| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 6166516 | 79 (0.900) | 4 (0.050) | 3/240 | NT | 5.1% | intergenic (‑219/‑461) | PP_5406/PP_5407 | transposase/TnsD‑like transposition protein |
| ? | NC_002947 | = 6166540 | 72 (0.840) | intergenic (‑243/‑437) | PP_5406/PP_5407 | transposase/TnsD‑like transposition protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
ATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/6166473‑6166516‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acaaAGGCCCAAGTGCGACCTTGGGCCCTTGTGGATAAGTCAGAAAAGGCACCTGACTCCTCCATTGTCTATCCCTTGCATGTGAAACGTCAAGTTTCGCACGGATTCGCTCATCCACAAGAATCTCCGCGTTATCCACAACCGGAAACGCG < NC_002947/6166540‑6166393 ATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAAGGCCCAAGTGCGACCTTGGGCCCTTGT < 1:750762/72‑1ATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAAGGCCCAAGTGCGACCTTGGGCCCTTGT > 2:750762/1‑72 tCCTTTTCTTACTTATCCACAAAGGCCCAAGTGCGACCTTGGGCCCTTGT < 1:635511/49‑1 GCCTTTTCTGACTTATCCACAAAGGCCCAAGTGCGACCTTGGGCCCTTGT > 2:635511/1‑50 ACAAAGGCCCAAGTGCGACCTTGGGCCCTTGTGGATAAGTC < 1:2022423/41‑1 ACAAAGGCCCAAGTGCGACCTTGGGCCCTTGTGGATAAGTC > 2:2022423/1‑41 AAAGGCCCAAGTGCGACCTTGGGCCCTTGTGGATAAGTCAGAAAAGGCACCTGACTCCTCCATTGTCTATCCCTTGCATGTGAAACGTCAAGTTTCGCACGGATTCGCTCATCCACAAGAATCTCCGCGTTATCCACAACCGGAAACGCG < 1:1642878/150‑1 AAAGGCCCAAGTGCGACCTTGGGCCCTTGTGGATAAGTCAGAAAAGGCACCTGACTCCTCCATTGTCTATCCCTTGCATGTGAAACGTCAAGTTTCGCACGGATTCGCTCATCCACAAGAATCTCCGCGTTATCCACAACCGGAAACGCG > 1:1700197/1‑150 AAAGGCCCAAGTGCGACCTTGGGCCCTTGTGGATAAGTCAGAAAAGGCACCTGACTCCTCCATTGTCTATCCCTTGCATGTGAAACGTCAAGTTTCGCACGGATTCGCTCATCCACAAGAATCTCCGCGTTATCCACAACCGGAAACGCG > 2:754310/1‑150 ATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/6166473‑6166516‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acaaAGGCCCAAGTGCGACCTTGGGCCCTTGTGGATAAGTCAGAAAAGGCACCTGACTCCTCCATTGTCTATCCCTTGCATGTGAAACGTCAAGTTTCGCACGGATTCGCTCATCCACAAGAATCTCCGCGTTATCCACAACCGGAAACGCG < NC_002947/6166540‑6166393 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |