| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3523465 | NA (NA) | 9 (0.110) | 6/236 | NT | NA | coding (135/1533 nt) | PP_3114 | transposase |
| ? | NC_002947 | = 3523493 | NA (NA) | coding (163/1533 nt) | PP_3114 | transposase | |||||
GATTCGGTATAATCCGCGGCATGATTTCCATGCCCGAAAACCTCCCTGACGATCCGGTTCTGCTCAAGCAACTGCTTGAGCAGATGATCCACGAGCGCGCGTCCGACAAGAGCAAGATCGTTCATCTCGAAGAGGAAGTTGCGCTGTTGCGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3523311‑3523465‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccag‑TC‑TGCTCGGTCTTGCGCCCGAACAAGCGCTGGCGCAACAGCGCAACTTCCTCTTCGAGATGAACGATCTTGCTCTTGTCGGACGCGCGCTCGTGGATCATCTGCTCAAGCAGTTGCTTGAGCAGAACCGGATCGTCAGGGAGGTTTTCG < NC_002947/3523493‑3523345 GATTCGGTATAATCCGCGGCATGATTTCCATGCCCGAAAACCTCCCTGACGATCCGGTTCTGCTCAAGCAACTGCTTGAGCAGATGATCCACGAGCGCGCGTCCGACAAGAGCAAGATCGTTCATCTCGAAGAGGAAGTTGCGCTGTTGC < 1:2131365/150‑1 ATTCGGTATAATCCGCGGCATGATTTCCATGCCCGAAAACCTCCCTGACGATCCGGTTCTGCTCAAGCAACTGCTTGAGCAGATGATCCACGAGCGCGCGTCCGACAAGAGCAAGATCGTTCATCTCGAAGAGGAAGTTGCGCTGTTGCc > 2:94588/1‑149 ATTCGGTATAATCCGCGGCATGATTTCCATGCCCGAAAACCTCCCTGACGATCCGGTTCTGCTCAAGCAACTGCTTGAGCAGATGATCCACGAGCGCGCGTCCGACAAGAGCAAGATCGTTCATCTCGAAGAGGAAGTTGCGCTGTTGCG > 1:98097/1‑150 GGTATAATCCGCGGCATGATTTCCATGCCCGAAAACCTCCCTGACGATCCGGTTCTGCTCAAGCAACTGCTTGAGCAGATGATCCACGAGCGCGCGTCCGACAAGAGCAAGATCGTTCATCTCGAAGAGGAAGTTGCGCTGTTGCGCCAG < 1:2187236/150‑1 GGTATAATCCGCGGCATGATTTCCATGCCCGAAAACCTCCCTGACGATCCGGTTCTGCTCAAGCAACTGCTTGAGCAGATGATCCACGAGCGCGCGTCCGACAAGAGCAAGATCGTTCATCTCGAAGAGGAAGTTGCGCTGTTGCGCCAG > 1:1708466/1‑150 GTATAATCCGCGGCATGATTTCCATGCCCGAAAACCTCCCTGACGATCCGGTTCTGCTCAAGCAACTGCTTGAGCAGATGATCCACGAGCGCGCGTCCGACAAGAGCAAGATCGTTCATCTCGAAGAGGAAGTTGCGCTGTTGCGCCA < 2:506561/148‑1 GTATAATCCGCGGCATGATTTCCATGCCCGAAAACCTCCCTGACGATCCGGTTCTGCTCAAGCAACTGCTTGAGCAGATGATCCACGAGCGCGCGTCCGACAAGAGCAAGATCGTTCATCTCGAAGAGGAAGTTGCGCTGTTGCGCCA > 1:506561/1‑148 ATGATTTCCATGCCCGAAAACCTCCCTGACGATCCGGTTCTGCTCAAGCAACTGCTTGAGCAGATGATCCACGAGCGCGCGTCCGACAAGAGCAAGATCGTTCATCTCGAAGAGGAAGTTGCGCTGTTGCGC < 1:1290831/132‑1 ATGATTTCCATGCCCGAAAACCTCCCTGACGATCCGGTTCTGCTCAAGCAACTGCTTGAGCAGATGATCCACGAGCGCGCGTCCGACAAGAGCAAGATCGTTCATCTCGAAGAGGAAGTTGCGCTGTTGCGC > 2:1290831/1‑132 GATTTCCATGCCCGAAAACCTCCCTGACGATCCGGTTCTGCTCAAGCAACTGCTTGAGCAGATGATCCACGAGCGCGCGTCCGACAAGAGCAAGATCGTTCATCTCGAAGAGGAAGTTGCGCTGTTGCGCCAG‑TC‑TGCTCGGTCTTGCGC > 2:82045/1‑150 AAAACCTCCCTGACGATCCGGTTCTGCTCAAGCAACTGCTTGAGCAGATGATCCACGAGCGCGCGTCCGACAAGAGCAAGATCGTTCATCTCGAAGAGGAAGTTGCGCTGTTGCGCCAG‑TC‑TGCTCGGTCTTGCGCCCGAACAAGCGCTc < 1:82045/150‑2 TCCCTGACGATCCGGTTCTGCTCAAGCAACTGCTTGAGCAGATGATCCACGAGCGCGCGTCCGACAAGAGCAAGATCGTTCATCTCGAAGAGGAAGTTGCGCTGTTGCGCCAG‑TC‑TGCTCGGTCTTGCGCCCGAACAAGCGCTGGCGCAA < 1:2204623/150‑1 CCTGACGATCCGGTTCTGCTCAAGCAACTGCTTGAGCAGATGATCCACGAGCGCGCGTCCGACAAGAGCAAGATCGTTCATCTCGAAGAGGAAGTTGCGCTGTTGC < 2:1098231/106‑1 CCTGACGATCCGGTTCTGCTCAAGCAACTGCTTGAGCAGATGATCCACGAGCGCGCGTCCGACAAGAGCAAGATCGTTCATCTCGAAGAGGAAGTTGCGCTGTTGC > 1:1098231/1‑106 CTGACGATCCGGTTCTGCTCAAGCAACTGCTTGAGCAGATGATCCACGAGCGCGCGTCCGACAAGAGCAAGATCGTTCATCTCGAAGAGGAAGTTGCGCTGTTGCGCCAG‑TC‑TGCTCGGTCTTGCGCCCGAACAAGCGCTG > 2:234236/1‑141 CTGACGATCCGGTTCTGCTCAAGCAACTGCTTGAGCAGATGATCCACGAGCGCGCGTCCGACAAGAGCAAGATCGTTCATCTCGAAGAGGAAGTTGCGCTGTTGCGCCAG‑TC‑TGCTCGGTCTTGCGCCCGAACAAGCGCTG < 1:234236/141‑1 TCAAGCAACTGCTTGAGCAGATGATCCACGAGCGCGCGTCCGACAAGAGCAAGATCGTTCATCTCGAAGAGGAAGTTGCGCTGTTGC > 1:1072876/1‑87 TCAAGCAACTGCTTGAGCAGATGATCCACGAGCGCGCGTCCGACAAGAGCAAGATCGTTCATCTCGAAGAGGAAGTTGCGCTGTTGC < 2:1072876/87‑1 CTGCTTGAGCAGATGATCCACGAGCGCGCGTCCGACAAGAGCAAGATCGTTCATCTCGAAGAGGAAGTTGCGCTGTTGCGCCAGCGCTTGCTCGGTCTTGCGCCCGAACAAG < 1:619670/112‑1 CTGCTTGAGCAGATGATCCACGAGCGCGCGTCCGACAAGAGCAAGATCGTTCATCTCGAAGAGGAAGTTGCGCTGTTGCGCCAGCGCTTGCTCGGTCTTGCGCCCGAACAAG < 1:619521/112‑1 CTGCTTGAGCAGATGATCCACGAGCGCGCGTCCGACAAGAGCAAGATCGTTCATCTCGAAGAGGAAGTTGCGCTGTTGCGCCAGCGCTTGCTCGGTCTTGCGCCCGAACAAG > 2:619521/1‑112 CTGCTTGAGCAGATGATCCACGAGCGCGCGTCCGACAAGAGCAAGATCGTTCATCTCGAAGAGGAAGTTGCGCTGTTGCGCCAGCGCTTGCTCGGTCTTGCGCCCGAACAAG > 2:619670/1‑112 GCCAG‑TC‑TGCTCGGTCTTGCGCCCGACCAAACGCTGGCGCAACAGCGCAACTTCCTCTTCGAGATGAACGATCTTGCTCTTGTCGGACGCGCGCTCGTGGATCATCTGCTCAAGTAGTTGCTTGAGCAGAACCGGATCGTCAGGGAGGTT > 1:2176984/1‑150 GCCAG‑TC‑TGCTCGGTCTTGCGCCCGAACAAGCGCTGGCGCAACAGCGCAACTTCCTCTTCGAGATGAACGATCTTGCTCTTGTCGGACGCGCGCTCGTGGATCATCTGCTCAAGCAGTTGCTTGAGCAGAACCGGATCGTCAGGGAGGTT > 2:2166548/1‑150 GCCAG‑TC‑TGCTCGGTCTTGCGCCCGAACAAGCGCTGGCGCAACAGCGCAACTTCCTCTTCGAGATGAACGATCTTGCTCTTGTCGGACGCGCGCTCGTGGATCATCTGCTCAAGCAGTTGCTT > 2:2031691/1‑123 GCCAG‑TC‑TGCTCGGTCTTGCGCCCGAACAAGCGCTGGCGCAACAGCGCAACTTCCTCTTCGAGATGAACGATCTTGCTCTTGTCGGACGCGCGCTCGTGGATCATCTGCTCAAGCAGTTGCTT < 1:2031691/123‑1 GCCAG‑TC‑TGCTCGGTCTTGCGCCCGAACAAGCGCTGGCGCAACAGCGCAACTTCCTCTTCGAGATGAACGATCTTGCTCTTGTCGGACGCGCGCTCGT < 2:1362453/98‑1 GCCAG‑TC‑TGCTCGGTCTTGCGCCCGAACAAGCGCTGGCGCAACAGCGCAACTTCCTCTTCGAGATGAACGATCTTGCTCTTGTCGGACGCGCGCTCGT > 1:1362453/1‑98 CAG‑TC‑TGCTCGGTCTTGCGCCCGAACAAGCGCTGGCGCAACAGCGCAACTTCCTCTTCGAGATGAACGATCTTGCTCTTGTCGGACGCGCGCTCGTGGATCATCTGCTCAAGCAACTGCTTGAGCA > 2:948564/1‑126 CAG‑TC‑TGCTCGGTCTTGCGCCCGAACAAGCGCTGGCGCAACAGCGCAACTTCCTCTTCGAGATGAACGATCTTGCTCTTGTCGGACGCGCGCTCGTGGATCATCTGCTCAAGCAACTGCTTGAGCA < 1:948564/126‑1 G‑TC‑TGCTCGGTCTTGCGCCCGAACAAGCGCTGGCGCAACAGCGCAACTTCCTCTTCGAGATGAACGATCTTGCTCTTGTCGGACGCGCGCTCGTGGATCATCTGCTCAAGCAGTTGCTTGAGCAGAACCGGATCGTCAGGGAGGTTTTCG > 2:729947/1‑150 G‑TC‑TGCTCGGTCTTGCGCCCGAACAAGCGCTGGCGCAACAGCGCAACTTCCTCTTCGAGATGAACGATCTTGCTCTTGTCGGACGCGCGCTCGTGGATCATCTGCTCAAGCAGTTGCTTGAGCAGAACCGGATCGTCAGGGAGGTTTTCG < 1:1035944/150‑1 GATTCGGTATAATCCGCGGCATGATTTCCATGCCCGAAAACCTCCCTGACGATCCGGTTCTGCTCAAGCAACTGCTTGAGCAGATGATCCACGAGCGCGCGTCCGACAAGAGCAAGATCGTTCATCTCGAAGAGGAAGTTGCGCTGTTGCGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3523311‑3523465‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccag‑TC‑TGCTCGGTCTTGCGCCCGAACAAGCGCTGGCGCAACAGCGCAACTTCCTCTTCGAGATGAACGATCTTGCTCTTGTCGGACGCGCGCTCGTGGATCATCTGCTCAAGCAGTTGCTTGAGCAGAACCGGATCGTCAGGGAGGTTTTCG < NC_002947/3523493‑3523345 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |