| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 6146542 = | 96 (1.090) | 11 (0.130) | 9/246 | NT | 11.1% | coding (865/1023 nt) | PP_5392 | WD40/YVTN repeat‑containing protein |
| ? | NC_002947 | 6146577 = | 81 (0.930) | coding (830/1023 nt) | PP_5392 | WD40/YVTN repeat‑containing protein | |||||
CGCCAATCCAGATGATGGCCACCGTTGACGGTCGCCAGGTCTATGTCGCGAACCAGGGCAGCGGCCAGAATCCGGACGACCGAGTCTCCATCGTAGATATCCAGACGCGTAGCAGCCTGGGCACCGTGACCACCGGCAAGGGTGCCCATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6146691‑6146542‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gCTGCTACGCGTCTGGATATCTACGATGGAGACTCGGTCGTCCGGATTCTGGCCGCTGCCCTGGTTCGCGACATAGACCTGGCGACCGTCAACGGTGGCCATCATCTGGATTGGCGT > NC_002947/6146577‑6146692 CGCCAATCCAGATGATGGCCACCGTTGACGGTCGCCAGGTCTATGTCGCGAACCAGGGCAGCGGCCAGAATCCGGACGACCGAGTCTCCATCGTAGATATCCAGACGCGTAGCAGCCTGGGCACCGTGACCACCGGCAAGGGTGCCCATG < 1:1998449/150‑1 AGCCTGGGCACCGTGACCACCGGCAAGGGTGCCCATGCTGCTACGCGTCTGGATATCTACGATGGAGACTCGGTCGTCCGGATTCTGGCCGCTGCCCTGGTTCGCGACATAGACCTGGCGACCGTCAACGGTGGCCATC < 1:886078/139‑1 AGCCTGGGCACCGTGACCACCGGCAAGGGTGCCCATGCTGCTACGCGTCTGGATATCTACGATGGAGACTCGGTCGTCCGGATTCTGGCCGCTGCCCTGGTTCGCGACATAGACCTGGCGACCGTCAACGGTGGCCATC > 2:886078/1‑139 GCCTGGGCACCGTGACCACCGGCAAGGGTGCCCATGCTGCTACGCGTCTGGATATCTACGATGGAGATTCGGTCGTCCGGA < 1:2285165/81‑1 GCCTGGGCACCGTGACCACCGGCAAGGGTGCCCATGCTGCTACGCGTCTGGATATCTACGATGGAGATTCGGTCGTCCGGA > 2:2285165/1‑81 GCCTGGGCACCGTGACCACCGGCAAGGGTGCCCATGCTGCTACGCGTCTGGATATCTACGATGGAGACTCGGTCGTCCGGATTCTGGCCGCTGCCCTGGTTCGCGACATAGACCTGGCGACCGTC < 1:1369928/125‑1 GCCTGGGCACCGTGACCACCGGCAAGGGTGCCCATGCTGCTACGCGTCTGGATATCTACGATGGAGACTCGGTCGTCCGGATTCTGGCCGCTGCCCTGGTTCGCGACATAGACCTGGCGACCGTC > 2:1369928/1‑125 CTGGGCACCGTGACCACCGGCAAGGGTGCCCAGGCTGCTACGCGTCTGGATATCTACGATGGAGACTCGGTCGTCCGGATTCTGGCCGCTGCCCTGGTTCGCGACATAGACCTGGCGACCGTCAACGGTGGCCATCATCTGGATTGGCGT > 1:1398408/1‑150 CTGGGCACCGTGACCACCGGCAAGGGTGCCCAGGCTGCTACGCGTCTGGATATCTACGATGGAGACTCGGTCGTCCGGATTCTGGCCGCTGCCCTGGTTCGCGACATAGACCTGGCGACCGTCAACGGTGG < 1:421843/131‑1 CTGGGCACCGTGACCACCGGCAAGGGTGCCCAGGCTGCTACGCGTCTGGATATCTACGATGGAGACTCGGTCGTCCGGATTCTGGCCGCTGCCCTGGTTCGCGACATAGACCTGGCGACCGTCAACGGTGG > 2:421843/1‑131 CACCGTGACCACCGGCAAGGGTGCCCAGGCTGCTACGCGTCTGGATATCTACGATGGAGACTCGGTCGTCCGGATTCTGGCCGCTGCCCTGGTTCGCGACATAGACCT < 1:811725/108‑1 CACCGTGACCACCGGCAAGGGTGCCCAGGCTGCTACGCGTCTGGATATCTACGATGGAGACTCGGTCGTCCGGATTCTGGCCGCTGCCCTGGTTCGCGACATAGACCT > 2:811725/1‑108 CGCCAATCCAGATGATGGCCACCGTTGACGGTCGCCAGGTCTATGTCGCGAACCAGGGCAGCGGCCAGAATCCGGACGACCGAGTCTCCATCGTAGATATCCAGACGCGTAGCAGCCTGGGCACCGTGACCACCGGCAAGGGTGCCCATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6146691‑6146542‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gCTGCTACGCGTCTGGATATCTACGATGGAGACTCGGTCGTCCGGATTCTGGCCGCTGCCCTGGTTCGCGACATAGACCTGGCGACCGTCAACGGTGGCCATCATCTGGATTGGCGT > NC_002947/6146577‑6146692 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |