New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5653264 =68 (1.140)4 (0.070) 4/228 NT 5.9% coding (99/252 nt) PP_4962 hypothetical protein
?NC_002947 5653301 = 64 (1.130)coding (62/252 nt) PP_4962 hypothetical protein

TTTTCCAGGCCTTCCGGGCCCACGCGCTTGCCGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGCCACAGCTGGCAGGACCTTGCCCTCGACGAACTCGAGGAAGGCGCCACCACCGGTAG  >  NC_002947/5653154‑5653447
                                                                                                                                                   |                                                                                                                                                  
ttttCCAGGCCTTCCGGGCCCACGCGCTTGCCGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGc                                                                                                                                                  >  1:1222108/1‑150 (MQ=255)
ttttCCAGGCCTTCCGGGCCCACGCGCTTGCCGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGACCGCGCAAGCGCTCAGCAGACCGGCCAGc                                                                                                                                                  >  1:821114/1‑150 (MQ=255)
 tttCCAGGCCTTCCGGGCCAACGCACTGGCCGATGACCGGCGCAGTCTCTGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGCGTTGGGATCCCAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCCGCCAgga                                                                                                                                                 <  2:228167/150‑3 (MQ=255)
   tCCAGGCCTTCCGGGCCCACGCGCTTGCCGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGcatc                                                                                                                                               <  1:279877/150‑1 (MQ=255)
      aGGCCTTCCGGGCCCACGCGCTTGCCGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCatcatc                                                                                                                                            <  2:426726/150‑1 (MQ=255)
        gCCTTCCGGGCCCACGCGCTTGCCGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATcac                                                                                                                                          >  1:811090/1‑150 (MQ=255)
           ttCCGGGCCCACGCGCTTGCCGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCAtcatca                                                                                                                                           <  2:1321872/146‑1 (MQ=255)
           ttCCGGGCCCACGCGCTTGCCGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCAtcatca                                                                                                                                           >  1:1321872/1‑146 (MQ=255)
              cGGGCCCACGCGCTTGCCGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCaa                                                                                                                                    <  2:261185/150‑1 (MQ=255)
               gggCCCACGCGCTTGCCGATGACCGGCACAGTCTCAGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAAt                                                                                                                                   >  2:1422657/1‑150 (MQ=255)
                  cccACGCGCTTGCCGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGt                                                                                                                                <  1:1288564/150‑1 (MQ=255)
                   ccACGCGCTTGCCGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGtt                                                                                                                               >  1:1497118/1‑150 (MQ=255)
                    cACGCGCTTGCCGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGttt                                                                                                                              <  2:811090/150‑1 (MQ=255)
                    cACGCGCTTGCCGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGttt                                                                                                                              <  2:763194/150‑1 (MQ=255)
                     aCGCGCTTGCCGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTg                                                                                                                             >  1:1298638/1‑150 (MQ=255)
                       gcgcTTGCCGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGac                                                                                                                           <  2:1434069/150‑1 (MQ=255)
                             gCCGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAg                                                                                                                     >  1:1367898/1‑150 (MQ=255)
                              ccGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGCCATGTGTTTGACCACCAgg                                                                                                                    <  2:1222108/150‑1 (MQ=255)
                                 aTGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCa                                                                                                                 >  1:1425897/1‑150 (MQ=255)
                                       ggCACAGTCTCGGCCTGCGAGTCGGACTGATAGCAACCGCCCTGGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGAGCTGCCCGCGCAAGCACTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCt                                                                                                           <  2:678367/150‑1 (MQ=255)
                                                   gCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCa                                                                                                                 <  1:1544009/132‑1 (MQ=255)
                                                   gCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCa                                                                                                                 >  2:1544009/1‑132 (MQ=255)
                                                     cTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTGGGCATCCGAGGCCGGGCTGCCCGCGCACGCGCTCAGCAGACCGCCCACCATCATCATAGGCAATTGTTTGACCACCCGGGAACTCCCTTTGCCAAGCGCCGa                                                                                             >  1:1446843/1‑150 (MQ=255)
                                                        ccAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAgg                                                                                                                    >  1:1158068/1‑124 (MQ=255)
                                                        ccAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAgg                                                                                                                    <  2:1158068/124‑1 (MQ=255)
                                                          aGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATcaca                                                                                                                                         >  2:399921/1‑101 (MQ=255)
                                                          aGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATcaca                                                                                                                                         <  1:399921/101‑1 (MQ=255)
                                                           gTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGtcat                                                                                       <  1:657625/150‑1 (MQ=255)
                                                              ggACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAg                                                                                    <  1:152327/150‑1 (MQ=255)
                                                               gACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGAc                                                                                            >  1:1609965/1‑141 (MQ=255)
                                                               gACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGAc                                                                                            <  2:1609965/141‑1 (MQ=255)
                                                                  tGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCCAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCCTTGCCAAGCGCCGACGTCATCAGGCCt                                                                                >  1:95145/1‑150 (MQ=255)
                                                                  tGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATcac                                                                                                                                          <  1:1632806/92‑1 (MQ=255)
                                                                  tGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATcac                                                                                                                                          >  2:1632806/1‑92 (MQ=255)
                                                                  tGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCt                                                                                >  1:1039319/1‑150 (MQ=255)
                                                                    aTAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTg                                                                                                        >  2:853423/1‑124 (MQ=255)
                                                                    aTAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTg                                                                                                        <  1:853423/124‑1 (MQ=255)
                                                                    aTAGCAACCGACCTTGTGCGACTGCGCCGGGTCGTCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATAGTTTGACCACCAATGCACTCCCTTTGCCAAGCGCCGACGTCATAAGGCCttt                                                                              >  1:1503635/1‑149 (MQ=255)
                                                                     tAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTgg                                                                             >  1:832970/1‑150 (MQ=255)
                                                                      aGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGcatc                                                                                                                                               <  1:829290/83‑1 (MQ=255)
                                                                      aGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGcatc                                                                                                                                               >  2:829290/1‑83 (MQ=255)
                                                                               ccTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTc                                                                   >  2:1021291/1‑150 (MQ=255)
                                                                                cTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCATTGGCCCGCTCTTcc                                                                  <  2:1367898/150‑1 (MQ=255)
                                                                                    tgCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGaa                                                              <  2:134634/150‑1 (MQ=255)
                                                                                       gACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTg                                                           >  1:1010/1‑150 (MQ=255)
                                                                                        aCTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGc                                                          <  1:1422657/150‑1 (MQ=255)
                                                                                        aCTGCGCCGGGTCGGCATCCGAGGCCCGCCTGTCCGTGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGc                                                          <  2:428052/150‑1 (MQ=255)
                                                                                                 ggTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGCCACAGCTgg                                                 >  2:243647/1‑150 (MQ=255)
                                                                                                  gTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGCCACAGCTGGc                                                <  1:238298/150‑1 (MQ=255)
                                                                                                        aTCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCtt                                                                                                          <  1:1380269/86‑1 (MQ=255)
                                                                                                        aTCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCtt                                                                                                          >  2:1380269/1‑86 (MQ=255)
                                                                                                        aTCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGCCACAGCTGGCAGGAcc                                          <  2:1298638/150‑1 (MQ=255)
                                                                                                             aGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGCCACAGCTGGCAGGACCTTGcc                                     <  2:1010/150‑1 (MQ=255)
                                                                                                             aGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGCCACAGCTGGCAGGACCTTGcc                                     <  2:1425897/150‑1 (MQ=255)
                                                                                                               GCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCACGCGcc                                                                                               >  2:843498‑M1/1‑90 (MQ=255)
                                                                                                               GCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGcc                                                                                               <  1:843498‑M1/90‑1 (MQ=255)
                                                                                                                 cggtctgctgagcgcttgcgcgggcagcccggccAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGc                                                                            <  2:519406‑M2/73‑1 (MQ=255)
                                                                                                                 cggtctgctgagcgcttgcgcgggcagcccggccAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGc                                                                            >  1:519406‑M2/35‑107 (MQ=255)
                                                                                                                        ctgagcgcttgcgcgggcagcccggccAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGc                                                                                                       <  2:779444‑M2/46‑1 (MQ=255)
                                                                                                                        ctgagcgcttgcgcgggcagcccggccAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGc                                                                                                       >  1:779444‑M2/28‑73 (MQ=255)
                                                                                                                         ccGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGCCACAGCTGGc                                                <  2:124403/127‑1 (MQ=255)
                                                                                                                         ccGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGCCACAGCTGGc                                                >  1:124403/1‑127 (MQ=255)
                                                                                                                               aaGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGCCACAGCTGGCAGGACCTTGCCCTCGACGAACTCGAGGaa                   >  2:1357147/1‑150 (MQ=255)
                                                                                                                               aaGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATAGCCACAGCTGGCAGGACCTTGCCCTCGACGAACTCGAGGaa                   >  1:676929/1‑150 (MQ=255)
                                                                                                                                aGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGCCACAGCTGGCAGGACCTTGCCCTCGACGAACTCGAGGAAg                  <  2:1225034/150‑1 (MQ=255)
                                                                                                                                 gcgcTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCACGCTCTTCCAGAATTGCCACAGCTGGCAGGACCTTGCCCTCGACGAACTCGAGGAAgg                 >  2:1040884/1‑150 (MQ=255)
                                                                                                                                  cgcTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGCCACAGCTGGCAGGACCTTGCCCTCGACGAACTCGAGGAAGgc                <  2:821114/150‑1 (MQ=255)
                                                                                                                                   gcTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGCCACAGCTGGCAGGACCTTGCCCTCGACGAACTCGAGGAAGgcg               >  1:1113931/1‑150 (MQ=255)
                                                                                                                                   gcTCAGCAGACCGGCCAGCATCATCAAAGGCAATTGTTTGACCACCAGGGAACTACCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGCCACAGCTGGCAGGACCTCGCCCTCGACGAACTAGAGGAAGgcg               >  1:2769/1‑150 (MQ=255)
                                                                                                                                     tCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGCCACAGCTGGCAGGACCTTGCCCTCGACGAAc                           <  1:1497752/136‑1 (MQ=255)
                                                                                                                                     tCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGCCACAGCTGGCAGGACCTTGCCCTCGACGAAc                           >  2:1497752/1‑136 (MQ=255)
                                                                                                                                     tCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGCCACAGCTGGCAGGACCTTGCCCTCGACGAACTCGAGGAAGGCGcc             >  1:1234809/1‑150 (MQ=255)
                                                                                                                                     tCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGCCACAGCTGGCAGGACCTTGCCCTCGACGAACTCGAGGAAGGCGcc             <  1:1489309/150‑1 (MQ=255)
                                                                                                                                        gcagACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGTGCACTCTGTTTGACAAGCGAAGAGGACATCAGGCATTGTCCCGTTCTTCCGGAATTGCTCCAGCTGGTACGACATTGCCCTCGACGACATCGAGGACGGTGccacc          >  2:684896/1‑150 (MQ=255)
                                                                                                                                        gcagACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGCCACAGCTGGCAg                                              <  2:1419138/114‑1 (MQ=255)
                                                                                                                                        gcagACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGCCACAGCTGGCAg                                              >  1:1419138/1‑114 (MQ=255)
                                                                                                                                            aCCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGCCACAGCTGGCAGGACCTTGCCCTCGACGAACTCGAGGAAGGCGCCACCACCg      <  1:243647/150‑1 (MQ=255)
                                                                                                                                            aCCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGCCACAGCTGGCAGGACCTTGCCCTCGACGAACTCGAGGAAGGCGCCACCACCg      <  1:1040884/150‑1 (MQ=255)
                                                                                                                                              cggccAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGCCACAGCTGGCAGGACCTTGCCCTCGACGAACTCGAGGAAGGCGCCACCACCGGt    >  2:320777‑M2/6‑150 (MQ=255)
                                                                                                                                               ggccAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGCCACAGCTGGCAGGACCTTGCCCTCGACGAACTCGAGGAAGGCGCCACCACCGGTa   <  2:1113931‑M2/146‑1 (MQ=255)
                                                                                                                                                gccAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGCCACACCTGGCAGGACCTTGCCCTCGACGAACTCGAGgaaggcgccaccagatcgga  >  1:766853‑M2/4‑143 (MQ=255)
                                                                                                                                                   |                                                                                                                                                  
TTTTCCAGGCCTTCCGGGCCCACGCGCTTGCCGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGCCACAGCTGGCAGGACCTTGCCCTCGACGAACTCGAGGAAGGCGCCACCACCGGTAG  >  NC_002947/5653154‑5653447

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.