New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3029501	65 (1.090)	6 (0.110)	6/222	NT	9.0%	coding (1111/1653 nt)	pcaY	aromatic acid chemoreceptor
	?	NC_002947	= 3029514	61 (1.100)					coding (1124/1653 nt)	pcaY	aromatic acid chemoreceptor

CGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAACATCGACGGCACCGAAGCCATGACCCGCGAAATCCAGACCAGCAGTGCGCACCTGCAGCAGTTGGTGGGGCAGGTGCGGGACATCGGC‑AAGGTGCTGGAAGTGATCCGCTCGGTGTCCGAGCAAACCAACCTGCTGGCGCTCAATGCTGCCATCGAGGCGGCCCGTGCCGGTGAGGCCGGGCGCGGCTTTGCGGTGGTGGCGGATGAGGTGCGCA  >  NC_002947/3029366‑3029660                                                                                                                                                     |                                                                                                                                                    cgcAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAACATCGACGGCACCGAAGCCATGACCCGCGAAATCCAGACCAGCAGTGCGCACCTGCAGCAGTTGGTGGGg                                                                                                                                                    >  1:20144‑M2/1‑149 (MQ=255)    aaCGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAACATCGACGGCACCGAAGCCATGACCCGCGAAATCCAGACCAGCAGTGCGCACCTGCAGCAGTTGGTGGGgcag                                                                                                                                                 >  1:7178‑M2/1‑146 (MQ=255)    aaCGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAACATCGACGGCACCGAAGCCATGACCCGCGAAATCCAGACCAGCAGTGCGCACCTGCAGCAGTTGGTGGGgcag                                                                                                                                                 >  2:717434‑M2/1‑146 (MQ=255)        cgATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAACATCGACGGCACCGAAGCCATGACCCGCGAAATCCAGACCAGCAGTTCGCACCTGCAGCAGTTGGTGGGgcaggtgc                                                                                                                                             >  2:723021‑M2/1‑142 (MQ=255)          aTCACCACCTCTCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAACATCGACGGCACCGAAGCCATGACCCGCGAAATCCAGACCAGCAGTGCGCACCTGCAGCAGTTGGTGGGGCAGGTGCgg                                                                                                                                           <  1:600917/150‑1 (MQ=255)          aTCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAACATCGACGGCACCGAAGCCATGACCCGCGAAATCCAGACCAGCAGTGCGCACCTGCAGCAGTTGGTGGGGCAGGTGCgg                                                                                                                                           <  1:1047226/150‑1 (MQ=255)           tCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCAAAGCCGACGGCAAGTCAGCGAAAACATCGACGGCACCGAAGCCATGACCCGCGAAATCCAGACCAGCAGTGCGCACCTGCAGCAGTTGGTGGGGCAGGTGCggg                                                                                                                                          >  2:1626033/1‑150 (MQ=255)              ccaccTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAACATCGACGGCACCGAAGCCATGACCCGCGAAATCCAGACCAGCAGTGCGCACCTGCAGCAGTTGGTGGGGCAGGTGCGGGACa                                                                                                                                       >  1:1554876/1‑150 (MQ=255)                     gCAAACCACCAGTGAATCCAACCAGCTGGCCGAAAGAGGCCGCCGGCAAGTCAGCGAAAACATCGACGGCACCGAAGCCATGACCCGCGAAATCCAGACCAGCAGTGCGCACCTGCAGCAGTTGGTGGGGCAGGTGCGGGACATCGGC‑aa                                                                                                                               >  1:794124/1‑150 (MQ=255)                            accaGTGAATCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAACATCGACGGCACCGAAGCCATGACCCGCGAAATCCAGACCAGCAGTGCGCACCTGCAGCAGTTGGTGGGGCAGGTGCGGGACATCGGC‑AAGGTGCTg                                                                                                                        <  2:1554876/150‑1 (MQ=255)                              caGTGAATCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAACATCGACGGCACCGAAGCCATGACCCGCGAAATCCAGACCAGCAGTGCGCACCTGCAGCAGTTGGTGGGGCAGGTGCGGGACATCGGC‑AAGGTGCTGGa                                                                                                                      >  1:99360/1‑150 (MQ=255)                               aGTGAATCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAACATCGACGGCACCGAAGCCATGACCCGCGAAATCCAGACCAGCAGTGCGCACCTGCAGCAGTTGGTGGGGCAGGTGCGGGACATCGGC‑AAGGTGCTGGaa                                                                                                                     <  2:462368/150‑1 (MQ=255)                               aGTGAATCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAACATCGACGGCACCGAAGCCATGACCCGCGAAATCCAGACCAGCAGTGCGCACCTGCAGCAGTTGGTGGGGCAGGTGCGGGACATCGGC‑AAGGTGCTGGaa                                                                                                                     <  1:1627686/150‑1 (MQ=255)                                gTGAATCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAACATCGACGGCACCGAAGCCATGACCCGCGAAATCCAGACCAGCAGTGCGCACCTGCGGCAGTTGGTGGGGCAGGTGCgg                                                                                                                                           >  2:1186713/1‑128 (MQ=255)                                gTGAATCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAACATCGACGGCACCGAAGCCATGACCCGCGAAATCCAGACCAGCAGTGCGCACCTGCCCCACCAACTGCTgcaggtgcgcactgctggtctggatt                                                                                                                           <  2:1642950‑M2/144‑27 (MQ=255)                                gTGAATCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAACATCGACGGCACCGAAGCCATGACCCGCGAAATCCAGACCAGCAGTGCGCACCTGCCCCACCAACTGCTgcaggtgcgcactgctggtctggatt                                                                                                                           >  1:1642950‑M2/1‑118 (MQ=255)                                gTGAATCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAACATCGACGGCACCGAAGCCATGACCCGCGAAATCCAGACCAGCAGTGCGCACCTGCAGCAGTTGGTGGGGCAGGTGCgg                                                                                                                                           <  1:1186713/128‑1 (MQ=255)                                gTGAATCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAACATCGACGGCACCGAAGCCATGACCCGCGAAATCCAGACCAGCAGTGCGCACCTGCAGCAGTTGGTGGGGCAGGTGCGGGACATCGGC‑AAGGTGCTGGAAg                                                                                                                    >  2:1552403/1‑150 (MQ=255)                                 tGAATCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAACATCGACGGCACCGAAGCCATGACCCGCGAAATCCAGACCAGCAGTGCGCACCTGCAGCAGTTGGTGGGGCAGGTGCgg                                                                                                                                           <  1:481050/127‑1 (MQ=255)                                 tGAATCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAACATCGACGGCACCGAAGCCATGACCCGCGAAATCCAGACCAGCAGTGCGCACCTGCAGCAGTTGGTGGGGCAGGTGCgg                                                                                                                                           >  2:481050/1‑127 (MQ=255)                                 tGAATCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAACATCGACGGCACCGAAGCCATGACCCGCGAAATCCAGACCAGCAGTGCGCACCTGCAGCAGTTGGTGGGGCAGGTGCGGGACATCGGC‑AAGGTGCTGGCAGt                                                                                                                   >  2:653202/1‑150 (MQ=255)                                   aaTCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAACATCGACGGCACCGAAGCCATGACCCGCGAAATCCAGACCAGCAGTGCGCACCTGCAGCAGTTGGTGGGGCAGGTGCGGGACATCGGC‑AAGGTGCTGGAAGTGa                                                                                                                 <  2:1397004/150‑1 (MQ=255)                                    aTCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAACATCGACGGCACCGAAGCCATGACCCGCGAAATCCAGACCAGCAGTGCGCACCTGCAGCAGTTGGTGGGGCAGGTGCggg                                                                                                                                          >  2:1393005/1‑125 (MQ=255)                                    aTCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAACATCGACGGCACCGAAGCCATGACCCGCGAAATCCAGACCAGCAGTGCGCACCTGCAGCAGTTGGTGGGGCAGGTGCggg                                                                                                                                          <  1:1393005/125‑1 (MQ=255)                                     tCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAACATCGACGGCACCGAAGCCATGACCCGCGAAATCCAGACCAGCAGTGCGCACCTGCAGCAGTTGGTGGGGCAGGTGCGGGACATCGGC‑AAGGTGCTGGAAGTGATc                                                                                                               <  1:1628624/150‑1 (MQ=255)                                        aaCCAGCTGGCCGCGCAACGCCGCCGGCAAGTCAGCGAAAACATCGACGGCACCGAAGCCATGACCCGCGAAATCCAGACCAGCAGTGCGCACCTGCAGCAGTTGGTGGGGCAGGTGCgg                                                                                                                                           <  2:121532/120‑1 (MQ=255)                                        aaCCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAACATCGACGGCACCGAAGCCATGACCCGCGAAATCCAGACCAGCAGTGCGCACCTGCAGCAGTTGGTGGGGCAGGTGCgg                                                                                                                                           >  1:121532/1‑120 (MQ=255)                                           cAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGAGAAAACATCGACGGCACCGAAGCCATGACCCGCGAAATCCAGACCAGCAGTGCTCACCTGCAGCAGTTGGTGGGGCAGGTGCGGGACATCGGC‑AAGGTGCTGGAAGTGATCCGCTCg                                                                                                         <  2:650033/150‑1 (MQ=255)                                            aGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAACATCGACGGCACCGAAGCCATGACCCGCGAAATCCAGACCAGCAGTGCGCACCTGCAGCAGTTGGTGGGACAGGTGCGGGACATCGGC‑AAGGTGCTGGAAGTGATCCGCTCgg                                                                                                        >  1:1116891/1‑150 (MQ=255)                                               tGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAACATCGACGGCACCGAAGCCATGACCCGCGAAATCCAGACCAGCAGTGCGCACCTGCAGCAGTTGGTGGGACAGGTGCGGGACATCGGC‑AAGGTGCTGGAAGTGATCCGCTCGgtgt                                                                                                     <  2:1116891/150‑1 (MQ=255)                                                          aGCCGCCGGCAAGTCAGCGAAAACATCGACGGCACCGAAGCCATGACCCGCGAAATCCAGACCAGCAGTGCGCACCTGCAGCAGTTGGTGGGGCAGGTGCGGGACATCGGC‑AAGGTGCTGGAAGTGATCCGCTCGGTGTCCGAGCAaacc                                                                                          >  1:137037/1‑150 (MQ=255)                                                                 ggCAAGTCAGCGAAAACATCGACGGCACCGAAGCCATGACCCGCGAAATCCAGACCAGCAGTGCGCCCATGCACATGGTGGTGGGGTAAGTGCGGGACATCGGC‑AAGGTGCTGGAAGTGATCCGCTCGGTGTCCGAGCAAACCAACctgc                                                                                   <  1:1018354/150‑1 (MQ=255)                                                                   cAAGTCAGCGAAAACATCGACGGCACCGAAGCCATGACCCGCGAAATCCAGACCAGCAGTGCGCACCTGCAGCAGTTGGTGGGGCAGGTGCGGGACATCGGC‑AAGGTGCTGGAAGTGATCCGCTCGGTGTCCGAGCAAACCAACctgctg                                                                                 <  2:1529993/150‑1 (MQ=255)                                                                     aGTCAGCGAAAACATCGACGGCACCGAAGCCATGACCCGCGAAATCCAGACCAGCAGTGCGCACCTGCAGCAGTTGGTGGGGCAGGTGCGGGa                                                                                                                                         <  2:669168/93‑1 (MQ=255)                                                                     aGTCAGCGAAAACATCGACGGCACCGAAGCCATGACCCGCGAAATCCAGACCAGCAGTGCGCACCTGCAGCAGTTGGTGGGGCAGGTGCGGGa                                                                                                                                         >  1:669168/1‑93 (MQ=255)                                                                      gTCAGCGAAAACATCGACGGCACCGAAGCCATGACCCGCGAAATCCAGACCAGCAGTGCGCACCTGCAGCAGTTGGTGGGGCAGGTGCGGGACATCGGC‑AAGGTGCTGGAAGTGATCCGCTCGGTGTCCGAGCAAACCAACCTGCTGgcg                                                                              >  2:1483790/1‑150 (MQ=255)                                                                      gTCAGCGAAAACATCGACGGCACCGAAGCCATGACCCGCGAAATCCAGACCAGCAGTGCGCACCTGCAGCAGTTGGTGGGGCAGGTGCGGGACATCGGC‑AAGGTGCTGGAAGTGATCCGCTCGGTGTCCGAGCAAACCAACCTGCTGgcg                                                                              >  2:54662/1‑150 (MQ=255)                                                                      gTCAGCGAAAACATCGACGGCACCGAAGCCATGACCCGCGAAATCCAGACCAGCAGTGCGCACCTGCAGCAGTTGGTGGGGCAGGTGCGGGACATCGGC‑AAGGTGCTGGAAGTGATCCGCTCGGTGTCCGAGCAAACCAACCTGCTGgcg                                                                              >  2:54663/1‑150 (MQ=255)                                                                       tCAGCGAAAACATCGACGGCACCGAAGCCATGACCCGCGAAATCCAGACCAGCAGTGCGCACCTGCAGCAGTTGGTGGGGCAGGTGCGGGACATCGGC‑AAGGTGCTGGAAGTGATCCGCTCGGTGTCCGAGCAAACCAACCTGCTGgcgc                                                                             >  2:203509/1‑150 (MQ=255)                                                                        cAGCGAAAACATCGACGGCACCGAAGCCATGACCCGCGAAATCCAGACCAGCAGTGCGCACCTGCAGCAGTTGGTGGGGCAGGTGCGGGACATCGGC‑AAGGTGCTGGAAGTGATCCGCTCGGTGTCCGAGCAAACCAACCTGCTGGCGCt                                                                            <  1:54662/150‑1 (MQ=255)                                                                        cAGCGAAAACATCGACGGCACCGAAGCCATGACCCGCGAAATCCAGACCAGCAGTGCGCACCTGCAGCAGTTGGTGGGGCAGGTGCGGGACATCGGC‑AAGGTGCTGGAAGTGATCCGCTCGGTGTCCGAGCAAACCAACCTGCTGGCGCt                                                                            <  1:54663/150‑1 (MQ=255)                                                                          gCGAAAACATCGACGGCACCGAAGCCATGACCCGCGAAATCCAGACCAGCAGTGCGCACCTGCAGCAGTTGGTGGGGCAGGTGCGGGACATCGGC‑AAGGTGCTGGAAGTGATCCGCTCGGTGTCCGAGCAAACCAACCTGCTGGCGCTCa                                                                          <  2:137037/150‑1 (MQ=255)                                                                               aaCATCGACGGCACCGAAGCCATGACCCGCGAAATCCAGACCAGCAGTGCGCACCTGCAGCAGTTGGTGGGGCAGGTGCGGGACATCGGC‑AAGGTGCTGGAAGTGATCCGCTCGGTGTCCGAGCAAACCAACCTGCTGGCGCTCAAtgct                                                                     <  2:99360/150‑1 (MQ=255)                                                                                  aTCGACGGCACCGAAGCCATGACCCGCGAAATCCAGACCAGCAGTGCGCACCTGCAGCAGTTGGTGGGGCAGGTGCGGGACATCGGC‑AAGGTGCTGGAAGTGATCCGCTCGGTGTCCGAGCAAACCAACCTGCTGGCGCTCAATGCTGcc                                                                  >  1:417259/1‑150 (MQ=255)                                                                                             cGAAGCCATGACCCGCGAAATCCAGACCAGCAGTGCGCACCTGCAGCAGTTGGTGGGGCAGGTGCGGGACATCgg                                                                                                                                   >  2:477192/1‑75 (MQ=255)                                                                                             cGAAGCCATGACCCGCGAAATCCAGACCAGCAGTGCGCACCTGCAGCAGTTGGTGGGGCAGGTGCGGGACATCgg                                                                                                                                   <  1:477192/75‑1 (MQ=255)                                                                                             cGAAGCCATGACCCGCGAAATCCAGACCAGCAGTGCGCACCTGCAGCAGTTGGTGGGGCAGGTGCGGGACATCGGC‑AAGGTGCTGGAAGTGATCCGCTCGGTGTCCGAGCAAACCAACCTGCTGGCGCTCAATGCTGCCATCGAggcggc                                                       >  1:927729/1‑150 (MQ=255)                                                                                               aaGCCATGACCCGCGAAATCCAGACCAGCAGTGCGCACCTGCAGCAGTTGGTGGGGCAGGTGCGGGACATCGGC‑AAGGTGCTGGAAGTGATCCGCTCGGTGTCCGAGCAAACCAACCTGCTGGCGCTCAATGCTGCCATCGAGGCGGccc                                                     >  1:1286407/1‑150 (MQ=255)                                                                                                  ccATGACCCGCGAAATCCAGACCAGCAGTGCGCACCTGCAGCAGTTGGTGGGGCAGGTGCGGGACATCGGC‑AAGGTGCTGGAAGTGATCCGCTCGGTGTCCGAGCAAACCAACCTGCTGGCGCTCAATGCTGCCATCGAGGCGGCCCGTg                                                  >  1:1604012/1‑150 (MQ=255)                                                                                                   cATGACCCGCGAAATCCAGACCAGCAGTGCGCACCTGCAGCAGTTGGTGGGGCAGGTGCGGGACATCGGC‑CGGGTGCTGGAAGTGATCAGCTCGGTGACCGCGCAAACCAACCTGGTGGCGCTCAATCCGGCCACCGAGGCGGCGCGTGc                                                 >  2:281980/1‑150 (MQ=255)                                                                                                   cATGACCCGCGAAATCCAGACCAGCAGTGCGCACCTGCAGCAGTTGGTGGGGCAGGTGCGGGACATCGGC‑AAGGTGCTGGAAGTGATCCGCTCGGTGTCCGAGCAAACCAACCTGCTGGCGCTCAATGCTGCCATCGAGGCGGCCCGTGc                                                 <  1:1552403/150‑1 (MQ=255)                                                                                                    aTGACCCGCGAAATCCAGACCAGCAGTGCGCACCTGCAGCAGTTGGTGGGGCAGGTGCGGGACATCGGC‑AAGGTGCTGGAAGTGATCCGCTCGGTGTCCGAGCAAACCAACCTGCTGGCGCTCAATGCTGCCATCGAGGCGGCCCGTGcc                                                >  2:1460689/1‑150 (MQ=255)                                                                                                        cccGCGAAATCCAGACCAGCAGTGCGCACCTGCAGCAGTTGGTGGGGCAGGTGCGGGACATCGGC‑AAGGTGCTGGAAGTGATCCGCTCGGTGTCCGAGCAAACCAACCTGCTGGCGCTCAATGCTGCCATCGAGGCGGCCCGTGCCGGTg                                            >  2:938256/1‑150 (MQ=255)                                                                                                         ccGCGAAATCCAGACCAGCAGTGCGCACCTGCAGCAGTTGGTGGGGCAGGTGCGGGACATCGGC‑AAGGTGCTGGAAGTGATCCGc                                                                                                            >  1:1592173/1‑85 (MQ=255)                                                                                                         ccGCGAAATCCAGACCAGCAGTGCGCACCTGCAGCAGTTGGTGGGGCAGGTGCGGGACATCGGC‑AAGGTGCTGGAAGTGATCCGc                                                                                                            <  2:1592173/85‑1 (MQ=255)                                                                                                          cgcgAAATCCAGACCAGCAGTGCGCACCTGCAGCAGTTGGTGGGGCAGGTGCGGGACATCGGC‑AAGGTGCTGGAAGTGATCCGCTCGGTGTCCGAGCAAACCAACCTGCTGGCGCTCAATGCTGCCATCGAGGCGGCCCGTGCCGGTGAg                                          >  1:944373/1‑150 (MQ=255)                                                                                                          cgcgAAATCCAGACCAGCAGTGCGCACCTGCAGCAGTTGGTGGGGCAGGTGCGGGACATCGGC‑AAGGTGCTGGAAGTGATCCGCTCGGTGTCCGAGCAAACCAACCTGCTGGCGCTCAATGCTGCCATCGAGGCGGCCCGTGCCGGTGAg                                          >  1:1560535/1‑150 (MQ=255)                                                                                                           gcgAAATCCAGACCAGCAGTGCGCACCTGCAGCAGTTGGTGGGGCAGGTGCGGGACATCGGC‑AAGGTGCTGGAAGTGATCCGCTCGGTGTCCGAGCAAACCAACCTGCTGGCGCTCAATGCTGCCATCGAGGCGGCCCGTGCCGGTGAgg                                         >  1:245151/1‑150 (MQ=255)                                                                                                            cgAAATCCAGACCAGCAGTGCGCACCTGCAGCAGTTGGTGGGGCAGGTGCGGGACATCGGC‑AAGGTGCTGGAAGTGATCCGCTCGGTGTCCGAGCAAACCAACCTGCTGGCGCTCAATGCTGCCATCGAGGCGGCCCGTGCCGGTGAGGc                                        <  2:728083/150‑1 (MQ=255)                                                                                                                  ccAGACCAGCAGTGCGCACCTGCAGCAGTTGGTGGGGCAGGTGCGGGACATCGGC‑AAGGTGCTGGAAGTGATCCGCTCGGTGTCCGAGCAAACCAACCTGCTGGCGCTCAATGCTGCCATCGAGGCGGCCCGTGCCGGTGAGGCCGGgcg                                  >  1:1073136/1‑150 (MQ=255)                                                                                                                     gACCAGCAGTGCGCACCTGCAGCAGTTGGTGGGGCAGGTGCGGGACATCGGC‑AAGGTGCTGGAAGTGATCCGCTCGGTGTCCGAGCAAACCAACCTGCTGGCGCTCAATGCTGCCATCGAGGCGGCCCGTGCCGGTGAGGCCGGGCGCgg                               <  2:927729/150‑1 (MQ=255)                                                                                                                     gACCAGCAGTGCGCACCTGCAGCAGTTGGTGGGGCAGGTGCGGGACATCGGC‑AAGGTGCTGGAAGTGATCCGCTCGGTGTCCGAGCAAACCAACCTGCTGGCGCTCAATGCTGCCATCGAGGCGGCCCGTGCCGGTGAGGCCGGGCGCgg                               <  1:257593/150‑1 (MQ=255)                                                                                                                      aCCAGCAGTGCGCACCTGCAGCAGTTGGTGGGGCAGGTGCGGGACATCGGC‑AAGGTGCTGGAAGTGATCCGCTCGGTGTCCGAGCAAACCAACCTGCTGGCGCTCAATGCTGCCATCGAGGCGGCCCGTGCCGGt                                             <  2:1339857/135‑1 (MQ=255)                                                                                                                      aCCAGCAGTGCGCACCTGCAGCAGTTGGTGGGGCAGGTGCGGGACATCGGC‑AAGGTGCTGGAAGTGATCCGCTCGGTGTCCGAGCAAACCAACCTGCTGGCGCTCAATGCTGCCATCGAGGCGGCCCGTGCCGGt                                             >  1:1339857/1‑135 (MQ=255)                                                                                                                        cagcagTGCGCACCTGCAGCAGTTGGTGGGGCAGGTGCGGGACATCGGC‑AAGGTGCTGGAAGTGATCCGCTCGGTGTCCGAGCAAACCAACCTGCTGGCGCTCAATGCTGCCATCGAGGCGGCCCGTGCCGGTGAGGCCgg                                     <  2:328172/141‑1 (MQ=255)                                                                                                                        cagcagTGCGCACCTGCAGCAGTTGGTGGGGCAGGTGCGGGACATCGGC‑AAGGTGCTGGAAGTGATCCGCTCGGTGTCCGAGCAAACCAACCTGCTGGCGCTCAATGCTGCCATCGAGGCGGCCCGTGCCGGTGAGGCCgg                                     >  1:328172/1‑141 (MQ=255)                                                                                                                              tGCGCACCTGCAGCAGTTGGTGGGGCAGGTGCGGGACATCGGC‑AAGGTGCTGGAAGTGATCCGCTCGGTGTCCGAGCAAACCAACCTGCTGGCGCTCAATGCTGCCATCGAGGCGGCCCGTGCCGGTGAGGCCGGGCGCGGCTTTGCggt                      <  2:417259/150‑1 (MQ=255)                                                                                                                                cgcACCTGCAGCAGTTGGTGGGGCAGGTGCGGGACATCGGC‑AAGGTGCTGGAAGTGATCCGCTCGGTGTCCGAGCAAACCAACCTGCTGGCGCTCAATGCTGCCATCGAGGCGGCCCGTGCCGGTGAGGCCGGGCGCGGCTTTGcggcgg                    <  2:1046423/150‑1 (MQ=255)                                                                                                                                  cACCTGCAGCAGTTGGTGGGGCAGGTGCGGGACATCGGC‑AAGGTGCTGGAAGTGATCCGCTCGGTGTCCGAGCAAACCAACCTGCTGGCGCTCAATGCTGCCATCGAGGCGGCCCGTGCCGGTGAGGCCGGGCGCGGCTTTGCGgtggtg                  <  1:661689/150‑1 (MQ=255)                                                                                                                                   aCCTGCAGCAGTTGGTGGGgcaggtgcgcactgctggtctggatttcgcgggtcatggcttcggtgccgt                                                                                                  <  1:753566‑M2/70‑52 (MQ=255)                                                                                                                                   aCCTGCAGCAGTTGGTGGGgcaggtgcgcactgctggtctggatttcgcgggtcatggcttcggtgccgt                                                                                                  >  2:753566‑M2/1‑19 (MQ=255)                                                                                                                                   aCCTGCAGCAGTTGGTGGGGCAGGTGCGGGACATCGGC‑AAGGTGCTGGAAGTGATCCGCTCGGTGTCCGAGCAAACCAACCTGCTGGCGCTCAATGCTGCCATCGAGGCGGCCCGTGCCGGTGAGGCCGGGCGCGGCTTTGCGGtggtgg                 <  1:508404/150‑1 (MQ=255)                                                                                                                                    ccTGCAGCAGTTGGTGGGgcaggtgcgcactgctggtctggatttcgcgggtcatggcttcggtgccgtcgatgttt                                                                                          >  2:375498‑M2/1‑18 (MQ=255)                                                                                                                                    ccTGCAGCAGTTGGTGGGgcaggtgcgcactgctggtctggatttcgcgggtcatggcttcggtgccgtcgatgttt                                                                                          <  1:375498‑M2/77‑60 (MQ=255)                                                                                                                                     cTGCAGCAGTTGGTGGGGCAGGTGCGGGACATCGGC‑AAGGTGCTGGAAGTGATCCGCTCGGTGTCCGAGCAAACCAACCTGCTGGCGCTCAATGCTGCCATCGAg                                                            >  2:1282433/1‑105 (MQ=255)                                                                                                                                     cTGCAGCAGTTGGTGGGGCAGGTGCGGGACATCGGC‑AAGGTGCTGGAAGTGATCCGCTCGGTGTCCGAGCAAACCAACCTGCTGGCGCTCAATGCTGCCATCGAg                                                            <  1:1282433/105‑1 (MQ=255)                                                                                                                                      ggcagccGTGGGTGGGGCAGGTGGGGTACATCGGC‑AAGGTGCTTGAAGTGAGCCGCTCGGTGTCCGAGCAAACCAACCTGCTGGCGCTCAATGCTGCCATCGAGGCGTCCCGTGCCGGTGAGGCCGGGCGCGGCTTTGCGGTGGTGGCgg              <  1:281980/149‑1 (MQ=37)                                                                                                                                       gcagcaGTTGGTGGGGCAGGTGCGTGACATCGGC‑AAGGTGCTGGAAGTGATCCGCTCGGTGTcc                                                                                                   <  2:303579/64‑1 (MQ=255)                                                                                                                                       gcagcaGTTGGTGGGGCAGGTGCGTGACATCGGC‑AAGGTGCTGGAAGTGATCCGCTCGGTGTcc                                                                                                   >  1:303579/1‑64 (MQ=255)                                                                                                                                       gcagcaGTTGGTGGGGCAGGTGCGGGACATCGGC‑AAGGTGCTGGAAGTGATCCGCTCGGTGTCCGAGCAAACCAACCTGCTGGCGCTCAATGCTGCCATCGAGGCGGCCCGTGCCGGTGAGGCCGGGCGCGGCTTTGCGGTGGTGGCGGa             >  1:687026/1‑150 (MQ=255)                                                                                                                                         agcagTTGGTGGGGCAGGTGCGGGACATCGGCAAAGGTTC‑GGAAGTGATCCGCTCGGTGTCCGAGCAAACCAACCTGCTGGCGCTCAATGCTGCCATCGAGGCGGCCCGTGCCGGTGAGGCCGGGCGCGGCTTTGCGGTGGTGGCGGATg           <  2:794124/150‑1 (MQ=255)                                                                                                                                         agcagTTGGTGGGGCAGGTGCGGGACATCGGC‑AAGGTGCTGGAAGTGATCCGCTCGGTGTCCGAGCAAACCAACCTGCTGGCGCTCAATGCTGCCATCGAGGCGGCCCGTGCCGGTGAGGCCGGGCGCGGCTTTGCGGTGGTGGCGGATg           >  1:824801/1‑150 (MQ=255)                                                                                                                                           ccgTTGGTGGGGCAGGTGCGGAACATCGGC‑AAGGTGCTGGAAGTGATCCGCTCGGTGTCCGAGCAAACCAACCTGCTGGCGCTCAATGCTGCCATCGAGGCGGCCCGTGCCGGTGTGGCCGGGCGCGGCGTTGCGGTGGTGGCGGATGAg         <  1:653202/148‑1 (MQ=255)                                                                                                                                             gTTGGTGGGGCAGGTGCGGGACATCGGC‑AAGGTGCTGGAAGTGATCCGCTCGGTGTCCGAGCAAACCAACCTGCTGGCGCTCAATGCTGCCATCGAGGCGGCCCGTGCCGGTGAGGCCGGGCGCGGCTTTGCGGTGGTGGCGGATGAGGt       <  1:1460689/150‑1 (MQ=255)                                                                                                                                              ttGGTGGGGCAGGTGCGGGACATCGGC‑AAGGTGCTGGAAGTGATCCGCTCGGTGTCCGAGCAAACCAACCTGCTGGCGCTCAATGCTGCCATCGAGGCGGCCCGTGCCGGTGAGGCCGGGCGCGGCTTTGCGGTGGTGGCGGATGAGGTg      >  1:1155761/1‑150 (MQ=255)                                                                                                                                                  tggGGCAGGTGCGGGACATCGGC‑AAGGTGCTGGAAGTGATCCGCTCGGTGTCCGAGCAAACCAACCTGCTGGCGCTCAATGCTGCCATCGAGGCGGCCCGTGCCGGTGAGGCCGGGCGCGGCTTTGCGGTGGTGGCGGATGAGGTGCGca  >  1:1121576/1‑150 (MQ=255)                                                                                                                                                     |                                                                                                                                                    CGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAACATCGACGGCACCGAAGCCATGACCCGCGAAATCCAGACCAGCAGTGCGCACCTGCAGCAGTTGGTGGGGCAGGTGCGGGACATCGGC‑AAGGTGCTGGAAGTGATCCGCTCGGTGTCCGAGCAAACCAACCTGCTGGCGCTCAATGCTGCCATCGAGGCGGCCCGTGCCGGTGAGGCCGGGCGCGGCTTTGCGGTGGTGGCGGATGAGGTGCGCA  >  NC_002947/3029366‑3029660

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.