| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3523858 | NA (NA) | 7 (0.090) | 9/224 | NT | NA | coding (528/1533 nt) | PP_3114 | transposase |
| ? | NC_002947 | = 3523866 | NA (NA) | coding (536/1533 nt) | PP_3114 | transposase | |||||
AACATGCCATCGGTGAAGAAGTCAGCGAACAACTTGAAATCGTCCCGATGCAGATTCGCGTCATCAAACATGTTCGCAAGGTGTACGGCTGCCGGGACTGCGAGTCAGCGCCCGTAACGGCGGACAAGCCCGCCCAGATGATCGAGAAAAGCATGGCCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3523698‑3523858‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcatggccagcAC‑ACTCGGGCTGGCCATGCTTTTCTCGATCATCTGGGCGGGCTTGTCCGCCGTTACGGGCGCTGACTCGCAGTCCCGGCAGCCGTACACCTTGCGAACATGTTTGATGACGCGAATCTGCATCGGGACGATTTCAAGTTGTTCGCTG < NC_002947/3523866‑3523720 AACATGCCATCGGTGAAGAAGTCAGCGAACAACTTGAAATCGTCCCGATGCAGATTCGCGTCATCAAACATGTTCGCAAGGTGTACGGCTGCCGGGACTGCGAGTCAGCGCCCGTAACGGCGGACAAGCCCGCCCAGATGATCGAGAAAA < 2:1668660/150‑1AACATGCCATCGGTGAAGAAGTCAGCGAACAACTTGAAATCGTCCCGATGCAGATTCGCGTCATCAAACATGTTCGCAAGGTGTACGGCTGCCGGGACTGCGAGTCAGCGCCCGTAACGGCGGACAAGCCCGCCCAGATGATCGAGAAAA > 1:2070711/1‑150AACATGCCATCGGTGAAGAAGTCAGCGAACAACTTGAAATCGTCCCGATGCAGATTCGCGTCATCAAACATGTTCGCAAGGTGTACGGCTGCCGGGACTGCGAGTCAGCGCCCGTAACGGCGGACAAGCCCGCCCAGATGATCGAGAAAA < 2:2059298/150‑1 TGCCATCGGTGAAGAAGTCAGCGAACAACTTGAAATCGTCCCGATGCAGATTCGCGTCATCAAACATGTTCGCAAGGTGTACGGCTGCCGGGACTGCGAGTCAGCGCCCGTAACGGCGGACAAGCCCGCCCAGATGATCGAGAAAAGCAT < 1:619954/150‑1 GCCATCGGTGAAGAAGTCAGCGAACAACTTGAAATCGTCCCGATGCAGATTCGCGTCATCAAACATGTTCGCAAGGTGTACGGCTGCCGGGACTGCGAGTCAGCGCCCGTAACGGCGGACAAGCCCGCCCAGATGATCGAGAAAAGCATG < 2:2154766/150‑1 CCATCGGTGAAGAAGTCAGCGAACAACTTGAAATCGTCCCGATGCAGATTCGCGTCATCAAACATGTTCGCAAGGTGTACGGCTGCCGGGACTGCGAGTCAGCGCCCGTAACGGCGGACAAGCCCGCCCAGATGATCGAGAAAAGCATGG < 1:1317473/150‑1 CATCGGTGAAGAAGTCAGCGAACAACTTGAAATCATGCCAATTCAGATTCGCGTCATCAAACATGTTCGCAAGGTGTACGGCTGCCGGGACTGCGAGTCAGCGCCCGTAACGGCGGACAAGCCCGCCCAGATGATCGAGAAAAGCATGGC < 1:1873610/150‑1 TCGGTGAAGAAGTCAGCGAACAACTTGAAATCGTCCCGATGCAGATTCGCGTCATCAAACATGTTCGCAAGGTGTACGGCTGCCGGGACTGCGAGTCAGCGCCCGTAACGGCGGACAAGCCCGCCCAGATGATCGAGAAAAGCATGGCCA < 2:1010961/150‑1 GGTGAAGAAGTCAGCGAACAACTTGAAATCGTCCCGATGCAGATTCGCGTCATCAAACATGTTCGCAAGGTGTACGGCTGCCGGGACTGCGAGTCAGCGCCCGTAACGGCGGACAAGCCCGCCCAGATGATCGAGAAAAGCATGGCCAGC < 1:1209519/150‑1 GCGAACAACTTGAAATCGTCCCGATGCAGATTCGCGTCATCAAACATGTTCGCAAGGTGTACGGCTGCCGGGACTGCGAGTCAGCGCCCGTAACGGCGGACAAGCCCGCCCAGATGATCGAGAAAAGCATGGCCAGCAC‑ACTCGGGCTGG < 1:1931594/150‑1 GCGAACAACTTGAAATCGTCCCGATGCAGATTCGCGTCATCAAACATGTTCGCAAGGTGTACGGCTGCCGGGACTGCGAGTCAGCGCCCGTAACGGCGGACAAGCCCGCCCAGATGATCGAGAAAAGCATGGCCAGCAC‑ACTCGGGCTGG < 1:307261/150‑1 ACAACTTGAAATCGTCCCGATGCAGATTCGCGTCATCAAACATGTTCGCAAGGTGTCCGGCTGCCGGGACTGCGAGTCAGCGCCCGTAACGGCGGACAAGCCCGCCCAGATGATCGAGAAAAGCATGGCCAGCAC‑ACTCGGGCTGGCCAT < 1:615837/150‑1 ATCGTCCCGATGCAGATTCGCGTCATCAAACATGTTCGCAAGGTGTACGGCTGCCGGGACTGCGAGTCAGCGCCCGTAACGGCGGACAAGCCCGCCCAGATGATCGAGAAAAGCATGGCCA > 1:1657470/1‑121 ATCGTCCCGATGCAGATTCGCGTCATCAAACATGTTCGCAAGGTGTACGGCTGCCGGGACTGCGAGTCAGCGCCCGTAACGGCGGACAAGCCCGCCCAGATGATCGAGAAAAGCATGGCCA < 2:1657470/121‑1 GTCCCGATGCAGATTCGCGTCATCAAACATGTTCGCAAGGTGTACGGCTGCCGGGACTGCGAGTCAGCGCCCGTAACGGCGGACAAGCCCGCCCAGATGATCGAGAAAA < 2:2328610/109‑1 GTCCCGATGCAGATTCGCGTCATCAAACATGTTCGCAAGGTGTACGGCTGCCGGGACTGCGAGTCAGCGCCCGTAACGGCGGACAAGCCCGCCCAGATGATCGAGAAAA > 1:2328610/1‑109 GTCATCAAACATGTTCGCAAGGTGTACGGCTGCCGCGACTGCGAGTCAGCGCCCGTAACGGCGGACAAGCCCGCCCAGATGATCGAGAAAAGCATGGC < 2:207245/98‑1 GTCATCAAACATGTTCGCAAGGTGTACGGCTGCCGCGACTGCGAGTCAGCGCCCGTAACGGCGGACAAGCCCGCCCAGATGATCGAGAAAAGCATGGC > 1:207245/1‑98 TTCGCAAGGTGTACGGCTGCCGGGACTGCGAGTCAGCGCCCGTAACGGCGGACAAGCCCGCCCAGATGATCGAGAAAAGCATG < 1:1568791/83‑1 TTCGCAAGGTGTACGGCTGCCGGGACTGCGAGTCAGCGCCCGTAACGGCGGACAAGCCCGCCCAGATGATCGAGAAAAGCATG > 2:1568791/1‑83 GCAAGGTGTACGGCTGCCGGGACTGCGAGTCAGCGCCCGTAACGGCGGACAAGCCCGCCCAGATGATCGAGAAAAGCATGGCCAGCAC‑ACTCGGG < 1:1801/95‑1 GCAAGGTGTACGGCTGCCGGGACTGCGAGTCAGCGCCCGTAACGGCGGACAAGCCCGCCCAGATGATCGAGAAAAGCATGGCCAGCAC‑ACTCGGG > 2:1801/1‑95 GATCGAGAAAAGCATGGCCAGCCCGAGT‑GTGCTGGCCATGCTTTTCTCGATCATCTGGGCGGGCTTGTCCGCCGTTACGGGCGCTGACTCGCAGTCCCGGCAGCCGTACACCTTGCGAACATGTTT > 2:1514420/1‑126 GATCGAGAAAAGCATGGCCAGCCC‑GAGTGTGCTGGCCATGCTTTTCTCGATCATCTGGGCGGGCTTGTCCGCCGTTACGGGCGCTGACTCGCAGTCCCGGCAGCCGTACACCTTGCGAACATGTTT < 1:1514420/126‑1 AGAAAAGCATGGCCAGCCCGAGT‑GTGCTGGCCATGCTTTTCTCGATCATCTGGGCGGGCTTGTCCGCCGTTACGGGCGCTGA < 2:1607268/82‑1 AGAAAAGCATGGCCAGCCCGAGT‑GTGCTGGCCATGCTTTTCTCGATCATCTGGGCGGGCTTGTCCGCCGTTACGGGCGCTGA > 1:1607268/1‑82 AGCATGGCCAGCAC‑ACTCGGGCTGGCCATGCTTTTCTCGATCATCTGGGCGGGCTTGTCCGCCGTTACGGGCGCTGACTCGCAGTCCCGGCAGCCGTACACCTTGCGAACATGTTTGATGACGCGAATCTGCATCGGGACGATTTCAAGT > 1:210435/1‑150 GCATGGCCAGCAC‑ACTCGGGCTGGCCATGCTTTTCTCGATCATCTGGGCGGGCTTGTCCGCCGTTACGGGCGCTGACTCGCAGTCCCGGCAGCCGTACACCTTGCGAACATGTTTGATGACGC < 1:408591/123‑1 GCATGGCCAGCAC‑ACTCGGGCTGGCCATGCTTTTCTCGATCATCTGGGCGGGCTTGTCCGCCGTTACGGGCGCTGACTCGCAGTCCCGGCAGCCGTACACCTTGCGAACATGTTTGATGACGC > 2:408591/1‑123 CATGGCCAGCAC‑ACTCGGGCTGGCCATGCTTTTCTCGATCATCTGGGCGGGCTTGTCCGCCGTTACGGGCGCTGACTCGCAGTTCCGGCAGCCGTACACCTTGCGAACATGTTTGATGACGCGAATCTGCATCGGGACGATTTCAAGTTG > 1:609586/1‑150 CATGGCCAGCAC‑ACTCGGGCTGGCCATGCTTTTCTCGATCATCTGGGCGGGCTTGTCCGCCGTTACGGGCGCTGACTCGCAGTCCCGGCAGCCGTACACCTTGCGAACATGTTTGATGACGCGAATCTGCATCGGGACGATTTCAAGTag > 1:1094354/1‑148 ATGGCCAGCAC‑ACTCGGGCTGGCCATGCTTTTCTCGATCATCTGGGCGGGCTTGTCCGCCGTTACGGGCGCTGACTCGCAGTCCCGGCAGCCGTACACCTTGCGAACATGTTTGATGACGCGAATCTGCATCGGGACGATTTCAAGTTGT > 1:1427537/1‑150 ATGGCCAGCAC‑ACTCGGGCTGGCCATGCTTTTCTCGATCATCTGGGCGGGCTTGTCCGCCGTTACGGGCGCTGACTCGCAGTCCCGGCAGCCGTACACCTTGCGAACATGTTTGATGACGCGAATCTGCATCGGGACGATTTCAAGTTGT > 1:2326608/1‑150 ATGGCCAGCAC‑ACTCGGGCTGGCCATGCTTTTCTCGATCATCTGGGCGGGCTTGTCCGCCGTTACGGGCGCTGACTCGCAGTCCCGGCAGCCCAATTTGTGTCATACAGTTGTGATGACGCGAATCTGCATCGGGACGATTTCAAGTTGT > 1:1686551/1‑150 ATGGCCAGCAC‑ACTCGGGCTGGCCATGCTTTTCTCGATCATCTGGGCGGGCTTGTCCGCCGTTACGGGCGCTGA < 2:1109021/74‑1 ATGGCCAGCAC‑ACTCGGGCTGGCCATGCTTTTCTCGATCATCTGGGCGGGCTTGTCCGCCGTTACGGGCGCTGA > 1:1109021/1‑74 TGGCCAGCAC‑GAGTGTGCTGGCAAAGCTTTTCTAGAGCATTGGGGCGGGCGTGTGCGCCGTTACGGGCGCTGACTCGCAGTCCCGGCAGCCGTACACCTTGCGAACATGTTTGATGACGCGAATCTGCATCGGGACGATTTCAAGTTGTT > 2:267798/1‑150 GCCAGCAC‑ACTCGGGCTGGCCATGCTTTTCTCGATCATCTGGGCGGGCTTGTCCGCCGTTACGGGCGCTGACTCGCAGTCCCGGCAGCCGTACACCTTGCGAACATGTTTGATGACGCGAATCTGCATCGGGACGATTTCAAGTTGTTCG < 1:750411/150‑1 CCAGCAC‑ACTCGGGCTGGCCATGCTTTTCTCGATCATCTGGGCGGGCTTGTCCGCCGTTACGGGCGCTGACTCGCAGTCCCGGCAGCCGTACACCTTGCGAACATGTTTGATGACGCGAATCTGCATCGGGACGATTTCAAGTTGTTCGC < 1:1380209/150‑1 CCAGCAC‑ACTCGGGCTGGCCATGCTTTTCTCGATCATCTGGGCGGGCTTGTCCGCCGTTACGGGCGCTGACTCGCAGTCCCGGCAGCCGTACACCTTGC > 2:1813719/1‑99 CCAGCAC‑ACTCGGGCTGGCCATGCTTTTCTCGATCATCTGGGCGGGATTGTCCGCCGTTACGGGCGCTGACTCGCAGTCCCGGCAGCCGTACACCTTGC < 1:1813719/99‑1 CAGCAC‑ACTCGGGCTGGCCATGCTTTTCTCGATCATCTGGGCGGGCTTGTCCGCCGTTACGGGCGCTGACTCGCAGTCCCGGCAGCCGTACACCTTGCGAACATGTTTGATGACGCGAATCTGCATCGGGACGATTTCAAGTTGTTCGCT > 2:2132284/1‑150 CAGCAC‑ACTCGGGCTGGCCATGCTTTTCTCGATCATCTGGGCGGGCTTGTCCGCCGTTACGGGCGCTGACTCGCAGTCCCGGCAGCCGTACACCTTGCGAACATGTTTGATGACGCGAATCTGCATCGGGACGATTTCAAGTTGTTCGCT > 1:529720/1‑150 AGCAC‑ACTCGGGCTGGCCATGCTTTTCTCGATCATCTGGGCGGGCTTGTCCGCCGTTACGGGCGCTGACTCGCAGTCCCGGCAGCCGTACACCTTGCGAACATGTTTGATGACGCGAATCTGCATCGGGACGATTTCAAGTTGTTCGCTG > 1:302870/1‑150 CAC‑ACTCGGGCTGGCCATGCTTTTCTCGATCATCTGGGCGGGCTTGTCCGCCGTTACGGGCGCTGACTCGCAGTCCCGGCAGCCGTACACCTTGCGAACATGTTTGATGACGCGAATCTGCATCGGGACGATTTCAA > 1:407432/1‑137 CAC‑ACTCGGGCTGGCCATGCTTTTCTCGATCATCTGGGCGGGCTTGTCCGCCGTTACGGGCGCTGACTCGCAGTCCCGGCAGCCGTACACCTTGCGAACATGTTTGATGACGCGAATCTGCATCGGGACGATTTCAA < 2:407432/137‑1 AACATGCCATCGGTGAAGAAGTCAGCGAACAACTTGAAATCGTCCCGATGCAGATTCGCGTCATCAAACATGTTCGCAAGGTGTACGGCTGCCGGGACTGCGAGTCAGCGCCCGTAACGGCGGACAAGCCCGCCCAGATGATCGAGAAAAGCATGGCCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3523698‑3523858‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcatggccagcAC‑ACTCGGGCTGGCCATGCTTTTCTCGATCATCTGGGCGGGCTTGTCCGCCGTTACGGGCGCTGACTCGCAGTCCCGGCAGCCGTACACCTTGCGAACATGTTTGATGACGCGAATCTGCATCGGGACGATTTCAAGTTGTTCGCTG < NC_002947/3523866‑3523720 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |