| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4668931 | 92 (1.040) | 7 (0.080) | 6/238 | NT | 7.0% | coding (757/1533 nt) | nuoM | NADH‑quinone oxidoreductase subunit M |
| ? | NC_002947 | = 4668953 | 97 (1.150) | coding (779/1533 nt) | nuoM | NADH‑quinone oxidoreductase subunit M | |||||
CCTGCTCAAGGCCGAGTTGCCGGCCGGTATCGAGTACGTGCTGATGCTGGGCTTCTTCATCGCCTTCGCGGTGAAGCTGCCAGTGGTGCCGTTCCACTCCTGGCTGCCTGACGCTCACGCCCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4668807‑4668931‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaggTCCACCGAGCCTGCGGTCGGTGCCTGGGCGTGAGCGTCAGGCAGCCAGGAGTGGAACGGCACCACTGGCAGCTTCACCGCGAAGGCGATGAAGAAGCCCAGCATCAGCACGTACTCGATACCGGCCGGCAACTCGGCCTTGAGCAGGTC < NC_002947/4668953‑4668805 CCTGCTCAAGGCCGAGTTGCCGGCCGGTATCGAGTACGTGCTGATGCTGGGCTTCTTCATCGCCTTCGCGGTGAAGCTGCCAGTGGTGCCGTTCCACTCCTGGCTGCCTGACGCTCACGCCCAGG‑‑CACCGAGCCTGCGGTCGGTGCCTGG < 2:877139/150‑1 GCCGAGTTGCCGGCCGGTATCGAGTACGTGCTGATGCTGGGCTTCTTCATCGCCTTCGCGGTGAAGCTGCCAGTGGTGCCGTTCCACTCCTGGCTGCCTGACGCTCACGCCCAGGTCCACCGAGCCTGCGGTCGGTGCCTGGGCGTGAGC < 1:2337169/150‑1 TCGAGTACGTGCTGATGCTGGGCTTCTTCATCGCCTTCGCGGTGAAGCTGCCAGTGGTGCCGTTCCACTCCTGGCTGCCTGACGCTCACGCCCA > 1:1648467/1‑94 TCGAGTACGTGCTGATGCTGGGCTTCTTCATCGCCTTCGCGGTGAAGCTGCCAGTGGTGCCGTTCCACTCCTGGCTGCCTGACGCTCACGCCCA < 2:1648467/94‑1 GCTGGGCTTCTTCATCGCCTTCGCGGTGAAGCTGCCAGTGGTGCCGTTCCACTCCTGGCTGCCTGACGCTCACGCCCAGGTCCACCGAGCCTGCGGTCGGTGCCTGG > 1:1586695/1‑107 GCTGGGCTTCTTCATCGCCTTCGCGGTGAAGCTGCCAGTGGTGCCGTTCCACTCCTGGCTGCCTGACGCTCACGCCCAGGTCCACCGAGCCTGCGGTCGGTGCCTGG < 2:1586695/107‑1 CTTCGCGGTGAAGCTGCCAGTGGTGCCGTTCCACTCCTGGCTGCCTGACGCTCACG‑CCAGGTCCACCGAGCCTGCGGTCGGTGCCTGGGCGTGAGCGTCAGGCAGCCAGGAGTGGAA > 1:394246/1‑117 CTTCGCGGTGAAGCTGCCAGTGGTGCCGTTCCACTCCTGGCTGCCTGACGCTCACG‑CCAGGTCCACCGAGCCTGCGGTCGGTGCCTGGGCGTGAGCGTCAGGCAGCCAGGAGTGGAA < 2:394246/117‑1 TGGCTGCCTGACGCCCACG‑CCAGGTCCACCGAGCCTGCGGTCGGTGCCTGGGCGTGAGCGTCAGGCAGCCAGGAGTGGAACGGCACCACTGGCAGCTTCACCGCGAAGGCGATGAAGAAGCCCAGCATCAGCACGTACTCGATACCGGCC > 2:2051679/1‑150 AGGTCCACCGAGCCTGCGGTCGGTGCCTGGGCGTGAGCGTCAGGCAGCCAGGAGTGGAACGGCAC > 1:970420/1‑65 AGGTCCACCGAGCCTGCGGTCGGTGCCTGGGCGTGAGCGTCAGGCAGCCAGGAGTGGAACGGCAC < 2:970420/65‑1 GTCCACCGAGCCTGCGGTCGGTGCCTGGGCGTGAGCGTCAGGCAGCCAGGAGTGGAACGGCACCACTGGCAGCTTCACCGCGAAGGCGATGAAGAAGCCCAGCATCAGCACGTACTCGATACCGGCCGGCAACTCGGCCTTGAGCAGGTC > 2:1052512/1‑150 GTCCACCGAGCCTGCGGTCGGTGCCTGGGCGTGAGCGTCAGGCAGCCAGGAGTGGAACGGCACCACTGGCAGCTTCACCGCGAAGGCGATGAAGAAGCCCAGCATCAGCACGTA > 1:1109222/1‑114 GTCCACCGAGCCTGCGGTCGGTGCCTGGGCGTGAGCGTCAGGCAGCCAGGAGTGGAACGGCACCACTGGCAGCTTCACCGCGAAGGCGATGAAGAAGCCCAGCATCAGCACGTA < 2:1109222/114‑1 CCTGCTCAAGGCCGAGTTGCCGGCCGGTATCGAGTACGTGCTGATGCTGGGCTTCTTCATCGCCTTCGCGGTGAAGCTGCCAGTGGTGCCGTTCCACTCCTGGCTGCCTGACGCTCACGCCCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4668807‑4668931‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaggTCCACCGAGCCTGCGGTCGGTGCCTGGGCGTGAGCGTCAGGCAGCCAGGAGTGGAACGGCACCACTGGCAGCTTCACCGCGAAGGCGATGAAGAAGCCCAGCATCAGCACGTACTCGATACCGGCCGGCAACTCGGCCTTGAGCAGGTC < NC_002947/4668953‑4668805 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |