New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1098124 =	115 (1.300)	9 (0.110)	7/240	NT	7.4%	coding (460/525 nt)	kdsC	3‑deoxy‑D‑manno‑octulosonate 8‑phosphate phosphatase
	?	NC_002947	1098151 =	115 (1.350)					coding (433/525 nt)	kdsC	3‑deoxy‑D‑manno‑octulosonate 8‑phosphate phosphatase

GATCAAGTGGCTTACCTGGGCGACGACCTGCCCGACCTGCCGGTGATTCGCCGGGTGGCTCTGGGCATGGCCGTAGCCAACGCCGCACCGTTCGTACGCCAGCACGCCCACGGCGTGACCCAGGCACGTGGCGGCGAAGGCGCGGCCCGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1098274‑1098124 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtgCCTGGGTCACGCCGTGGGCGTGCTGGCGTACGAACGGTGCGGCGTTGGCTACGGCCATGCCCAGAGCCACCCGGCGAATCACCGGCAGGTCGGGCAGGTCGTCGCCCAGGTAAGCCACTTGATCATAGCTTAGGCCCAGTTCGGCGAGC  >  NC_002947/1098151‑1098299                                                                                                                                                                                                                                                                                                              GATCAAGTGGCTTACCTGGCCGACGACCTGCCCGACCTGCCGGTGATTCGCCGGGTGGCTCTGGGCATGGCCGTAGCCAACGCCGCACCGTTCGTACGCCAGCACGCCCACGGCGTGACCCAGGCACGTGGCGGCGAAGGCGCGGCCCGT                                                                                                                                                        <  2:1539784/150‑1                           CCTGCCCGACCTGCCGGTGATTCGCCGGGTGGCTCTGGGCATGGCCGTAGCCAACGCCGCACCGTTCGTACGCCAGCACGCCCACGGCGTGACCCAGGCACGTGGCGGCGAAGGCGCGGCCCGT                                                                                                                                                        >  1:644107/1‑124                           CCTGCCCGACCTGCCGGTGATTCGCCGGGTGGCTCTGGGCATGGCCGTAGCCAACGCCGCACCGTTCGTACGCCAGCACGCCCACGGCGTGACCCAGGCACGTGGCGGCGAAGGCGCGGCCCGT                                                                                                                                                        <  2:644107/124‑1                                                                                                                        CCAGGCACGTGGCGGCGAAGGCGCGGCCCGTGCCTGGGTCACGCCGTGGGCGTGCTGGCGTACGAACGGTGCGGCGTTGGCTATGGCCATGCCCAGAGCCACCCGGCGAATCACCGGCAGGTCGGGCAG                                                      <  1:241265/129‑1                                                                                                                        CCAGGCACGTGGCGGCGAAGGCGCGGCCCGTGCCTGGGTCACGCCGTGGGCGTGCTGGCGTACGAACGGTGCGGCGTTGGCTATGGCCATGCCCAGAGCCACCCGGCGAATCACCGGCAGGTCGGGCAG                                                      >  2:241265/1‑129                                                                                                                        CCAGGCACGTGGCGGCGAAGGCGCGGCCCGTGCCTGGGTCACGCCGTGGGCGTGCTGGCGTACGAACGGTGCGGCGTTGGCTACGGCCATGCCCAGAGCCACCCGGCGAAT                                                                        <  1:392943/111‑1                                                                                                                        CCAGGCACGTGGCGGCGAAGGCGCGGCCCGTGCCTGGGTCACGCCGTGGGCGTGCTGGCGTACGAACGGTGCGGCGTTGGCTACGGCCATGCCCAGAGCCACCCGGCGAAT                                                                        >  2:392943/1‑111                                                                                                                        CCAGGCACGTGGCGGCGAAGGCGCGGCCCGTGCCTGGGTCACGCCGTGGGCGTGCTGGCGTACGAACGGTGCGGCGTTG                                                                                                        <  1:1278155/79‑1                                                                                                                        CCAGGCACGTGGCGGCGAAGGCGCGGCCCGTGCCTGGGTCACGCCGTGGGCGTGCTGGCGTACGAACGGTGCGGCGTTG                                                                                                        >  2:1278155/1‑79                                                                                                                          AGGCAAGTGGCGGCGAAGGCGCGGCCCGTGCCTGGGTCACGCCGTGGGCGTGCTGGCGTACGAACGGTGCGGCGTTGGCCACGGCCATGCCCAGAGCCACCCGGCGAATCACCGGCAGGTCGGGCAGGTCGTCGCCCAGGTAAGCCACTT                               >  2:1624581/1‑150                                                                                                                            GCACGTGGCGGCGAAGGCGCGGCCCGTGCCTGGGTCACGCCGTGGGCGTGCTGGCGTACGAACGGTGCGGCGTTGGCTACGGCCATGCCCAGAGCCACCCGGCGAATCACCGGCAGGTCGGGCAGGTCGTCGCCCAGGTAAGCCACTTGA                             >  1:1803648/1‑150                                                                                                                                        GAAGGCGCGGCCCGTGCCTGGGTCACGCCGTGGGCGTGCTGGCGTACGAACGGTGCGGCGTTGGCCACGGCCATGCCCAGAGCCACCCGGCGAATCACCGGCAGGTCGGGCAGGTCGTCGCCCAGGTAAGCCACTTGATCATAGCTTAGG                 <  1:1624581/150‑1                                                                                                                                                      TGCCTGGGTCACGCCGTGGGCGTGCTGGCGTACGAACGGTGCGGCGTTGGCTACGGCCATGCCCAGAGCCACCCGGCGAATCACCGGCAGGTCGGGCAGGTCGTCGCCCAGGTAAGCCACTTGATCATAGCTTAGGCCCAGTTCGGCGAG   <  1:1919892/150‑1                                                                                                                                                       GCCTGGGTCACGCCGTGGGCGTGCTGGCGTACGAACGGTGCGGCGTTGGCTAGGGCCATGCCCAGAGCCACCCGGCGAATCACCGGCAGGTCGGGCAGGTCGTCGCCCAGGTAAGCCACTTGATCATAGCTTAGGCCCAGTTCGGCGAGC  >  1:1813229/1‑150                                                                                                                                                                                                                                                                                                              GATCAAGTGGCTTACCTGGGCGACGACCTGCCCGACCTGCCGGTGATTCGCCGGGTGGCTCTGGGCATGGCCGTAGCCAACGCCGCACCGTTCGTACGCCAGCACGCCCACGGCGTGACCCAGGCACGTGGCGGCGAAGGCGCGGCCCGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1098274‑1098124 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtgCCTGGGTCACGCCGTGGGCGTGCTGGCGTACGAACGGTGCGGCGTTGGCTACGGCCATGCCCAGAGCCACCCGGCGAATCACCGGCAGGTCGGGCAGGTCGTCGCCCAGGTAAGCCACTTGATCATAGCTTAGGCCCAGTTCGGCGAGC  >  NC_002947/1098151‑1098299

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.