| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 603652 = | 88 (1.000) | 6 (0.070) | 6/230 | NT | 7.1% | intergenic (+45/‑47) | ribAB‑I/ribH | bifunctional 3,4‑dihydroxy‑2‑butanone 4‑phosphate synthase/GTP cyclohydrolase II/6,7‑dimethyl‑8‑ribityllumazine synthase |
| ? | NC_002947 | 603676 = | 75 (0.920) | intergenic (+69/‑23) | ribAB‑I/ribH | bifunctional 3,4‑dihydroxy‑2‑butanone 4‑phosphate synthase/GTP cyclohydrolase II/6,7‑dimethyl‑8‑ribityllumazine synthase | |||||
ACGGCACCGCTTACCAGGCTTTCGACAACGAAGCTGTTGAAGCGGCCAACCACCAAAGCATAGCGACCTTTGGGGGCGATGAAGGTACCTTCGATGGTCTTCAGGGTCATTCCGATATTCTCATCTTCAAGAGCGAGGCCGCATACAAGCGGCCTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/603808‑603652‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggcctcgCTCTTGAAGATGAGAATATCGGAATGACCCTGAAGACCATCGAAGGTACCTTCATCGCCCCCAAAGGTCGCTATGCTTTGGTGGTTGGCCGCTTCAACAGCTTCGTTGTCGAAAGCCTGGTAAGCGGTGCCGTTGATGCCCTGGTA > NC_002947/603676‑603821 ACGGCACCGCTTACCAGGCTTTCGACAACGAAGCTGTTGAAGCGGCCAACCACCAAAGCATAGCGACCTTTGGGGGCGATGAAGGTACCTTCGATGGTCTTCAGGGTCATTCCGATATTCTCATCTTCAAGAGCGAGGCCGCATACAAGC < 1:1798939/150‑1ACGGCACCGCTTACCAGGCTTTCGACAACGAAGCTGTTGAAGCGGCCAACCACCAAAGCATAGCGACCTTTGGGGGCGATGAAGGTACCTTCGATGGTCTTCAGGGTCATTCCGATATTCTCATCTTCAAGAGCGAGGCCGCATACAAGC < 2:1621801/150‑1 CGGCACCGCTTACCAGGCTTTCGACAACGAAGCTGTTGAAGCGGCCAACCACCAAAGCATAGCGACCTTTGGGGGCGATGAAGGTACCTTCGATGGTCTTCAGGGTCATTCCGATATTCTCATCTTCAAGAGCGAGGCCGCATACAAGCG < 2:1984628/150‑1 CGCTTACCAGGCTTTCGACAACGAAGCTGTTGAAGCGGCCAACCACCAAAGCATAGCGACCTTTGGGGGCGATGAAGGTACCTTCGATGGTCTTCAGGGTCATTCCGATATTCTCATCTTCAAGAGCGAGGCCGCATACAAGCGGCCTCG > 1:1979456/1‑150 GATGAAGGTACCTTCGATGGTCTTCAGGGTCATTCCGATATTCTCATCTTCAAGAGCGAGGCCGCTTGTATGCGGCCTCGCTCTTGAA < 1:981987/88‑1 GATGAAGGTACCTTCGATGGTCTTCAGGGTCATTCCGATATTCTCATCTTCAAGAGCGAGGCCGCTTGTATGCGGCCTCGCTCTTGAA > 2:981987/1‑88 GAGGCCGCATACAAGCGGCCTCGCTCTTGAAGATGAGAATATCG > 1:1788980/1‑44 GAGGCCGCATACAAGCGGCCTCGCTCTTGAAGATGAGAATATCG < 2:1788980/44‑1 GGCCGCATACAAGCGGCCTCGCTCTTGAAGATGAGAATATCGGAATGACCCTGAAGACCATCGAAGGTACCTTCATCGCCCCCAAAGGTCGCTATGCTTTG < 1:2032789/101‑1 GGCCGCATACAAGCGGCCTCGCTCTTGAAGATGAGAATATCGGAATGACCCTGAAGACCATCGAAGGTACCTTCATCGCCCCCAAAGGTCGCTATGCTTTG > 2:2032789/1‑101 CGGCCTCGCTCTTGAAGATGAGAATATCGGAATGACCCTGAAGACCATCGAAGGTACCTTCATCGCCCCCAAAGGTCGCTATGCTTTGGTGGTTGGCCGCTTCAACAGCTTCGTTGTCGAAAGCCTGGTAAGCGGTGCCGTTGATGCCCT < 1:1828238/150‑1 GCCTCGCTCTTGAAGATGAGAATATCGGAATGACCCTGAAGACCATCGAAGGTACCTTCATCGCCCCCAAAGGTCGCTATGCTTTGGTGGTTGGCCGCTTCAACAGCTTCGTTGTCGAAAGCCTGGTAAGCGGTGCCGTTGATGCCCTGG < 2:1994235/150‑1 CTCGCTCTTGAAGATGAGAATATCGGAATGACCCTGAAGACCATCGAAGGTACCTTCATCGCCCCCAAAGGTCGCTATGCTTTGGTGGTTGGCCGCTTCAACAGCTTCGTTGTCGAAAGCCTGGTAAGCGGTGCCGTTGATGCCCTGGTA > 1:482256/1‑150 ACGGCACCGCTTACCAGGCTTTCGACAACGAAGCTGTTGAAGCGGCCAACCACCAAAGCATAGCGACCTTTGGGGGCGATGAAGGTACCTTCGATGGTCTTCAGGGTCATTCCGATATTCTCATCTTCAAGAGCGAGGCCGCATACAAGCGGCCTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/603808‑603652‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggcctcgCTCTTGAAGATGAGAATATCGGAATGACCCTGAAGACCATCGAAGGTACCTTCATCGCCCCCAAAGGTCGCTATGCTTTGGTGGTTGGCCGCTTCAACAGCTTCGTTGTCGAAAGCCTGGTAAGCGGTGCCGTTGATGCCCTGGTA > NC_002947/603676‑603821 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |