| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4121729 | 70 (0.790) | 4 (0.050) | 4/238 | NT | 5.4% | coding (102/789 nt) | PP_3624 | hypothetical protein |
| ? | NC_002947 | = 4121744 | 74 (0.870) | coding (87/789 nt) | PP_3624 | hypothetical protein | |||||
CACCGATCAGTCGCTGAGGGTTCAGCGGGTCGCGCCACAGGTACGGGGGGTATTCCGGGTTGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4121665‑4121729‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcctACGGCTGACCGCCACAGGCAACCCGGAATACCCCCCGTACCTGTGGCGCGACCCGCTGAACCCTCAGCGACTGATCGGTGCCAATGCCGACCTGCTCAAATACCTGGGCAAGCAGTTGGGGCTGGAGATAGAGGTGGTTTACGCC < NC_002947/4121744‑4121600 CACCGATCAGTCGCTGAGGGTTCAGCGGGTCGCGCCACAGGTACGGGGGGTATTCCGGGTTGCCTACGGCTGACCGCCACAGGCAAC > 1:618675/1‑87CACCGATCAGTCGCTGAGGGTTCAGCGGGTCGCGCCACAGGTACGGGGGGTATTCCGGGTTGCCTACGGCTGACCGCCACAGGCAAC < 2:618675/87‑1 CACAGGTACGGGGGGTATTCCGGGTTGCCTGTGGCGGTCAGCCGTAGGCAACCCGGAATACCCCCCGTACCTGTGGCGCGACCCGCTGAACCCTCAGCGACTGAT < 1:261510/105‑1 CACAGGTACGGGGGGTATTCCGGGTTGCCTGTGGCGGTCAGCCGTAGGCAACCCGGAATACCCCCCGTACCTGTGGCGCGACCCGCTGAACCCTCAGCGACTGAT > 2:261510/1‑105 TGCCTACGGCTGACCGCCACAGGCAACCCGGAATACCCCCCGTACCTGTGGCGCGACCCGCTGAACCCTCAGCGACTGATCGGTGCCAATGCCGACCTGCTCAAATACCTGGGCAAGCAGTTGGGGCTGGAGATAGAGGTGGTTTACGCC < 2:1383892/150‑1 CTACGGCTGACCGCCACAGGCAACCCGGAATACCCCCCGTACCTGTGGCGCGACCCGCTGAACCCTCAGCGACTGATCGGTGCCAATGCCGACCTGCTCAAATACCTGGGCAAGCAGTTGGGGCTGGA > 1:1861770/1‑128 CTACGGCTGACCGCCACAGGCAACCCGGAATACCCCCCGTACCTGTGGCGCGACCCGCTGAACCCTCAGCGACTGATCGGTGCCAATGCCGACCTGCTCAAATACCTGGGCAAGCAGTTGGGGCTGGA < 2:1861770/128‑1 CTACGGCTGACCGCCACAGGCAACCCGGAATACCCCCCGTACCTGTGGCGCGACCCGCTGAACCCTCAGCGACTGATCGGTGCCAATGCCGACCTGCT < 1:2066185/98‑1 CTACGGCTGACCGCCACAGGCAACCCGGAATACCCCCCGTACCTGTGGCGCGACCCGCTGAACCCTCAGCGACTGATCGGTGCCAATGCCGACCTGCT > 2:2066185/1‑98 CACCGATCAGTCGCTGAGGGTTCAGCGGGTCGCGCCACAGGTACGGGGGGTATTCCGGGTTGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4121665‑4121729‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcctACGGCTGACCGCCACAGGCAACCCGGAATACCCCCCGTACCTGTGGCGCGACCCGCTGAACCCTCAGCGACTGATCGGTGCCAATGCCGACCTGCTCAAATACCTGGGCAAGCAGTTGGGGCTGGAGATAGAGGTGGTTTACGCC < NC_002947/4121744‑4121600 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |