New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4266591	48 (0.800)	5 (0.100)	5/206	NT	9.0%	intergenic (‑89/+57)	PP_3738/galP‑IV	transcriptional regulator VanR/porin‑like protein
	?	NC_002947	= 4266628	60 (1.170)					intergenic (‑126/+20)	PP_3738/galP‑IV	transcriptional regulator VanR/porin‑like protein

GACCGGGTTTGCTCATCCAGGCGACTTCCAAAGACATGAGCGGGCATCTTAGCGCAAGCCGAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAGCTGCGCCGGTTGGTCGCGTTGTTCAGCCGGATGTTGAGGTTCTTCAAAGCCCCGCTCTGGAAGGTG  >  NC_002947/4266487‑4266771                                                                                                                                              |                                                                                                                                                gACCGGGTTTGCTCATCCAGGCGACTTCCAAAGACATGAGCGGGCATCTTAGCGCAAGGCGAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGttcgcggg                                                                                                                                         >  1:625881‑M2/1‑142 (MQ=255) gACCGGGTTTGCTCATCCAGGCGACTTCCAAAGACATGAGCGGGCATCTTAGCGCAAGCCGAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGttcgcggg                                                                                                                                         <  1:632243‑M2/150‑9 (MQ=255)             tCATCCAGGCGACTTCCAAAGACATGAGCGGGCATCTTAGCGCAAGCCGAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGcccc                                                                                                                             >  1:703513/1‑150 (MQ=255)             tCATCCAGGCGACTTCCAAAGACATGAGCGGGCATCTTAGCGCAAGCCGAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGcccc                                                                                                                             >  2:1378659/1‑150 (MQ=255)             tCATCCAGGCGACTTCCAAAGACATGAGCGGGCATCTTAGCGCAAGCCGAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGcccc                                                                                                                             >  1:1457485/1‑150 (MQ=255)               aTCCAGGCGACTTCCAAAGACATGAGCGGGCATCTTAGCGCAAGCCGAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTa                                                                                                                           >  1:687547/1‑150 (MQ=255)                tCCAGGCGACTTCCAAAGACATGAGCGGGCATCTTAGCGCAAGCCGAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTAc                                                                                                                          >  1:1285012/1‑150 (MQ=255)                 ccAGGCGACTTCCAAAGACATGAGCGGGCATCTTAGCGCAAGCCGAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACa                                                                                                                         <  2:1285012/150‑1 (MQ=255)                   aGGCGACTTCCAAAGACATGAGCGGGCATCTTAGCGCAAGCCGAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCGGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAg                                                                                                                       >  2:432861/1‑150 (MQ=255)                             cAAAGACATGAGCGGGCATCTTAGCGCAAGCCGAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGAt                                                                                                             >  2:1518575/1‑150 (MQ=255)                             cAAAGACATGAGCGGGCATCTTAGCGCAAGCCGAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTAGCGGGTGAACCCGCCCCTACAAGGTCAGCGGAt                                                                                                             >  1:1339161/1‑150 (MQ=255)                               aaGACATGAGCGGGCATCTTAGCGCAAGCCGAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAg                                                                                                           <  2:703513/150‑1 (MQ=255)                               aaGACATGAGCGGGCATCTTAGCGCAAGCCGAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAg                                                                                                           >  1:184469/1‑150 (MQ=255)                                   cATGAGCGGGCATCTTAGCGCAAGCCGAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGa                                                                                                       <  2:1339161/150‑1 (MQ=255)                                    aTGAGCGGGCATCTTAGCGCAAGCCGAGGGGGTGCTGCAGGCCTGTTGTAGGAGCTGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGTTGTGCCCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGAc                                                                                                      >  2:1177320/1‑150 (MQ=39)                                         cGGGCATCTTAGCGCAAGCCGAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCa                                                                                                 <  2:1433961/150‑1 (MQ=255)                                           ggCATCTTAGCGCAAGCCGAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAgg                                                                                               <  1:911068/150‑1 (MQ=255)                                                   aGCGCAAGCCGAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAGGCGCGTCTg                                                                                       <  2:687547/150‑1 (MQ=255)                                                     aacAAGGCGAGGTGCGGCGGCATGCCTGTTGGAGCAGAGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCAGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAATGTCAGCGGATAGCTGACGATCAGGCGCGTCTGGt                                                                                     <  2:675727/148‑1 (MQ=25)                                                       cAAGCCGAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAGGCGCGTCTGGTCg                                                                                   >  1:868901/1‑150 (MQ=255)                                                             gAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAGgcgc                                                                                            <  1:1445438/135‑1 (MQ=255)                                                             gAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAGgcgc                                                                                            >  2:1445438/1‑135 (MQ=255)                                                                gggTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTg                                                                          <  1:1378659/150‑1 (MQ=255)                                                                 ggTTGCTGCAGGCCTGTTGTAGGACCGAGTTCGCCCACGAAGCAGACAACGCGGAACATGCCCCTTGTCTCGACGCTGTTCGCGGGTGACCCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGt                                                                         <  1:1518575/150‑1 (MQ=255)                                                                  gTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTg                                                                          >  2:1056855/1‑148 (MQ=255)                                                                  gTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTg                                                                          <  1:1056855/148‑1 (MQ=255)                                                                  gTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGtt                                                                        <  2:184469/150‑1 (MQ=255)                                                                   ttGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTg                                                                       >  2:806035/1‑150 (MQ=255)                                                                     gctgcAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGaa                                                                     <  1:1337815/150‑1 (MQ=255)                                                                      ctgcAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGACCCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAg                                                                    <  1:508775/150‑1 (MQ=255)                                                                          aGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAGCTgc                                                                >  2:1176231/1‑150 (MQ=255)                                                                            gCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAGCTgcgc                                                              <  1:362005/150‑1 (MQ=255)                                                                               tgttgtAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAGCTGCGCCgg                                                           >  2:1441263/1‑150 (MQ=255)                                                                                      ggAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAGCTGCGCCGGTTGGTcg                                                    >  2:479663/1‑150 (MQ=255)                                                                                         gCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGAc                                                                                                      <  2:926061/97‑1 (MQ=255)                                                                                         gCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGAc                                                                                                      >  1:926061/1‑97 (MQ=255)                                                                                         gCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAGGCGCGTCt                                                                                        <  2:1596560/111‑1 (MQ=255)                                                                                         gCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAGGCGCGTCt                                                                                        >  1:1596560/1‑111 (MQ=255)                                                                                            ggTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAGCTGCGCCGGTTGGTCGCgttgt                                              <  1:673732/150‑1 (MQ=255)                                                                                             gTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAGCTGCGCCGGTTGGTCGCgttgtt                                             >  1:623319/1‑150 (MQ=255)                                                                                              ttCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAGCTGCGCCGGTTGGTCGCGTTGTTc                                            >  1:970542/1‑150 (MQ=255)                                                                                                 aCCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGttcgcgggtgaacccgcccctacaacaggcctgcagcaa                                                                                                          <  1:1014130‑M2/85‑40 (MQ=255)                                                                                                 aCCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGttcgcgggtgaacccgcccctacaacaggcctgcagcaa                                                                                                          >  2:1014130‑M2/1‑46 (MQ=255)                                                                                                 aCCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGGGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAGCTGCGCCGGTTGGTCGCGTTGTTCAGc                                         >  1:1549638/1‑150 (MQ=255)                                                                                                  cccGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGttcgcgggtgaacccgctcctacaacaggcctgcagcaacccctcggcttgcgctaagatgcccgctcatgtctttggaagtcgcctggatgagcaaacccggtc                                        <  2:1345282‑M2/150‑106 (MQ=255)                                                                                                  cccGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAGCTGCGCCGGTTGGTCGCGTTGTTCAGcc                                        <  2:1457485/150‑1 (MQ=255)                                                                                                   ccGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCGGGCCCTACAAGGTCAGCGGATAGCTGACGACCAGGCGAATCTGGACGAGCTCACTGTTGAAGCTGCCCCGGTTGGTCGCGTTGTTCAGccc                                       >  2:179179/1‑149 (MQ=38)                                                                                                   ccGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAGCTGCGCCGGTTGGTCGCGTTGTTCAGCCg                                       >  1:637691/1‑150 (MQ=255)                                                                                                   ccGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGACGGTGttcgcgggtgaacccgctcctacaacaggcctgcagcaacccctcggcttgcgctaagatgcccgctcatgtctttggaagtcgcctggatgagcaaacccggtca                                       <  1:574284‑M2/150‑107 (MQ=255)                                                                                                    cgcgAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAGCTGCGCCGGTTGGTCGCGTTGTTCAGCCgg                                      >  1:1223749/1‑150 (MQ=255)                                                                                                     gcgAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAGCTGCGCCGGTTGGTCGCGTTGTTCAGCCGGa                                     >  2:1074593/1‑150 (MQ=255)                                                                                                     gcgAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAGCTGCGCCGGTTGGTCGCGTTGTTCAGCCGGa                                     <  1:806035/150‑1 (MQ=255)                                                                                                       gAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGt                                                                                                                                                <  1:1615604‑M2/41‑2 (MQ=255)                                                                                                       gAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGt                                                                                                                                                >  2:1615604‑M2/1‑40 (MQ=255)                                                                                                          gCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAGCTGCGCCGGTTGGTCGCGTTGTTCAGCCGGATGTTg                                <  2:1223749/150‑1 (MQ=255)                                                                                                            aGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGATCCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAGCTGCGCCGGTTGGTCGCGTTGTTCAGCCGGATGTTGAg                              <  1:432861/150‑1 (MQ=255)                                                                                                            aGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAGCTGCGCCGGTTGGTCGCGTTGTTCAGCCGGATGTTGAg                              <  2:623319/150‑1 (MQ=255)                                                                                                                aaCGCGGAACATGGCACCGGCTGCGCCGGTGttcgcgggtgaacccgctcctacaacaggcctgcagcaacccctcggcttgcgctaagatgcccgctcatgtctttggaagtcgcctggatgagcaaacccggtcagatggtgctggtt                          >  1:1345282‑M2/1‑31 (MQ=255)                                                                                                                aaCGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGa                                                                      <  2:227758/106‑1 (MQ=255)                                                                                                                aaCGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGa                                                                      >  1:227758/1‑106 (MQ=255)                                                                                                                  cgcgGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAGCTGCGCCGGTTGGTCGCGTTGTTCAGCCGGATGTTGTGGttctt                        <  1:1441263/150‑1 (MQ=255)                                                                                                                      gAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAGCTGCGCCGGTTGGTCGCGTTGTTCAGCCGGATGTTGAGGTTCTTCaaa                    <  2:970542/150‑1 (MQ=255)                                                                                                                            aacACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAg                                                                                                                       >  2:378871/3‑45 (MQ=255)                                                                                                                            aacACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAg                                                                                                                       <  1:378871/43‑1 (MQ=255)                                                                                                                                 cGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAGCTGCGCCGGTTGGTCGCGTTGTTCAGCCGGATGTTGAgg                             >  2:1161410/1‑130 (MQ=255)                                                                                                                                 cGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAGCTGCGCCGGTTGGTCGCGTTGTTCAGCCGGATGTTGAgg                             <  1:1161410/130‑1 (MQ=255)                                                                                                                                    cTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAGCTGCGCCGGTTGGTCGCGTTGTTCAGCCGGATGTTGAGGTTCTTCAAAGCCCCGCTCTGGaa      <  1:479663/150‑1 (MQ=255)                                                                                                                                     tGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAGCTGCGCCGGTTGGTCGCGTTGTTCAGCCGGATGTTGAGGTTCTTCAAAGCCCCGCTCTGGAAg     <  1:1337979/150‑1 (MQ=255)                                                                                                                                     tGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAGCTGCGCCGGTTGGTCGCGTTGTTCAGCCGGATGTTGAGGTTCTTCAAAGCCCCGCTCTGGAAg     <  1:1177320/150‑1 (MQ=255)                                                                                                                                     tGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAGCTGCGCCGGTTGGTCGCGTTGTTCAGCCGGATGTTGAGGTTCTTCAAAGCCCCGCTCTGGAAg     <  2:637691/150‑1 (MQ=255)                                                                                                                                     tGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAGCTGCGCCGGTTGGTCGCGTTGTTCAGCCGGATGTTGAGGTTCTTCAAAGCCCCGCTCTGGAAg     <  2:868901/150‑1 (MQ=255)                                                                                                                                     tGCGCCGGGGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGCCGCTGCGCCGGTGGGTCGCGTTGTTCAGCCGGATGTTGAGGTTCTTCAAAGCCCCGCTCTGGAAg     <  2:632243/150‑1 (MQ=255)                                                                                                                                        gcCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAGCTGCGCCGGTTGGTCGCGTTGTTCAGCCGGATGTTGAGGTTCTTCAAAGCCCCGCTCTGGAAGgtg  <  1:1074593/150‑1 (MQ=255)                                                                                                                                              |                                                                                                                                                GACCGGGTTTGCTCATCCAGGCGACTTCCAAAGACATGAGCGGGCATCTTAGCGCAAGCCGAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAGCTGCGCCGGTTGGTCGCGTTGTTCAGCCGGATGTTGAGGTTCTTCAAAGCCCCGCTCTGGAAGGTG  >  NC_002947/4266487‑4266771

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.