New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 195222 = | 95 (1.080) | 5 (0.060) | 5/230 | NT | 5.8% | coding (728/26049 nt) | PP_0168 | putative surface adhesion protein |
? | NC_002947 | 195247 = | 74 (0.900) | coding (753/26049 nt) | PP_0168 | putative surface adhesion protein |
CTTCGGTCACGCTTGGCGAGGCGGTCAGGGTCGCGGTTGTAGTGTCGATTGTATCGGTCACTTGGGTAACCGCTGGCGTTTGCGGCAATGTCACCGTCAGCCCGCCACCACCGGTACTACCTGTCACGGTGGCCGAAATCT‑GGCCACCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/195371‑195222 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccaccgtGACAGGTAGTACCGGTGGTGGCGGGCTGACGGTGACATTGCCGCAAACGCCAGCGGTTACCCAAGTGACCGATACAATCGACACTACAACCGCGACCCTGACCGCCTCGCCAAGCGTGACCGAAGGTGGCGTGATCACCTACACCGT > NC_002947/195247‑195393 CTTCGGTCACGCTTGGCGAGGCGGTCAGGGTCGCGGTTGTAGTGTCGATTGTATCGGTCACTTGGGTAACCGCTGGCGTTTGCGGCAATGTCACCGTCAGCCCGCCACCACCGGTACTACCTGTCACGGTGGCCGAAATCT‑GGCCACCGT > 1:535072/1‑150 TTGTATCGGTCACTTGGGTAACCGCTGGCGTTTGCGGCAATGTCACCGTCAGCCCGCCACCACCGGTACTACCTGTCACGGTGGCC‑AGATTTCGGCCACCGTGACAGGTAGTACCGGTGGTG < 1:537409/122‑1 TTGTATCGGTCACTTGGGTAACCGCTGGCGTTTGCGGCAATGTCACCGTCAGCCCGCCACCACCGGTACTACCTGTCACGGTGGCC‑AGATTTCGGCCACCGTGACAGGTAGTACCGGTGGTG > 2:537409/1‑122 GGTAACCGCTGGCGTTTGCGGCAATGTCACCGTCAGTCCGCCACCACCGGTACTACCTGTCACGGTGGCCAGATTTC‑GGCCACCGTGACAGGTAGTACCGGT > 2:514301/1‑102 GGTAACCGCTGGCGTTTGCGGCAATGTCACCGTCAGTCCGCCACCACCGGTACTACCTGTCACGGTGGCC‑AGATTTCGGCCACCGTGACAGGTAGTACCGGT < 1:514301/102‑1 GGTGGCCGAAATCT‑GGCCACCGTGACAGGTAGTACCGGTGGTGGCGGGCTGACGGTGACATTGCCGCAAACGCCAGCGGTTACCCAAGTGACCGATACAGGCGACACTACAACCGCGACCCTGACCGCCTCGCCAAGCGTGACCGAAGGT > 1:2260441/1‑150 GGCCACCGTGACAGGTAGTACCGGTGGTGGCGGGCTGACGGTGACATTGCCGCAAACGCCAGCGGTTACCCAAGTGACCGATACAATCGACACTACAACCGCGACCCTGACCGCCTCGCCAAGCGTGACCGAAGGTGGCGTGATCACCTA < 1:596028/150‑1 GGCCACCGTGACAGGTAGTACCGGTGGTGGCGGGCTGACGGTGACATTGCCGCAAACGCCAGCGGTTACCCAAGTGACCGATACAATCGACACTACAACCGCGACCCTGACCGCCTCGC < 1:781921/119‑1 GGCCACCGTGACAGGTAGTACCGGTGGTGGCGGGCTGACGGTGACATTGCCGCAAACGCCAGCGGTTACCCAAGTGACCGATACAATCGACACTACAACCGCGACCCTGACCGCCTCGC > 2:781921/1‑119 GGCCACCGTGACAGGTAGTACCGGTGGTGGCGGGCTGACGGTGACATTGCCGAAAACGCCAGCGGTTACCCAAGTGACCGATACAATCGACACTACAACCGCGACCCTGACCGCCTCGCCAAGCGTGACCGAAGGTGGCGTGATCACCTA > 2:1108254/1‑150 GCCACCGTGACAGGTAGTACCGGTGGTGGCGGGCTGACGGTGACATTGCCGCAAACGCCAGCGGTTACCCAAGTGACCGATACAATCGACACTACAACCGCGACCCTGANCGCNTCGCCANGCGTGACCGANGGTGGCGTGATCACCTAC > 2:1889303/1‑150 GCCACCGTGACAGGTAGTACCGGTGGTGGCGGGCTGACGGTGACATTGCCGCAAACGCCAGCGGTTACCCAAGTGACCGATACAATCGACACTACAACCGCGACCCTGACCGCCTCGCCAAGCGTGACCGAAGGTGGCGTGATCACCTAC > 1:2120170/1‑150 CCACCGTGACAGGTAGTACCGGTGGTGGCGGGCTGACGGTGACATTGCCGCAAACGCCAGCGGTTACCCAAGTGACCGATACAATCGACACTACAACCGCGACCCTGACCGCCTCGCCAAGCGTGACCGAAGGTGGCGTGATCACCTACA < 2:1629795/150‑1 CCGTGACAGGTAGTACCGGTGGTGGCGGGCTGACGGTGACATTGCCGCAAACGCCAGCGGTTACCCAAGTGACCGATACAATCGACACTACAACCGCGACCCTGACCGCCTCGCCAAGAGTGACCTAAGGTGGCGTGATCACCTACACCG > 1:2428/1‑150 CGTGACAGGTAGTACCGGTGGTGGCGGGCTGACGGTGACATTGCCGCAAACGCCAGCGGTTACCCAAGTGACCGATACAATCGACACTACAACCGCGACCCTGACCGCCTCGCCAAGCGTGACCGAAGGTGGCGTGATCACCTACACCGT > 2:2034679/1‑150 CTTCGGTCACGCTTGGCGAGGCGGTCAGGGTCGCGGTTGTAGTGTCGATTGTATCGGTCACTTGGGTAACCGCTGGCGTTTGCGGCAATGTCACCGTCAGCCCGCCACCACCGGTACTACCTGTCACGGTGGCCGAAATCT‑GGCCACCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/195371‑195222 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccaccgtGACAGGTAGTACCGGTGGTGGCGGGCTGACGGTGACATTGCCGCAAACGCCAGCGGTTACCCAAGTGACCGATACAATCGACACTACAACCGCGACCCTGACCGCCTCGCCAAGCGTGACCGAAGGTGGCGTGATCACCTACACCGT > NC_002947/195247‑195393 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |