| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 295713 | 131 (1.480) | 8 (0.100) | 8/220 | NT | 5.8% | intergenic (+60/+82) | PP_0241/PP_0242 | transporter/TetR family transcriptional regulator |
| ? | NC_002947 | = 295744 | 144 (1.840) | intergenic (+91/+51) | PP_0241/PP_0242 | transporter/TetR family transcriptional regulator | |||||
TCGGTGATTACCACCCGTTCCGTGCGGGAGCTGGAGTTGCAGGTGGGCAGTGAAGTGATTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/295552‑295713‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgctcccacagAGCCCGCGCGCACCCTGGAGCTTGCGAGTACCTGTGGGAGCGGGCGTGCCGGCGAAGGGCTGCAAAGCAGCCCCAATATCGACCCGCCGCATCACAGCTTGGCGATAGACACTTCGGTCGACTTCACAAAGGCAATCACTTCACTGC < NC_002947/295744‑295598 TCGGTGATTACCACCCGTTCCGTGCGGGAGCTGGAGTTGCAGGTGGGCAGTGAAGTGATTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGC < 2:2046343/150‑1 CGGTGATTACCACCCGTTCCGTGCGGGAGCTGGAGTTGCAGGTGGGCAGTGAAGTGATTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCC > 1:290434/1‑150 TGATTACCACCCGTTCCGTGCGGGAGCTGGAGTTGCAGGTGGGCAGTGAAGTGATTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGC > 2:1013159/1‑150 ATTACCACCCGTTCCGTGCGGGAGCTGGAGTTGCAGGTGGGCAGTGAAGTGATTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTC > 1:1369949/1‑150 ATTACCACCCGTTCCGTGCGGGAGCTGGAGTTGCAGGTGGGCAGTGAAGTGATTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTC > 1:1428996/1‑150 CCACCCGTTCCGTGCGGGAGCTGGAGTTGCAGGTGGGCAGTGAAGTGATTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCAC > 2:1874424/1‑150 CACCCGTTCCGTGCGGGAGCTGGAGTTGCAGGTGGGCAGTGAAGTGATTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGTGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACA < 2:2025227/150‑1 ACCCGTTCCGTGCGGGAGCTGGAGTTGCAGGTGGGCAGTGAAGTGATTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAG < 1:1383509/150‑1 GGAGCTGGAGTTGCAGGTGGGCAGTGAAGTGATTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCC < 1:480036/126‑1 GGAGCTGGAGTTGCAGGTGGGCAGTGAAGTGATTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCC > 2:480036/1‑126 TGGGCAGTGAAGTGATTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGAGCCCGCGCGCACCCTGGAGCTTGCGAGTAC < 2:1369949/150‑1 CAGTGAAGTGATTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGAGCCCGCGCGCACCCTGGAGCTTGCGAGTACCTGT < 2:1428996/150‑1 TGAAGTGATTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGAGCCCGCGCGCACCCTGGAGCTTGCGAGTACCTGTGGG > 2:2216344/1‑150 GAAGTGATTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGAGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGAGCCCGCGCGCACCCTGGGGCTTGCGAGTACCTGTGGGA < 2:697480/150‑1 TGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGAGCCCGCGCGCACCCTGGAGCTTGCGAGTACCTGTGGGAGCGGGCGT < 1:2216344/150‑1 GAAGTCGACCGAAGTGTCTATCGCCCAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCAAGCCCGCTCCCACAGAGCCCGCGCGCACCCTGGAGCTTGCGAGTACCTGTGGGAGCGGGCGTGCCGGCGAA < 1:705527/150‑1 CCAAGCTGTGATGCAGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCA < 2:1391112/68‑1 CCAAGCTGTGATGCAGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCA > 1:1391112/1‑68 CTTTGCAGCCCTTCGCCGGCAAGCCCGCTCCCACAGAGCCCGCGCGCACCCTGGAGCTTGCGAGTACCTGTGGGAGC < 2:1775676/77‑1 CTTTGCAGCCCTTCGCCGGCAAGCCCGCTCCCACAGAGCCCGCGCGCACCCTGGAGCTTGCGAGTACCTGTGGGAGC > 1:1775676/1‑77 CCGCTCCCACAGAGCCCGCGCGCACCCTGGAGCTTGCGAGTACCTGTGGGAGCGGGCGTGCCGGCGAAGGGCTGCAAAGCAGCCCCAATATCGACCCGCCGCATCACAGCTTGGCGATAGACACTTCGGTCGACTTCACAAAGGCAATCA > 1:295604/1‑150 CCGCTCCCACAGAGCCCGCGCGCACCCTGGAGCTTGCGAGTACCCGTGGGAGCGGGCGTGCCGGCGAAG > 2:2334916/1‑69 CGCTCCCACAGAGCCCGCGCGCACCCTGGAGCTTGCGAGTACCTGTGGGAGCGGGCGTGCCGGCGAAGGGCTGCAAAGCAGCCCCAATATCGACCCGCCGCATCACAGCTTGGCGATAGACACTTCGGTCGACTTCACAAAGGCAATCAC > 1:1799540/1‑150 TCCCACAGAGCCCGCGCGCACCCTGGAGCTTGCGAGTACCTGTGGGAGCGGGCGTGCCGGCGAAGGGCTGCAAAGCAGCCCCAATATCGACCCGCCGCATCACAGCTTGGCGATAGACACTTCGGTCGACTTCACAAAGGCAATCACTTC > 2:290473/1‑150 ACAGAGCCCGCGCGCACCCTGGAGCTTGCGAGTAC > 1:966947/1‑35 ACAGAGCCCGCGCGCACCCTGGAGCTTGCGAGTAC < 2:966947/35‑1 CAGGGCCCGCGCGCACCCTGCAGCTTGCGAGTACCTGTGGGAGCGGGCGTGCCGGCGAAGGGCTGCAAAGCAGCCCCAATATCGACCCGCCGCATCACAGCTTGGCGATAGACACTTCGGTCGACTTCACAAAGGCAATCACTTCACTGC < 1:2104659/150‑1 TCGGTGATTACCACCCGTTCCGTGCGGGAGCTGGAGTTGCAGGTGGGCAGTGAAGTGATTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/295552‑295713‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgctcccacagAGCCCGCGCGCACCCTGGAGCTTGCGAGTACCTGTGGGAGCGGGCGTGCCGGCGAAGGGCTGCAAAGCAGCCCCAATATCGACCCGCCGCATCACAGCTTGGCGATAGACACTTCGGTCGACTTCACAAAGGCAATCACTTCACTGC < NC_002947/295744‑295598 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |