New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 189255693 (1.050)6 (0.070) 6/248 NT 6.1% intergenic (+24/‑71) PP_1697/PP_1698 transcriptional regulator, GntR family/MFS transporter
?NC_002947 = 1892582 92 (1.040)intergenic (+50/‑45) PP_1697/PP_1698 transcriptional regulator, GntR family/MFS transporter

GATCGAGCGCCTGGCCCGCGATTACGCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1892433‑1892556
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACTGCGCCGTGGCAG‑CACGGCGCAGACAGGTGAAGGGTGAAGCGACCGGTTTAACGAATGTCGATGCGGTAGCGGAAGTGCTGCGCATGGCCGCGCGAGCGGCGCCATTCCAGAGGTTTGCCGGCGTAATCGCGGG  <  NC_002947/1892582‑1892447
                                                                                                                                                                                                                                                                     
GATCGAGCGCCTGGCCCGCGATTACGCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGGCAG‑CACGGCGCAGA                                                                                                                <  2:1988645/150‑1
                                                                                                             TTCACCCTTCACCTGTCTGCGCCGT‑GCTGCCACGGCGCAGTCAGGTGAAGGGTGAAGCGACCGGTTTAACGAATGTCGATGCGGTAGCGGAAGTGCTGCGCATGGCCGCGCGAGCGGCGCCATTCCAGAG                       >  1:2336155/1‑130
                                                                                                             TTCACCCTTCACCTGTCTGCGCCGT‑GCTGCCACGGCGCAGTCAGGTGAAGGGTGAAGCGACCGGTTTAACGAATGTCGATGCGGTAGCGGAAGTGCTGCGCATGGCCGCGCGAGCGGCGCCATTCCAGAG                       <  2:2336155/130‑1
                                                                                                              TCACCCTTCACCTGTCTGCGCCGTGCTGC‑CACGGCGCAGACAGGTGAAGGGTGAAGCGACCGGTTTAACGAATGTCGATACGGTAGCGGAAGTGCTGCGCATGGCCGCGCGAGCGGCGCCATTCCAGAGGTTTGCCGGCGTAATCGCGGG  >  2:1495469/1‑150
                                                                                                                   CTTCACCTGTCTGCGCCGTGCTGC‑CACGGCGCAGTCAGGTGAAGGGTGAAGCGACCGGTTTAACGAATGTCGATGCGGTAGCGGAAGTGCTGC                                                      <  1:1712606/93‑1
                                                                                                                   CTTCACCTGTCTGCGCCGTGCTGC‑CACGGCGCAGTCAGGTGAAGGGTGAAGCGACCGGTTTAACGAATGTCGATGCGGTAGCGGAAGTGCTGC                                                      >  2:1712606/1‑93
                                                                                                                                                                                                                                                                     
GATCGAGCGCCTGGCCCGCGATTACGCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1892433‑1892556
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACTGCGCCGTGGCAG‑CACGGCGCAGACAGGTGAAGGGTGAAGCGACCGGTTTAACGAATGTCGATGCGGTAGCGGAAGTGCTGCGCATGGCCGCGCGAGCGGCGCCATTCCAGAGGTTTGCCGGCGTAATCGCGGG  <  NC_002947/1892582‑1892447

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.