| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5698783 = | 65 (0.740) | 9 (0.120) | 9/214 | NT | 13.8% | intergenic (+17/‑150) | hslU/PP_5002 | protease HslVU ATPase subunit/hypothetical protein |
| ? | NC_002947 | 5698866 = | 56 (0.740) | intergenic (+100/‑67) | hslU/PP_5002 | protease HslVU ATPase subunit/hypothetical protein | |||||
AGGCAGGCGGGCCATGGGCAGAATCTCTCGGGAGCTGATGAAGCACAGCTTCCAGCTTATGGGGGAGGGATTCAAGGGCCTCTTCGCGGGCAAGCCCGCCCCCGCACGGATCACCACAGGCCCAAGGGTTGTGGTGGCGCGTGCAGGAGCGGGCTTGCCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5698947‑5698783‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgggcttgcccgcgaaGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCGCCTGCCTACCGCCATCAACCTGCACAAAGCCTCCAAGACCCTCAGCCTCACCTACGCACCCGGCGAGGTCTAC > NC_002947/5698866‑5699013 AGGCAGGCGGGCCATGGGCAGAATCTCTCGGGAGCTGATGAAGCACAGCTTCCAGCTTATGGGGGAGGGTGGCAAGGGCCTCTTCGCGGGCAAGCCCGCCCCCGCACGGATCACCACAGGCCCAAGGGTTGTGGTGGCGCGTGCAGGAGC > 1:754437/1‑150 GGGCCATGGGCAGAATCTCTCGGGAGCTGATGAAGCACAGCTTCCAGCTTATGGGGGAGGGATTCAAGGGCCTCTTCGCGGGCAAGCCCGCCCCCGCACGGATCACCACAGGCCCAAGGGTTGTGGTGGCGCGTGCAGGAGCGGGCTTGC < 2:600589/150‑1 GGGCCATGGGCAGAATCTCTCGGGAGCTGATGAAGCACAGCTTCCAGCTTATGGGGGAGGGATTCAAGGGCCTCTTCGCGGGCAAGCCCGCCCCCGCACGGATCACCACAGGCCCAAGGGTTGTGGTGGCGCGTGCAGGAGCGGGCTTGC < 1:399073/150‑1 GCCATGGGCAGAATCTCTCGGGAGCTGATGAAGCACAGCTTCCAGCTTATGGGGGAGGGATTCAAGGGCCTCTTCGCGGGCAAGCCCGCCCCCGCACGGATCACCACAGGCCCAAGGGTTGTGGTGGCGCGTGCAGGAGCGGGCTTGCCC > 2:2139507/1‑150 TGGGCAGAATCTCTCGGGAGCTGATGAAGCACAGCTTCCAGCTTATGGGGGAGGGATTCAAGGGCCTCTTCGCGGGCAAGCCCGCCCCCGCACGGATCACCACAGGCCCAAGGGTTGTGGTGGCGCGTGCAGGAGCGGGCTTGCCCGCGA > 1:1290729/1‑150 GCTGATGAAGCACAGCTTCCAGCTTATGGGGGAGGGATTCAAGGGCCTCTTCGCGGGCAAGCCCGCCCCCGCACGGATCACCACAGGCCCAAGGGTTGTGGTGGCGCGTGCAGGAGCGGGCTTGCCC > 2:1322999/1‑127 GCTGATGAAGCACAGCTTCCAGCTTATGGGGGAGGGATTCAAGGGCCTCTTCGCGGGCAAGCCCGCCCCCGCACGGATCACCACAGGCCCAAGGGTTGTGGTGGCGCGTGCAGGAGCGGGCTTGCCC < 1:1322999/127‑1 TGAAGCACAGCTTCCAGCTTATGGGGGAGGGATTCAAGGGCCTCTTCGCGGGCAAGCCCGCCCCCGCACGGATCACCACAGGCCCAAGGGTTGTGGTGGCGCGTGCAGGAGCGGG < 2:1345081/115‑1 TGAAGCACAGCTTCCAGCTTATGGGGGAGGGATTCAAGGGCCTCTTCGCGGGCAAGCCCGCCCCCGCACGGATCACCACAGGCCCAAGGGTTGTGGTGGCGCGTGCAGGAGCGGG > 1:1345081/1‑115 CCTCTTCGCGGGCAAGCCCGCCCCCGCACGGATCACCACAGGCCCAAGGGTTGTGGTGGCGCGTGCAGGAGCGGGCT > 2:1553766/1‑77 CCTCTTCGCGGGCAAGCCCGCCCCCGCACGGATCACCACAGGCCCAAGGGTTGTGGTGGCGCGTGCAGGAGCGGGCT < 1:1553766/77‑1 GCCCCCGCACGGATCACCACAGGCCCAAGGGTTGTGGTGGCGCGTGCAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCGCCTGCCT > 1:1324695/1‑150 CCCCGCACGGATCACCACAGGCCCAAGGGTTGTGGTGGCGCGTGCAGGAGCGGGCTTGCCCGC > 1:1486542/1‑63 CCCCGCACGGATCACCACAGGCCCAAGGGTTGTGGTGGCGCGTGCAGGAGCGGGCTTGCCCGC < 2:1486542/63‑1 GCACGGATCACCACAGGCCCAAGGGTTGTGGTGGCGCGTGCAGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCGCCTGCCTACCGCC > 2:177673/1‑150 CGGATCACCACAGGCCCAAGGGTTGTGGTGGCGCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCGCCTGCCTACCGCCATC > 1:338202/1‑150 GATCACCACAGGCCCAAGGGTTGTGGTGGCGCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCGCCTGCCTACCGCCATCAA < 2:338202/150‑1 CACAGGCCCAAGGGTTGTGGTGGCGCGTGCAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGC < 2:1835638/116‑1 CACAGGCCCAAGGGTTGTGGTGGCGCGTGCAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGC > 1:1835638/1‑116 GCCCAAGGGTTGTGGTGGCGCGTGCAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCC > 2:2251627/1‑99 GCCCAAGGGTTGTGGTGGCGCGTGCAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCC < 1:2251627/99‑1 AGGGTTGTGGTGGCGCGTGCAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCGCCTGCCTACCGCCATCAACCTGCACAAAGCCTCC < 2:1324695/150‑1 GCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCGCCTGCCTACCGCCATCAACCTGCACAAAGCCTCCAAGACCCTCAGCCTCACCTACGCA > 1:527940/1‑150 GCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCGCCTGCCTACCGCCATCAACCTGCACAAAGCCTCCAAGACCCTCAGCCTCACCTACGCACCCG > 2:769557/1‑150 GCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCGCCTGCCTACCGCCATCAACCTGCACAAAGCCTCCAAGACCCTCACCCTCACCTACGCACCCG > 1:1427168/1‑150 GCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATC < 1:1204738/59‑1 GCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATC > 2:1204738/1‑59 CTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCGCCTGCCTACCGCCATCAACCTGCACAAAGCCTCCAAGACCCTCAGCCTCACCTACGCACCCGG > 2:472120/1‑150 TTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCGCCTGCCTACCGCCATCAACCTGCACAAAGCCTCCAAGACCCTCAGCCTCACCTACGCACCCGGC > 2:1847433/1‑150 CCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCGCCTGCCTACCGCCATCAACCTGCACAAAGCCTCCAAGACCCTCAGCCTCACCTACGCACCCGGCGAG < 1:769557/150‑1 CCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCGCCTGCCTACCGCCATCAACCTGCACAAAGCCTCCAAGACCCTCAGCCTCACCTACGCACCCGGCGAGG > 1:2008939/1‑150 CCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCGCCTGCCTACCGCCATCAACCTGCACAAAGCCTCCAAGACCCTCAGCCTCACCTACGCACCCGGCGAGG > 2:995793/1‑150 CGCGAAGATGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCGCCTGCCTACCGCCATCAACCTGCACAAAGCCTCCAAGACCCTCAGCCTCACATACGCACCCGGCGAGGT > 1:1735210/1‑150 GCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCGCCTGCCTACCGCCATCAACCTGCACAAAGCCTCCAAGACCCTCAGCCTCACCTACGCACCCGGCGAGGTC < 1:246981/150‑1 AAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCGCCTGCCTACCGCCATCAACCTGCACAAAGCCTCCAAGACCCTCAGCCTCACCTACGCACCCGGCGAGGTCTAC < 1:240881/150‑1 AAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCGCCTGCCTACCGCCATCAACCTGCACAAAGCCTCCAAGACCCTCAGCCTCACCTACGCACCCGGCGAGGTCTAC > 1:1499118/1‑150 AGGCAGGCGGGCCATGGGCAGAATCTCTCGGGAGCTGATGAAGCACAGCTTCCAGCTTATGGGGGAGGGATTCAAGGGCCTCTTCGCGGGCAAGCCCGCCCCCGCACGGATCACCACAGGCCCAAGGGTTGTGGTGGCGCGTGCAGGAGCGGGCTTGCCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5698947‑5698783‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgggcttgcccgcgaaGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCGCCTGCCTACCGCCATCAACCTGCACAAAGCCTCCAAGACCCTCAGCCTCACCTACGCACCCGGCGAGGTCTAC > NC_002947/5698866‑5699013 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |