New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 6166516	79 (0.900)	4 (0.050)	3/240	NT	5.1%	intergenic (‑219/‑461)	PP_5406/PP_5407	transposase/TnsD‑like transposition protein
	?	NC_002947	= 6166540	72 (0.840)					intergenic (‑243/‑437)	PP_5406/PP_5407	transposase/TnsD‑like transposition protein
Rejected: Coverage evenness skew score above cutoff.

CGCGTTTCCGGTTGTGGATAACGCGGAGATTCTTGTGGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGCCCACGCTCACGAGCCCTTCTCTCAGGCTTCGCTGACGCAGCGCTTTCTGGC  >  NC_002947/6166393‑6166688                                                                                                                                                    |                                                                                                                                                     cgcgTTTCCGGTTGTGGATAACGCGGAGATTCTTGTGGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCttt                                                                                                                                                    <  1:1700197/150‑1 (MQ=255) cgcgTTTCCGGTTGTGGATAACGCGGAGATTCTTGTGGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCttt                                                                                                                                                    <  2:754310/150‑1 (MQ=255) cgcgTTTCCGGTTGTGGATAACGCGGAGATTCTTGTGGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCttt                                                                                                                                                    >  1:1642878/1‑150 (MQ=255)       tCCGGTTGTGGATAACGCGGAGATTCTTGTGGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTAt                                                                                                                                              >  1:1045366/1‑150 (MQ=255)               tgGATAACGCGGAGATTCTTGTGGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTc                                                                                                                                      <  1:979457/150‑1 (MQ=255)                 gATAACGCGGAGCTTCTTGTGGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGGTTTCCa                                                                                                                                    >  1:608471/1‑150 (MQ=255)                    aaCGCGGAGATTCTTGTGGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCt                                                                                                                                                <  1:540163/135‑1 (MQ=255)                    aaCGCGGAGATTCTTGTGGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCt                                                                                                                                                >  2:540163/1‑135 (MQ=255)                       gcgGAGATTCTTGTGGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGctc                                                                                                                              >  1:1765834/1‑150 (MQ=255)                          gagaTTCTTGTGGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCg                                                                                                                           <  2:772782/150‑1 (MQ=255)                            gaTTCTTGTGGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGtt                                                                                                                         >  1:271656/1‑150 (MQ=255)                            gaTTCTTGTGGATGAGCGAATCCGTGCGAAACTTGACGTTACACATGCAAGCCATAGACAATTGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGtt                                                                                                                         <  1:2273154/150‑1 (MQ=255)                               tCTTGTGGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTtag                                                                                                                      <  2:608471/150‑1 (MQ=255)                                 ttGTGGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTAt                                                                                                                                              >  2:1994211/1‑124 (MQ=255)                                 ttGTGGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTAt                                                                                                                                              <  1:1994211/124‑1 (MQ=255)                                   gtgGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTtagctag                                                                                                                  <  1:1580036/150‑1 (MQ=255)                                      gATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTg                                                                                                               >  1:1602847/1‑150 (MQ=255)                                         gAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGCTAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTgtcg                                                                                                            >  1:2221526/1‑150 (MQ=255)                                           gCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTgtcgtc                                                                                                          >  1:961886/1‑150 (MQ=255)                                               aTCCGTGAGAAACTTGACGTTTCACATGCAAGTGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACACATGCTCAAACTCGCACATGGGCCTTTGTCTATCTAATTTCCAGCGCTCTCGTTTAGCTAGCTGTCCTCTgta                                                                                                      <  2:479017/150‑3 (MQ=255)                                                  cGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAAttt                                                                                                   <  1:985280/150‑1 (MQ=255)                                                   gTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAAtttc                                                                                                  <  2:1358544/150‑1 (MQ=255)                                                      cGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAAtttcttt                                                                                               <  2:1602847/150‑1 (MQ=255)                                                            ttGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAg                                                                                         >  1:2061436/1‑150 (MQ=255)                                                                cGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCATTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCt                                                                                     >  1:572348/1‑150 (MQ=255)                                                                 gTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTtagct                                                                                                                    >  1:954369/1‑118 (MQ=255)                                                                 gTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTtagct                                                                                                                    <  2:954369/118‑1 (MQ=255)                                                                 gTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGAATTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTa                                                                                    >  1:1504825/1‑150 (MQ=255)                                                                   ttCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTAcc                                                                                  <  2:271656/150‑1 (MQ=255)                                                                        aTGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAgg                                                                             >  2:929287/1‑150 (MQ=255)                                                                           cAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGt                                                                          >  1:1090304/1‑150 (MQ=255)                                                                           cAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGt                                                                          >  1:423060/1‑150 (MQ=255)                                                                            aaGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGtc                                                                         >  1:686427/1‑150 (MQ=255)                                                                             aGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTAGTTAGGTCTAc                                                                                   >  1:1108202/1‑139 (MQ=255)                                                                             aGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTAGTTAGGTCTAc                                                                                   <  2:1108202/139‑1 (MQ=255)                                                                                 aTAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTccgc                                                                    >  2:449208/1‑150 (MQ=255)                                                                                      cAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGAtt                                                               <  2:423060/150‑1 (MQ=255)                                                                                       aaTGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTta                                                                                                                       >  1:166730/1‑93 (MQ=255)                                                                                       aaTGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTta                                                                                                                       <  2:166730/93‑1 (MQ=255)                                                                                       aaTGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAACTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATtg                                                              >  1:1676288/1‑150 (MQ=255)                                                                                            aggagTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATc                                                         >  1:1090933/1‑150 (MQ=255)                                                                                             ggactaaGGTGCCACTTACGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCt                                                        >  2:513513/7‑150 (MQ=255)                                                                                              gagTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTAc                                                                                   >  1:1506781/1‑122 (MQ=255)                                                                                              gagTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTAc                                                                                   <  2:1506781/122‑1 (MQ=255)                                                                                              gagTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCtt                                                       <  2:961886/150‑1 (MQ=255)                                                                                                 tCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTTcc                                                    <  2:1045366/150‑1 (MQ=255)                                                                                                 tCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGcc                                                    <  1:449208/150‑1 (MQ=255)                                                                                                    ggTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGCCCAc                                                 <  1:1370057/150‑1 (MQ=255)                                                                                                    ggTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGCCCAc                                                 <  2:1642878/150‑1 (MQ=255)                                                                                                    ggTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGCCTATCTGATTTCCAGCGCTCTCACCCAGGAACCAACCGTCTGAATGTCTTTGGTTGGGTCTCCCTTACGCGTCTCCTCCGATTGTGATCTTGCCCAc                                                 >  1:632852/1‑150 (MQ=255)                                                                                                     gTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGCCCACg                                                >  1:2299029/1‑150 (MQ=255)                                                                                                     gTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGCCCACg                                                <  2:2221526/150‑1 (MQ=255)                                                                                                      tGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTATGTCTACCTTAGGCGtct                                                                        <  1:1450629/125‑1 (MQ=255)                                                                                                      tGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTATGTCTACCTTAGGCGtct                                                                        >  2:1450629/1‑125 (MQ=255)                                                                                                               tGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGc                                                     >  1:1539364/1‑135 (MQ=255)                                                                                                               tGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGCCCACGCTCACGAGcc                                      >  1:641889/1‑150 (MQ=255)                                                                                                               tGACTTATACAGAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGCCCACGCTCACGAGcc                                      <  1:1851700/150‑1 (MQ=255)                                                                                                               tGACCTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGc                                                     <  2:1539364/135‑1 (MQ=255)                                                                                                                gACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGt                                                                                                                                                  >  1:2022423/1‑41 (MQ=255)                                                                                                                gACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGt                                                                                                                                                  <  2:2022423/41‑1 (MQ=255)                                                                                                                   ttATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGAtt                                                               <  1:305176/121‑1 (MQ=255)                                                                                                                   ttATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGAtt                                                               >  2:305176/1‑121 (MQ=255)                                                                                                                   ttATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGCCCACGCTCACGAGCCCTtc                                  <  1:929287/150‑1 (MQ=255)                                                                                                                     atacacaAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCAACTGTACGCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACATTAGGCGTCTCCGCCGATTGTGATCTTGCCCACGCTCACGAGCCCTtctc                                >  1:1918038/4‑150 (MQ=255)                                                                                                                     aTCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCt                                                                                                         <  2:162557/77‑1 (MQ=255)                                                                                                                     aTCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCt                                                                                                         >  1:162557/1‑77 (MQ=255)                                                                                                                       ccACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGCCCCCGCTCACGAGCCCTtctctc                              <  2:686427/150‑1 (MQ=255)                                                                                                                       ccACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTATACCTTAGCCGTCTACACCGATTGTTATCTTGCCCACGCTCAGGAGCACTtctctt                              >  2:2134628/1‑149 (MQ=255)                                                                                                                        cacaAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTta                                                                                                                       >  2:832531/1‑60 (MQ=255)                                                                                                                        cacaAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTta                                                                                                                       <  1:832531/60‑1 (MQ=255)                                                                                                                        cacaAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGCCCACGCTCACGAGCCCTTCTCTCa                             >  2:705140/1‑150 (MQ=255)                                                                                                                           aaGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAAtttcttt                                                                                               >  1:791221/1‑81 (MQ=255)                                                                                                                           aaGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAAtttcttt                                                                                               <  2:791221/81‑1 (MQ=255)                                                                                                                           aaGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTa                                                                                          <  1:1407537/86‑1 (MQ=255)                                                                                                                           aaGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTa                                                                                          >  2:1407537/1‑86 (MQ=255)                                                                                                                                cccAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGCCCACGCTCACGAGCCCTTCTCTCAGGCTTCGc                     <  2:1090933/150‑1 (MQ=255)                                                                                                                                 ccACGGTAGCACTTTTTCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGCCCACGCTCACGAGCCCTTCTCTCAGGCTTCGCt                    <  2:1918038/150‑1 (MQ=255)                                                                                                                                 ccAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGCCCACGCTCACGAGCCCTTCTCTCAGGCTTCGCt                    >  1:2282929/1‑150 (MQ=255)                                                                                                                                 ccAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCGCCGCCGATTGTGATCTTGCCCACGCTCACGAGCCCTTCTCTCAGGCTTCGCt                    <  2:1958381/150‑1 (MQ=255)                                                                                                                                   aaGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGCCCACGCTCACGAGCCCTTCTCTCAGGCTTCGCTGa                  <  2:2061436/150‑1 (MQ=255)                                                                                                                                      gTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGCCCACGCTCACGAGCCCTTCTCTCAGGCTTCGCTGACGc               >  1:1692098/1‑150 (MQ=255)                                                                                                                                         gCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGCCCACGCTCACGAGCCCTTCTCTCAGGCTTCGCTGACGCAgc            >  2:2198042/1‑150 (MQ=255)                                                                                                                                                  ccTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGCCCACGCTCACGAGCCCTTCTCTCAGGCTTCGCTGACGCAGCGCTTTCTgg   <  2:1504825/150‑1 (MQ=255)                                                                                                                                                  ccTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGCCCACGCTCACGAGCCCTTCTCTCAGGCTTCGCTGACGCAGCGCTTTCTgg   <  2:2282202/150‑1 (MQ=255)                                                                                                                                                   cTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGCCCACGCTCACGAGCCCTTCTCTCAGGCTTCGCTGACGCAGCGCTTTCTGGc  >  1:2231698/1‑150 (MQ=255)                                                                                                                                                    |                                                                                                                                                     CGCGTTTCCGGTTGTGGATAACGCGGAGATTCTTGTGGATGAGCGAATCCGTGCGAAACTTGACGTTTCACATGCAAGGGATAGACAATGGAGGAGTCAGGTGCCTTTTCTGACTTATCCACAAGGGCCCAAGGTCGCACTTGGGCCTTTGTCTATCTGATTTCCAGCGCTCTCGTTTAGCTAGCTGTCGTCTGAATTTCTTTCGTTAGGTCTACCTTAGGCGTCTCCGCCGATTGTGATCTTGCCCACGCTCACGAGCCCTTCTCTCAGGCTTCGCTGACGCAGCGCTTTCTGGC  >  NC_002947/6166393‑6166688

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.