| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 414024 | 54 (1.070) | 10 (0.250) | 9/210 | 3.4 | 18.2% | intergenic (+41/‑162) | glnE/waaF | glutamate‑ammonia‑ligase adenylyltransferase/ADP‑heptose:LPS heptosyltransferase II |
| ? | NC_002947 | = 414054 | 47 (1.170) | intergenic (+71/‑132) | glnE/waaF | glutamate‑ammonia‑ligase adenylyltransferase/ADP‑heptose:LPS heptosyltransferase II | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TACAAAGCGTTCCGCTCGGCCTCCCACCGCCAGGCCCTGCAGAAGGAGGCCGGGGTGATCGATGCGGCACAGTTTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/413855‑414024‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tattcgcgggcaagcccgctcccacaggGATTGCACACTGCTCAGGGCCTGTGCAGTACCTGTGGGAGCGGGCTTGCCCGCGAATAAGCCAACACGGTATCAGCTTAAACCCAACTCACCCCAGATCCGCCGCACTTCACGGCGTTCATCGGCAAACTGTGCCGCATCGATCACC < NC_002947/414054‑413908 TACAAAGCGTTCCGCTCGGCCTCCCACCGCCAGGCCCTGCAGAAGGAGGCCGGGGTGATCGATGCGGCACAGTTTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCG > 1:651496/1‑150 TTCCGCTCGGCCTCCCACCGCCAGGCCCTGCAGAAGGAGGCCGGGGTGATCGATGCGGCACAGTTTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCC < 2:494713/150‑1 GCTCGGCCTCCCACCGCCAGGCCCTGCAGAAGGAGGCCGGGGTGATCGATGCGGCACAGTTTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTC > 1:842608/1‑150 CGGCCTCCCACCGCCACGCCCTGCAGAAGGAGGCCGGGGTGATCGATGCGGCACAGTTTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCA < 1:598842/150‑1 GGCCTCCCACCGCCAGGCCCTGCAGAAGGAGGCCGGGGTGATCGATGCGGCACAGTTTGCCGATGAACGCCGTGAACTGCGGCGGATCTGGGGCCTGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCTTGCCCGCgaataa < 1:156058/150‑7 CCTCCCACCGCCAGGCCCTGCAGAAGGAGGCCGGGGTGATCGATGCGGCACAGTTTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAG < 2:846187/150‑1 CCTCCCACCGCCAGGCCCTGCAGAAGGAGGCCGGGGTGATCGATGCGGCACAGTTTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAG > 2:456488/1‑150 CCTCCCACCGCCAGGCCCTGCAGAAGGAGGCCGGGGTGATCGATGCGGCACAGTTTGCCGATGAACGCCGCGCACTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAG < 1:154232/150‑1 ACCGCCAGGCCCTGCAGAAGGAGGCCGGGGTGATCGATGCGGCACAGTTTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGG < 2:882043/126‑1 ACCGCCAGGCCCTGCAGAAGGAGGCCGGGGTGATCGATGCGGCACAGTTTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGG > 1:882043/1‑126 GCAGAAGGAGGCCGGGGTGATAGATGCGGCACAGTTTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGGATTGCACACTGCTCAGG > 1:498767/1‑150 CCGGGGTGATCGATGCGGCACAGTTTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACACTGCTCAGGGCCTGTGCAGT < 1:242454/150‑1 CGGGGTGATCGATGCGGCACAGTTTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCGGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGG‑‑‑‑‑‑‑CACTGCTCAGGGCCTGTGCAGTACCTGTGG < 1:295747/150‑1 GGGGTGATAGATGCGGCACAGTTTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGGATTGCACACTGCTCAGGGCCTGTGCAGTAC < 2:498767/150‑1 TGATCGATGCGGCACAGTTTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGGATTGCACACTGCTCAGGGCCTGTGCAGTACCTGT < 1:69620/150‑1 ATCGATGCGGCACAGTTTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGACACCGTGTTGGCCTATTCGCGGGCAAGCCCGCTCCCACAGGGATTGCACACTGCTCAGGGCCTGTGCAGTACCTGTGG < 1:153864/150‑1 ctGGCACAGTTTGCCGATGAACGCCGTGAAGTGCGGCGGATATCGCCGATGCTGCCCTCAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGGATTGCACACTGCTCAGGGCCTGTGCAGTACCTGTGGGAGCGG < 2:667832/148‑1 GCACAGTTTGCCGATGAACGCCGTCGTCAAGGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGGATTGCACACTGCTCAGGGCCTGTGCAGTACCTGTGGGAGCGGGag > 1:667832/1‑148 TTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGGATTGCACACTGCTCAGGGCCTGTGCAGTACCT > 1:460823/1‑89 TTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGGATTGCACACTGCTCAGGGCCTGTGCAGTACCT < 2:460823/89‑1 CCCGCTCCCACAGGGATTGCACACTGCTCAGGGCCTGTGCAGTACCTGTGGGAGCGGGCTTGCCCGCGAATAAGCCAACACGGTATCAGCTTAAACCCAACTCACCCCAGATCCGCCGCACGTCACGGCGTTCATCGGCAAACTGTGCCG > 2:1112764/1‑150 CCGCTCCCACAGGGATTGCACACTGCTCAGGGCCTGTGCAGTACCTGTGGGAGCGGGCTTGCCCGCGAATAAGCCAACACGGTATCAGCTTAAACCCAACTCACCCCAGATCCGCCGCACTTCACGGCGTTCATCGGCAAACTGTGCCGC > 1:456488/1‑150 CCGCTCCCACAGGGATTGCACACTGCTCAGGGCCTGTGCAGTACCTGTGGGAGCGGGCTTGCCCGCGAATAAGCCAACACGGTATCAGCTTAAACCCAACTCACCCCAGATCCGCCGCACTTCACGGCGTTCATCGGCAAACTGTGCC < 1:675325/148‑1 CCGCTCCCACAGGGATTGCACACTGCTCAGGGCCTGTGCAGTACCTGTGGGAGCGGGCTTGCCCGCGAATAAGCCAACACGGTATCAGCTTAAACCCAACTCACCCCAGATCCGCCGCACTTCACGGCGTTCATCGGCAAACTGTGCC > 2:675325/1‑148 TCCCACAGGGATTGCACACTGCTCAGGGCCTGTGCAGTACCTGTGGGAGCGGGCTTGCCCGCGAATAAGCCAACACGGTATCAGCTTAAACCCAACTCACCCCAGATCCGCCGCACTTCACGGCGTTCATCGGCAAACTGTGCCGCATCG > 1:175084/1‑150 CCACAGGGATTGCACACTGCTCAGGGCCTGTGCAGTACCTGTGGGAGCGGGCTTGCCCGCGAATAAGCCAACACGGTATCAGCTTAAACCCAACTCACCCCAGATCCGCCGCACTTCACGGCGTTCATCGGCAAACTGTGCCGCATCGAT > 1:316388/1‑150 CCACAGGGATTGCACACTGCTCAGGGCCTGTGCAGTACCTGTGGGAGCGGGCTTGCCCGCGAATAAGCCAACACGGTATCAGCTTAAACCCAACTCACCCCAGATCAGCCGCACTTCACGGCGTTCATCGGCAAACTGTGCCGCATCGAT > 1:645580/1‑150 AGGGATTGCACACTGCTCAGGGCCTGTGCAGTACCTGTGGGAGCGGGCTTGCCCGCGAATAAGCCAACACGGTATCAGCTTAAACCCAACTCACCCCAGATCCGCCGCACTTCACGGCGTTCATCGGCAAACTGTGCCGCATCGATCACC > 2:351026/1‑150 TACAAAGCGTTCCGCTCGGCCTCCCACCGCCAGGCCCTGCAGAAGGAGGCCGGGGTGATCGATGCGGCACAGTTTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/413855‑414024‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tattcgcgggcaagcccgctcccacaggGATTGCACACTGCTCAGGGCCTGTGCAGTACCTGTGGGAGCGGGCTTGCCCGCGAATAAGCCAACACGGTATCAGCTTAAACCCAACTCACCCCAGATCCGCCGCACTTCACGGCGTTCATCGGCAAACTGTGCCGCATCGATCACC < NC_002947/414054‑413908 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |