| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4420534 | 93 (1.050) | 6 (0.070) | 4/226 | NT | 7.1% | coding (240/1662 nt) | PP_3912 | DNA‑cytosine methyltransferase |
| ? | NC_002947 | = 4420552 | 73 (0.910) | coding (258/1662 nt) | PP_3912 | DNA‑cytosine methyltransferase | |||||
TGGTATGCCGAGATCGAGCCATTCCCCTGCGCTGTTCTGGCTCACCACTACCCCGCTACGCCGAACCACGGCGACATGACCCGCCTGGCAGCCATGGTGCTGTCCGGCAAGATTCCAGCGCCCGAGGTGCTGGTCGGCGGCACGCCCTGCCAGGCCTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4420376‑4420534‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccaggccttcTCGCATGCCGGCCACGCTGAAGGCCTGGCAGGGCGTGCCGCCGACCAGCACCTCGGGCGCTGGAATCTTGCCGGACAGCACCATGGCTGCCAGGCGGGTCATGTCGCCGTGGTTCGGCGTAGCGGGGTAGTGGTGAGCCAGAACAGCGC < NC_002947/4420552‑4420404 TGGTATGCCGAGATCGAGCCATTCCCCTGCGCTGTTCTGGCTCACCACTACCCCGCTACGCCGAACCACGGCGACATGACCCGCCTGGCAGCCATGGTGCTGTCCGGCAAGATTCCAGCGCCCGAGGTGCTGGTCGGCGGCACGCCCTGC < 2:458450/150‑1 TATGCCGAGATCGAGCCATTCCCCTGCGCTGTTCTGGCTCACCACTACCCCGCTACGCCGAACCACGGCGACATGACCCGCCTGGCAGCCATGGTGCTGTCCGGCAAGATTCCAGCGCCCGAGGTGCTGGTCGGCGGCACGCCCTGCCAG > 1:623762/1‑150 TGCCGAGATCGAGCCATTCCCCTGCGCTGTTCTGGCTCACCACTACCCCGCTACGCCGAACCACGGCGACATGACCCGCCTGGCAGCCATGGTGCTGTCCGGCAAGATTCCAGCGCCCGAGGTGCTGGTCGGCGGCACGCCCTGCCAGGC < 1:600495/150‑1 GCCGAGATCGAGCCATTCCCCTGCGCTGTTCTGGCTCACCACTACCCCGCTACGCCGAACCACGGCGACATGACCCGCCTGGCAGCCATGGTGCTGTCCGGCAAGATTCCAGCGCCCGAGGTGCTGGTCGGCGGCACGCCCTGCCAGGCC < 2:857157/150‑1 GCCGAGATCGAGCCATTCCCCTGCGCTGTTCTGGCTCACCACTACCCCGCTACGCCGAACCACGGCGACATGACCCGCCTGGCAGCCATGGTGCTGTCCGGCAAGATTCCAGCGCCCGAGGTGCTGGTCGGCGGCACGCCCTGCCAGGCC > 2:6830/1‑150 CGAGATCGAGCCATTCCCCTGCGCTGTTCTGGCTCACCACTACCCCGCTACGCCGAACCACGGCGACATGACCCGCCTGGCAGCCATGGTGCTGTCCGGCAAGATTCCAGCGCCCGAGGTGCTGGTCGGCGGCACGCCCTGCCAGGCCTT < 1:1487432/150‑1 CGAGATCGAGCCATTCCCCTGCGCTGTTCTGGCTCACCACTACCCCGCTACGCCGAACCACGGCGACATGACCCGCCTGGCAGCCATGGTGCTGTCCGGCAAGATTCCAGCGCCCGAGGTGCTGGTCGGCGGCACGCCCTGCCAGGCCTT > 1:963771/1‑150 GAGATCGAGCCATTCCCCTGCGCTGTTCTGGCTCACCACTACCCCGCTACGCCGAACCACGGCGACATGACCCGCCTGGCAGCCATGGTGCTGTCCGGCAAGATTCCAGCGCCCGAGGTGCTGGTCGGCGGCACGCCCTGCCAGGCCTTC < 2:692039/150‑1 GAGATCGAGCCATTCCCCTGCGCTGTTCTGGCTCACCACTACCCCGCTACGCCGAACCACGGCGACATGACCCGCCTGGCAGCCATGGTGCTGTCCGGCAAGATTCCAGCGCCCGAGGTGCTGGTCGGCGGCACGCCCTGCCAGGCCTTC > 1:692039/1‑150 TCTGGCTCACCACTACCCCGCTACGCCGAACCACGGCGACATGACCCGCCTGGCAGCCATGGTGCTGTCCGGCAAGATTCCAGCGCCCGAGGTGCTGGTCGGCGGCACGCCCTGCCAGGCCTTCTCGCATGCCGGCCACGCTGAAGGCCT < 1:393695/150‑1 gGGCTCACCACTACCCCCCTACGCCGAACCACAGCTTCATGACCCGCCTGGCAGCCATGGTGCTGCCCGGCAAGATTCCAGCGCCCGAGGTGCTGGTCGGCNGNANGCCCTGCCAGGCCTTNTCGCATGCCGGCCACGCTGAAGGCCTGG < 1:1181318/149‑1 CCGCCTGGCAGCCATGGTGCTGTCCGGCAAGATTCCAGCGCCCGAGGTGCTGGTCGGCGGCACGCCCTTCCAGGCCTTCTCGCATGCCGGCCACGCTGAAGGCCT > 2:904891/1‑105 CCGCCTGGCAGCCATGGTGCTGTCCGGCAAGATTCCAGCGCCCGAGGTGCTGGTCGGCGGCACGCCCTTCCAGGCCTTCTCGCATGCCGGCCACGCTGAAGGCCT < 1:904891/105‑1 AGCGCCCGAGGTGCTGGTCGGCGGCACGCCCTGCCAGGCCTTCTCGCATGCCGGCCACGCTGAAGGCCT > 1:763293/1‑69 AGCGCCCGAGGTGCTGGTCGGCGGCACGCCCTGCCAGGCCTTCTCGCATGCCGGCCACGCTGAAGGCCT < 2:763293/69‑1 GCCAGGCCTTCTCGCATGCCGGCCACGCTGAAGGCCTGGCAGGGCGTGCCGCCGACCAGCACCTCGGGCGCTGGAATCTTGCCGGACAGCACCATGGCTGCCAGGCGGGTCATGTCGCCGTGGTTCGGCGTAGCGGGGTAGTGGTGAGCC < 2:45042/150‑1 CCAGGCCTTCTCGCATGCCGGCCACGCTGAAGGCCTGGCAGGGCGTGCCGCCGACCAGCACCTCGGGCGCTGGAATCTTGCCGGACAGCACCATGGCTGCCAGGCGGGTCATGTCGCCATGGTTCGGCGTAGCGGGGTAGTGGTGAGCCA < 2:1436008/150‑1 CAGGCCTTCTCGCATGCCGGCCACGCTGAAGGCCTGGCAGGGCGTGCCGCCGACCAGCACCTCGGGCGCTGGAATCTTGCCGGACAGCACCATGGCTGCC > 2:2336428/1‑100 CAGGCCTTCTCGCATGCCGGCCACGCTGAAGGCCTGGCAGGGCGTGCCGCCGACCAGCACCTCGGGCGCTGGAATCTTGCCGGACAGCACCATGGCTGCC < 1:2336428/100‑1 AGGCCTTCTCGCATGCCGGCCACGCTGAAGGCCTGGCAGGGCGTGCCGCCGACCAGCACCTCGGGCGCTGGAATCTTGCCGGACAGCACCATGGCTGCCAGGCGGGTCATGTCGCCGTGGTTCGGCGTAGCGGGGTAGTGGTGAGCCAGA > 2:456168/1‑150 GGCCTTCTCGCATGCCGGCCACGCTGAAGGCCTGGCAGGGCGTGCCGCCGACCAGCACCTCGGGCGCTGGAATCTTGCCGGACAGCACCCTGGCTGCCAGGCGGGTCATGTCGCCGTGGTTCGTCGTAGCGGGGTAGTGGTGAGCCAGAA < 2:615179/150‑1 CCTTCTCGCATGCCGGCCACGCTGAAGGCCTGGCAGGGCGTGCCGCCGACCAGCACCTCGGGCGCTGGAATCTTGCCGGACAGCACCATGGCTGCCAGGCGGGTCATGTCGCCGTGGTTCGGCGTAGCGGGGTAGTGGTGAGCCAGAACA > 2:1917328/1‑150 CTTCTCGCATGCCGGCCACGCTGAAGGCCTGGCAGGGCGTGCCGCCGACCAGCACCTCGGGCGCTGGAATCTTGCCGGACAGCACCATGGCTGCCAGGCGGGTCATGTCGCCGTGGTTCGGCGTAGCGGGGTAGTGGTGAGCCAGAACAG > 1:2018695/1‑150 CTCGCATGCCGGCCACGCTGAAGGCCTGGCAGGGCGTGCCGCCGACCAGCACCTCGGGCGCTGGAATCTTGCCGGACAGCACCATGGCTGCCAGGCGGGTCATGTCGCCGTGGTTCGGCGTAGCGGGGTAGTGGTGAGCCAGAACAGCGC < 1:456168/150‑1 TGGTATGCCGAGATCGAGCCATTCCCCTGCGCTGTTCTGGCTCACCACTACCCCGCTACGCCGAACCACGGCGACATGACCCGCCTGGCAGCCATGGTGCTGTCCGGCAAGATTCCAGCGCCCGAGGTGCTGGTCGGCGGCACGCCCTGCCAGGCCTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4420376‑4420534‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccaggccttcTCGCATGCCGGCCACGCTGAAGGCCTGGCAGGGCGTGCCGCCGACCAGCACCTCGGGCGCTGGAATCTTGCCGGACAGCACCATGGCTGCCAGGCGGGTCATGTCGCCGTGGTTCGGCGTAGCGGGGTAGTGGTGAGCCAGAACAGCGC < NC_002947/4420552‑4420404 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |