCGAACAGGTACTGGGCATCCTCATGGCGCTGa                                                 <  2:359809/150‑1 (MQ=255)                                                                                                             ccGACCAGGCCGCGCGCCTGGAGCCGGTGCCAGTGGAGGCGGgcggcctggtcgggcacgattttcacgctgccgttgggcaggtcgacggtggcatagccctgggcgcgcagttgggccaggcagatgtcgtagatggcgtcggcgtcg                                        <  1:1390819‑M2/150‑109 (MQ=255)                                                                                                             ccGACCAGGCCGCGCGCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCa                                                                                                                               >  2:451356/1‑63 (MQ=255)                                                                                                             ccGACCAGGCCGCGCGCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCa                                                                                                                               <  1:451356/63‑1 (MQ=255)                                                                                                              cGACCAGGCCGCGCGCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCa                                                                                                                               <  1:1084770/62‑1 (MQ=255)                                                                                                              cGACCAGGCCGCGCGCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCa                                                                                                                               >  2:1084770/1‑62 (MQ=255)                                                                                                              cGACCAGGCCGCGCGCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTATTCAGCGTGCGCAACGCCGCCAGCGAACAGGTACTgg                                                                   <  2:206075/122‑1 (MQ=255)                                                                                                              cGACCAGGCCGCGCGCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTATTCAGCGTGCGCAACGCCGCCAGCGAACAGGTACTgg                                                                   >  1:206075/1‑122 (MQ=255)                                                                                                                 ccAGGCCGCGCGCCTGGAGCCGGTGCCAGTGGAGGCGGgcggcctggtcgggcacgattttcacgctgccgttgggcaggtcgacggtg                                                                                                 <  1:462350‑M2/89‑52 (MQ=255)                                                                                                                 ccAGGCCGCGCGCCTGGAGCCGGTGCCAGTGGAGGCGGgcggcctggtcgggcacgattttcacgctgccgttgggcaggtcgacggtg                                                                                                 >  2:462350‑M2/1‑38 (MQ=255)                                                                                                                   aGGCCGCGCGCCTGGAGCCGGTGCCAGTGGAGGCGGgcggcctggtcgggcacgattttcacgctgccgttgggcaggtcgacggtggcatagccctgggcgcgcagttgggccaggaagatgtcg                                                          >  2:1408483‑M2/1‑36 (MQ=255)                                                                                                                   aGGCCGCGCGCCTGGAGCCGGTGCCAGTGGAGGCGGgcggcctggtcgggcacgattttcacgctgccgttgggcaggtcgacggtggcatagccctgggcgcgcagttgggccaggaagatgtcg                                                          <  1:1408483‑M2/126‑91 (MQ=255)                                                                                                                   aGGCCGCGCGCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTATTCAGCGTGCGCAACGCCGCCAGCGAACAGGTACTGGGCATCCTCAAACCGCTGATCGACCCGCGAGTTg                                  >  1:1388088/1‑150 (MQ=255)                                                                                                                    ggCCGCGCGCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTATTCAGCGTGCGCAACGCCGCCAGCGAACAGGTACTGGGCATCCTCAAACCGCTGATCGACCCGCGAGTTgg                                 >  2:495398/1‑150 (MQ=255)                                                                                                                     gCCGCGCGCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTATTCAGCGTGCGCAACGCCGCCAGCGAACAg                                                                          <  1:478171/108‑1 (MQ=255)                                                                                                                     gCCGCGCGCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTATTCAGCGTGCGCAACGCCGCCAGCGAACAg                                                                          >  2:478171/1‑108 (MQ=255)                                                                                                                     gCCGCGCGCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTATTCAGCGTGCGCAACGCCGCCAGCGAACAGGTACTGGGCATCCTCAAACCGCTGATCGACCCGCGAGTTggg                                <  2:864943/150‑1 (MQ=255)                                                                                                                     gCCGCGCGCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTATTCAGCGTGCGCAACGCCGCCAGCGAACAGGTACTGGGCATCCTCAAACCGCTGATCGACCCGCGAGTTg                                  <  2:473507/148‑1 (MQ=255)                                                                                                                     gCCGCGCGCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTATTCAGCGTGCGCAACGCCGCCAGCGAACAGGTACTGGGCATCCTCAAACCGCTGATCGACCCGCGAGTTg                                  >  1:473507/1‑148 (MQ=255)                                                                                                                       cgcgcgCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTATTCAGCGTGCGCAACGCCGCCAGCGAACAGGTACTGGGCATCCTCAAACCGCTGATCGACCCGCGAGTTGGGGt                              >  1:731055/1‑150 (MQ=255)                                                                                                                          gcgcCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTATTCAGCGTGCGCAACGCCGCCAGCGAACAGGTACTGGGCATCCTCAAACCGCTGATCGACCCGCGAGTTgg                                 <  2:214765/144‑1 (MQ=255)                                                                                                                          gcgcCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTATTCAGCGTGCGCAACGCCGCCAGCGAACAGGTACTGGGCATCCTCAAACCGCTGATCGACCCGCGAGTTgg                                 >  1:214765/1‑144 (MQ=255)                                                                                                                            gcCTGGAGGCGGTGCCAGTCCCGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTATTCATCGTGCGCAACTCCTCCAGCGAACAGGTACTGGGCATCCTCAAACCGCTGATCGACCCGCGAGTTGGGGttatta                         <  1:1318784/150‑1 (MQ=255)                                                                                                                            gcCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTATTCAGCGTGCGCAACGCCGCCAGCGAACAGGTACTGGGCATCCTCAAACCGCTGATCGACCCGCGAGTTGGGGttatta                         <  2:209802/150‑1 (MQ=255)                                                                                                                                 gAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTATTCAGCGTGCGCAACGCCGCCAGCGAACAg                                                                          <  1:1169754/96‑1 (MQ=255)                                                                                                                                 gAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTATTCAGCGTGCGCAACGCCGCCAGCGAACAg                                                                          >  2:1169754/1‑96 (MQ=255)                                                                                                                                   gCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTATTCAGCGTGCGCAACGCCGCCAGCGAACAGGTACTGGGCATCCTCAAACCGCTGATCGACCCGCGAGTTGGGGTTATTACACCGTa                  <  1:340594/150‑1 (MQ=255)                                                                                                                                       gTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTATTCAGCGTGCGCAACGCCGCCAGCGAACAGGTACTGGTCATCCTCAAACCGCTGATCGACCCGCGAGTTGGGGTTATTACACCGTACCcg              >  2:1040872/1‑150 (MQ=255)                                                                                                                                           cAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTATTCAGCGTGCGCAACGCCGCCAGCGAACAGGTACTGGGCATCCTCAAACCGCTGATCGACCCGCGAGTTGGGGTTATTACACCGTACCcggcgg          >  2:159790/1‑150 (MQ=255)                                                                                                                                             gTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTATTCAGCGTGCGCAACGCCGCCAGCGAACAGGTACTGGGCATCCTCAAACCGCTGATCGACCCGCGAGTTGGGGTTATTACACCGTACCCGgcggcg        <  1:467683/150‑1 (MQ=255)                                                                                                                                                gAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTATTCAGCGTGCGCAACGCCGCCAGCGAACAGGTACTGGGCATc                                                              <  2:1471935/93‑1 (MQ=255)                                                                                                                                                gAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTATTCAGCGTGCGCAACGCCGCCAGCGAACAGGTACTGGGCATc                                                              >  1:1471935/1‑93 (MQ=255)                                                                                                                                                ctggcgggcgGGCAGCAGGGCGAGGGCCGCGACAGAGTGGCCCCCCGCGTATTCAGCGTGCGCAACGCCGCCAGCGAACCGGTACTGGGCATCCTCAACCCGCTGATCGACCCGCGAGTTGGGGTTATTACACCGTACCCGGCGGCGCAc     <  2:1591103/148‑1 (MQ=255)                                                                                                                                                  ggcgggcgGGCAGCAGGGCGAGGGCAGAGACAGCGTGGCCACCCGCGTATTCAGCGTGCGCAACGCCGCCAGCGAACAGGTACTGGGCATCCTCAAACCGCTGATCGACCCGCGAGTTGGGGTTATTACACCGTACCCGGCGGCGCACCa   <  2:353281/150‑1 (MQ=255)                                                                                                                                                   gcgggcggGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTATTCAGCGTGCGCAACGCCGCCAGCGAACAGGTACTGGGCATCCTCAAACCGCTGATCGACCCGCGAGTTGGGGTTATTACACCGTACCCGGCGGCGCACCAg  >  1:1591103/1‑150 (MQ=255)                                                                                                                                                      |                                                                                                                                                   CCGTCGACCTGCACGACGCCGACGCCATCTACGACATCTTCCTGGCCCAACTGCGCGCCCAGGGCTATGCCACCGTCGACCTGCCCAACGGCAGCGTGAAAATCGTGCCCGACCAGGCCGCGCGCCTGGAGCCGGTGCCAGTGGAGGCGGGCGGGCAGCAGGGCGAGGGCAGCGACAGCGTGGCCACCCGCGTATTCAGCGTGCGCAACGCCGCCAGCGAACAGGTACTGGGCATCCTCAAACCGCTGATCGACCCGCGAGTTGGGGTTATTACACCGTACCCGGCGGCGCACCAG  >  NC_002947/1196157‑1196452

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.