| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4793607 = | 105 (1.190) | 6 (0.070) | 6/232 | NT | 5.8% | coding (278/6525 nt) | pvdI | non‑ribosomal peptide synthetase |
| ? | NC_002947 | 4793634 = | 95 (1.150) | coding (251/6525 nt) | pvdI | non‑ribosomal peptide synthetase | |||||
GCCTGGGGTCGAGGTTGCTGCCCGTGACGCGCTGTCATATGCCCAGCAGCGCATGTGGTTCGCCTGGCGGCTCGATGCCAAGAGTGCTGCCTACAACCTGCCCATGGCAGTCAAGCTCAAGGGGCCGATAGCGCCTGAGGCCTTGCAGCAGGCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4793762‑4793607‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggcgctATCGGCCCCTTGAGCTTGACTGCCATGGGCAGGTTGTAGGCAGCACTCTTGGCATCGAGCCGCCAGGCGAACCACATGCGCTGCTGGGCATATGACAGCGCGTCACGGGCAGCAACCTCGACCCCAGGCGCGATCGGCAACAGCGCGAA > NC_002947/4793634‑4793782 GCCTGGGGTCGAGGTTGCTGCCCGTGACGCGCTGTCATATGCCCAGCAGCGCATGTGGTTCGCCTGGCGGCTCGATGCCAAGAGTGCTGCCTACAACCTGCCCATGGCAGTCAAGCTCAAGGGGCCGATAGCGCCTGAGGCCTTGCAGCA < 2:730088/150‑1GCCTGGGGTCGAGGTTGCTGCCCGTGACGCGCTGTCATATGCCCAGCAGCGCATGTGGTGCGCCTGGCGGCTCGATGCCAAGAGGGCTGCCTACAACCTGCCCATGACAGTCAAGCTCAAGGGGCCGATAGCCCCTGCGGCCTTGCAGCA > 2:181336/1‑150 CCTGGGGTCGAGGTTGCTGCCCGTGACGCGCTGTCATATGCCCAGCAGCGCATGTGGTTCGCCTGGCGGCTCGATGCCAAGAGTGCTGCCTACAACCTGCCCATGGCAGTCAAGCTCAAGGGGCCGATAGCGCCTGAGGCCTTGCAGCAG < 1:476236/150‑1 CCTGGGGTCGAGGTTGCTGCCCGTGACGCGCTGTCATATGCCCAGCAGCGCATGTGGTTCGCCTGGCGGCTCGATGCCAAGAGTGCTGCCTACAACCTGCCCATGGCAGTCAAGCTCAAGGGGCCGATAGCGCCTGAGGCCTTGCAGCAG < 1:759167/150‑1 CTGGGGTCGAGGTTGCTGCCCGTGACGCGCTGTCATATGCCCAGCAGCGCATGTGGTTCGCCTGGCGGCTCGATGCCAAGAGTGCTGCCTACAACCTGCCCATGGCAGTCAAGCTCAAGGGGCCGATAGCGCCTGAGGCCTTGCAGCAGG > 2:736563/1‑150 TGCCCGTGACGCGCTGTCATATGCCCAGCAGCGCATGTGGTTCGCCTGGCGGCTCGATGCCAAGAGTGCTGCCTACAACCTGCCCATGGCAGTCAAGCTCAAGGGGCCGATAGCGCCTGCTGCAAGGCCTCAGGCGCTATCGGCCCCTTG < 2:431023/150‑1 GATAGCGCCTGAGGCCTTGCAGCAGGCGCTATCGGCCCCTTGAGCTTGACTGCCATGGGCAGGTTGTAGGCAGCACTCTTGGCATCGAGCCGCCAGGCGAACCACATGCGCTGCTGGGCATATGACAGCGCGTCACGGGCAGCAACCTCG > 1:476624/1‑150 TAGCGCCTGAGGCCTTGCAGCAGGCGCTATCGGCCCCTTGAGCTTGACTGCCATGGGCAGGTTGTAGGCAGCACTCTTGGCATCGAGCCGCCAGGCGAA > 1:312559/1‑99 TAGCGCCTGAGGCCTTGCAGCAGGCGCTATCGGCCCCTTGAGCTTGACTGCCATGGGCAGGTTGTAGGCAGCACTCTTGGCATCGAGCCGCCAGGCGAA < 2:312559/99‑1 GCCTTGCAGCAGGCGCTATCGGCCCCTTGAGCTTGACTGCCATGGGCAGGTTGTAGGCAGCACTCTTGGCATCGAGCCGCCAGGCGAACCACATGCGCTGCTGGGCATATGACAGCGCGTCACGGGCAGC < 1:1952239/130‑1 GCCTTGCAGCAGGCGCTATCGGCCCCTTGAGCTTGACTGCCATGGGCAGGTTGTAGGCAGCACTCTTGGCATCGAGCCGCCAGGCGAACCACATGCGCTGCTGGGCATATGACAGCGCGTCACGGGCAGC > 2:1952239/1‑130 GGCGGTATCCGCCCCTTGAGCTTGACTGCCATGGGCAGGTTTTAGGCAGCACTATTGGCATCGAGCCGCCAGGCGAAGCACATGCGCTGCTGGGCATATGACAGCGCGTCACGGGCAGCAACCTCGACCCCAGGCGCGATCGGCAACAGC < 2:1718885/150‑1 GCGCTATCGGCCCCTTGAGCTTGACTGCCATGGGCAGGTTGTAGGCAGCACTCTTGGCATCGAGCCGCCAGGCGAACCACATGCGCTGCTGGGCATATGACAGCGCGTCACGG > 2:758757/1‑113 GCGCTATCGGCCCCTTGAGCTTGACTGCCATGGGCAGGTTGTAGGCAGCACTCTTGGCATCGAGCCGCCAGGCGAACCACATGCGCTGCTGGGCATATGACAGCGCGTCACGG < 1:758757/113‑1 CGCTATCGGCCCCTTGAGCTTGACTGCCATGGGCAGGTTGTAGGCAGCACTCTTGGCATCGAGCCGCCAGGCGAACCACATGCGCTGCTGGGCATATGACAGCGCGTCACGGGCAGCAACCTCGACCCCAGGCGCGATCGGCAACAGCGC < 1:1950740/150‑1 CGCTATCGGCCCCTTGAGCTTGACTGCCATGGGCAGGTTGTAGGCAGCACTCTTGGCATCGAGCCGCCAGGCGAACCACATGCGCTGCTGGGCATATGACAGCGCGTCACGGGCAGCAACCTCGACCCCAGGCGCGATCGGCAACAGCGC < 2:2204965/150‑1 CTATCGGCCCCTTGAGCTTGACTGCCATGGGCAGGTTGTAGGCAGCACTCTTGGCATCGAGCCGCCAGGCGAACCACATGCGCTGCTGGGCATATGACAGCGCGTCACGGGCAGCAACCTCGACCCCAGGCGCGATCGGCAACAGCGCGA > 1:1713079/1‑150 TATCGGCCCCTTGAGCTTGACTGCCATGGGCAGGTTGTAGGCAGCACTCTTGGCATCGAGCCGCCAGGCGAACCACATGCGCTGCTGGGCATATGACAGCGCGTCACGGGCAGCAACCTCGACCCCAGGCGCGATCGGCAACAGCGCGAA < 2:476624/150‑1 TATCGGCCCCTTGAGCTTGACTGCCATGGGCAGGTTGTAGGCAGCACTCTTGGCATCGAGCCGCCAGGCGAACCACATGCGCTGCTGGGCATATGACAGCGCGTCACGGGCAGCAACCTCGACCCCAGGCGCGATCGGCAACAGCGCGAA > 1:812706/1‑150 TATCGGCCCCTTGAGCTTGACTGCCATGGGCAGGTTGTAGGCAGCACTCTTGGCATCGAGCCGCCAGGCGAACCACATGCGCTGCTGGGCATATGACAGCGCGTCACGGGCAGCAACCTCGACCCCAGGCGCGATCGGCAACAGCGCGAA > 2:764059/1‑150 GCCTGGGGTCGAGGTTGCTGCCCGTGACGCGCTGTCATATGCCCAGCAGCGCATGTGGTTCGCCTGGCGGCTCGATGCCAAGAGTGCTGCCTACAACCTGCCCATGGCAGTCAAGCTCAAGGGGCCGATAGCGCCTGAGGCCTTGCAGCAGGCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4793762‑4793607‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggcgctATCGGCCCCTTGAGCTTGACTGCCATGGGCAGGTTGTAGGCAGCACTCTTGGCATCGAGCCGCCAGGCGAACCACATGCGCTGCTGGGCATATGACAGCGCGTCACGGGCAGCAACCTCGACCCCAGGCGCGATCGGCAACAGCGCGAA > NC_002947/4793634‑4793782 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |