New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 123578 = | 110 (1.250) | 7 (0.080) | 6/236 | NT | 6.6% | coding (290/783 nt) | znuB | zinc ABC transporter permease |
? | NC_002947 | 123598 = | 93 (1.110) | coding (270/783 nt) | znuB | zinc ABC transporter permease |
CTTGGGCTTTGCCCTGGATGTCAGCCCCGCACTGGCGGTAACCGTGGGCTGCCTGTTGCTGGCGATTCTGCTGGTGACATTGCAGCAACGCCAGCCGCTGGCCTCCGACACCCTCCTGGGTATCCTGGCCCCCAGCACCTTGTCGCTGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/123727‑123578 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgggGGCCAGGATACCCAGGAGGGTGTCGGAGGCCAGCGGCTGGCGTTGCTGCAATGTCACCAGCAGAATCGCCAGCAACAGGCAGCCCACGGTTACCGCCAGTGCGGGGCTGACATCCAGGGCAAAGC > NC_002947/123598‑123722 CTTGGGCTTTGCCCTGGATGTCAGCCCCGCACTGGCGGTAACCGTGGGCCGCCTGTTGCTGGCGATTCTGCTGGTGACATTGCAGCAACGCCAGCCGCTGGCCTCCGACACCCTCCTGGGTATCCTGGCCCCCAGCACCTTGTCGCTGGG > 2:1805314/1‑150 CTGGCCCCCAGCACCTTGTCGCTGGGGGCCAGGATACCCAGGAGGGTGTCGGAGGCCAGCGGCTGGCGTTGCTGCAATGTCACCAGCA < 1:1004976/88‑1 CTGGCCCCCAGCACCTTGTCGCTGGGGGCCAGGATACCCAGGAGGGTGTCGGAGGCCAGCGGCTGGCGTTGCTGCAATGTCACCAGCA > 2:1004976/1‑88 TGGCCCCCAGCACCTTGTCGCTGGGGGCCAGGATACCCAGGAGGGTGTCGGAGGCCAGCGGCTGGCGTTGCTGCAATGTCACCAGCAGAATCGCCAGCAACAGGCAGCCCACGGTTACCGCCAGTGCGGGGCTGACATCCAGGGCAAAGC > 1:1218603/1‑150 TGGCCCCCAGCACCTTGTCGCTGGGGGCCAGGATACCCAGGAGGGTGTCGGAGGCCAGCGGCTGGCGTTGCT < 1:578109/72‑1 TGGCCCCCAGCACCTTGTCGCTGGGGGCCAGGATACCCAGGAGGGTGTCGGAGGCCAGCGGCTGGCGTTGCT > 2:578109/1‑72 CCCCAGCACCTTGTCGCTGGGGGCCAGGATACCCAGGAGGGTGTCGGAGGCCAGCGGCTGGCGTTGCTGCAATGTCACCAGCAGAATCGCCAGCAACAGGCAGCCCAC > 1:1873056/1‑108 CCCCAGCACCTTGTCGCTGGGGGCCAGGATACCCAGGAGGGTGTCGGAGGCCAGCGGCTGGCGTTGCTGCAATGTCACCAGCAGAATCGCCAGCAACAGGCAGCCCAC < 2:1873056/108‑1 CTTGGGCTTTGCCCTGGATGTCAGCCCCGCACTGGCGGTAACCGTGGGCTGCCTGTTGCTGGCGATTCTGCTGGTGACATTGCAGCAACGCCAGCCGCTGGCCTCCGACACCCTCCTGGGTATCCTGGCCCCCAGCACCTTGTCGCTGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/123727‑123578 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgggGGCCAGGATACCCAGGAGGGTGTCGGAGGCCAGCGGCTGGCGTTGCTGCAATGTCACCAGCAGAATCGCCAGCAACAGGCAGCCCACGGTTACCGCCAGTGCGGGGCTGACATCCAGGGCAAAGC > NC_002947/123598‑123722 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |