| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1022665 = | 85 (0.960) | 4 (0.050) | 4/230 | NT | 5.1% | coding (1051/1635 nt) | dppA‑I | dipeptide ABC transporter substrate‑binding protein |
| ? | NC_002947 | 1022695 = | 71 (0.870) | coding (1021/1635 nt) | dppA‑I | dipeptide ABC transporter substrate‑binding protein | |||||
GGTCACCGGCTACATCGCCATGAATACCCAGCACAAATACCTCAACGACGTGCGCGTGCGTAAAGCCATCAACATGGCCTTCGACCGCCAGACCCATGTCGACCAACTGTTTGGCAAAGGCAACGCACTGGTGGGT‑‑GTAAACCCTTACCCACCCACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1022822‑1022665‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacccaccaGTGCGTTGCCTTTGCCAAACAGTTGGTCGACATGGGTCTGGCGGTCGAAGGCCATGTTGATGGCTTTACGCACGCGCACGTCGTTGAGGTATTTGTGCTGGGTATTCATGGCGATGTAGCCGGTGACCAGGGCCTCGATTTCTTCAACC > NC_002947/1022695‑1022843 GGTCACCGGCTACATCGCCATGAATACCCAGCACAAATACCTCAACGACGTGCGCGTGCGTAAAGCCATCAACATGGCCTTCGACCGCCAGACCCATGTCGACCAACTGTTTGGCAAAGGCAACGCACTGGGGGGT‑‑GTAAACCCTTACCC > 1:1286991/1‑150 GTCACGGGCTACACCGCCATGAATACCCAGCACAAATACCTCAACGACGTGCGCGTGCTTAAAGCCATCAACATGGCCTTCGACCGCCAGCCCCATGTCGACCAACTGTTTGGCAAAGGCAACGCACTGGTGGGT‑‑GTAAACCCTTACCCA < 2:1032222/150‑1 CGGCTACATCGCCATGAATACCCAGCACAAATACCTCAACGACGTGCGCGTGCGTAAAGCCATCAACATGGCCTTCGACCGCCAGACCCATGTCGACCAACTGTTTGGCAAAGGCAACGCACTGGTGGGT‑‑GTAAACCCTTACCCACCCAC < 2:588551/150‑1 CGGCTACATCGCCATGAATACCCAGCACAAATACCTCAACGACGTGCGCGTGCGTAAAGCCATCAACATGGCCTTCGACCGCCAGACCCATGTCGACCAACTGTTTGGCAAAGGCAACGCACTGGTGACT‑‑CTAAACCCTTACCCACCCAC > 2:762748/1‑150 GCTACATCGCCATGAATACCCAGCACAAATACCTCAACGACGTGCGCGTGCGTAAAGCCATCAACATGGCCTTCGACCGCCAGACCCATGTCGACCAACTGTTTGGCAAAGGCAACGCACTGGTGGGT‑‑GTAAACCCTTACCCACCCACCA < 2:1700805/150‑1 GCTACATCGCCATGAATACCCAGCACAAATACCTCAACGACGTGCGCGTGCGTAAAGCCATCAACATGGCCTTCGACCGCCAGACCCATGTCGACCAACTGTTTGGCAAAGGCAACGCACTGGTGGGT‑‑GTAAACCCTTACACACCCACCA > 1:722532/1‑150 GCTACATCGCCATGAATACCCAGCACAAATACCTCAACGACGTGCGCGTGCGTAAAGCCATCAACATGGCCTTCGACCGCCAGACCCATGTCGAACAACTGTTTGGCAAAGGCAACGCACTGGTGGGT‑‑GTAAACCCTTACCCACCCACCA > 1:722901/1‑150 GAATACCCAGCACAAATACCTCAACGACGTGCGCGTGCGTAAAGCCATCAACATGGCCTTCGACCGCCAGACCCATGTCGACCAACTGTTTGGCAAAGGCAACGCACTGGTGGGTGGGTAAGGGTTTA‑‑CACCCACCAGTGCGTTGCCTTT < 2:1984769/150‑1 CCGCCAGACCCATGTCGACCAACTGTTTGGCAAAGGCAACGCACTGGTGGGT‑‑GTAAACCCTTACCCACCCACCA < 2:910526/74‑1 CCGCCAGACCCATGTCGACCAACTGTTTGGCAAAGGCAACGCACTGGTGGGT‑‑GTAAACCCTTACCCACCCACCA > 1:910526/1‑74 AACGCACTGGTGGGT‑‑GTAAACCCTTACCCACCCACCAGTGCGTTGCCTTTGCCAAACAGTTGGTCGACATGGGTCTGGCGGTCGAAGGCCATGTTGATGGCTTTACGCACGCGCACGTCGTTGAGGTATTTGTGCTG > 1:2063326/1‑137 AACGCACTGGTGGGT‑‑GTAAACCCTTACCCACCCACCAGTGCGTTGCCTTTGCCAAACAGTTGGTCGACATGGGTCTGGCGGTCGAAGGCCATGTTGATGGCTTTACGCACGCGCACGTCGTTGAGGTATTTGTGCTG < 2:2063326/137‑1 GTGGGT‑‑GTAAACCCTTACCCACCCACCAGTGCGTTGCCTTTGCCAAACAGTTGGTCGACATGGGTCTGGCGGTCGAAGGCCATGTTGATGGCTTTACGCACGCGCACGTCGTTGAGGTATTTGTGCTGGGTATTCATGGCGATGTAGCCG > 2:1404327/1‑150 ggCCCACCAGTGCGTTGCCTTTGCCAAACAGTTGGTCGACATGGGTCTGGCGGTCGAAGGCCATGTTGATGGCTTTACGCACGCGCACGTCGTTGAGGTATTTGTGCTGGGTATTCATGGCGATGTAGCCGGTGACCAGGGCCTCGATTT > 1:672539/3‑150 ACCCACCAGTGCGTTGCCTTTGCCAAACAGTTGGTCGACATGGGTCTGGCGGTCGAAGGCCATGTTGATGGCTTTACGC > 1:2320676/1‑79 ACCCACCAGTGCGTTGCCTTTGCCAAACAGTTGGTCGACATGGGTCTGGCGGTCGAAGGCCATGTTGATGGCTTTACGC < 2:2320676/79‑1 CCCACCAGTGCGTTGCCTTTGCCAAACAGTTGGTCGAGATGGGTCTGGCGGTCGAAGGCCATGTTGATGGCTTTACGCACGCGCACGTCGTTGAGGTATTTGTGCTGGGTATTCATGGCGATGTAGCCGGTGACCAGGGCCTCGATTTCT > 1:1891878/1‑150 CCACCAGTGCGTTGCCTTTGCCAAACAGTTGGTCGACATGGGTCTGGCGGTCGAAGGCCATGTTGATGGCTTTACGCACGCGCACGTCGTTGAGGTATTTGTGCTGGGTATTCATGGCGATGTAGCCGGTGACCAGGGCCTCGA > 2:380218/1‑144 CCACCAGTGCGTTGCCTTTGCCAAACAGTTGGTCGACATGGGTCTGGCGGTCGAAGGCCATGTTGATGGCTTTACGCACGCGCACGTCGTTGAGGTATTTGTGCTGGGTATTCATGGCGATGTAGCCGGTGACCAGGGCCTCGA < 1:380218/144‑1 AGTGCGTTGCCTTTGCCAAACAGTTGGTCGACATGGGTCTGGCGGTCGAAGGCCATGTTGATGGCTTTACGCACGCGCACGTCGTTGAGGTATTTGTGCTGGGTATTCATGGCGATGTAGCCGGTGACCAGGGCCTCGATTTCTTCAACC > 2:1771493/1‑150 AGTGCGTTGCCTTTGCCAAACAGTTGGTCGACATGGGTCTGGCGGTCGAAGGCCATGTTGATGGCTTTACGCACGCGCACGTCGTTGAGGTATTTGTGCTGGGTATTCATGGCGATGTAGCCGGTGACCAGGGCCTCGATTTCTTCAACC < 2:954939/150‑1 GGTCACCGGCTACATCGCCATGAATACCCAGCACAAATACCTCAACGACGTGCGCGTGCGTAAAGCCATCAACATGGCCTTCGACCGCCAGACCCATGTCGACCAACTGTTTGGCAAAGGCAACGCACTGGTGGGT‑‑GTAAACCCTTACCCACCCACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1022822‑1022665‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacccaccaGTGCGTTGCCTTTGCCAAACAGTTGGTCGACATGGGTCTGGCGGTCGAAGGCCATGTTGATGGCTTTACGCACGCGCACGTCGTTGAGGTATTTGTGCTGGGTATTCATGGCGATGTAGCCGGTGACCAGGGCCTCGATTTCTTCAACC > NC_002947/1022695‑1022843 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |