New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1570443 =37 (0.420)6 (0.090) 6/196 NT 15.3% intergenic (+9/‑179) pcaF‑I/pcaT beta‑ketoadipyl‑CoA thiolase/alpha‑ketoglutarate permease
?NC_002947 1570521 = 37 (0.530)intergenic (+87/‑101) pcaF‑I/pcaT beta‑ketoadipyl‑CoA thiolase/alpha‑ketoglutarate permease

Only 100 of 110 total aligned reads displayed.

CCACCCCCTGGGCATGAGCGGTGCACGCCTGGTACTGACTGCGTTGCACCAGCTGGAGAAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTAT  >  NC_002947/1570296‑1570582
                                                                                                                                                   |                                                                                                                                           
ccACCCCCTGGGCATGAGCGGTGCACGCCTGGTACTGACTGCGTTGCACCAGCTGGAGAAGAGTGGCGGTCGCAAGACCCCAGTCACAGAATGCGATGTTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGC                                                                                                                                           >  1:1112558‑M1/1‑150 (MQ=255)
ccACCCCCTGGGCATGAGCGGTGCACGCCTGGTACTGACTGCGTTGCACCAGCTGGAGAAGAGTGGCAGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGC                                                                                                                                           <  1:1974753‑M1/150‑1 (MQ=255)
agatgcgcttgctgtgttcttcgccggtgtaataggttgaggtcatgacgggtttactcctggagggtcctaggtagttctagacatacctagtaacacactcgttccgctatcgggctggcaatgggccttatgtctcacaggagaGGc                                                                                                                                           >  2:2171244‑M1/148‑150 (MQ=255)
 cACCCCCTGGGCATGAGCGGTGCACGCCTGGTACTGACTGCGTTGCACCAGCTGGAGAAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCC                                                                                                                                          <  1:436924‑M1/150‑1 (MQ=255)
  aCCCCCTGGGCATGAGCGGTGCACGCCTGGTACTGACTGCGTTGCACCAGCTGGAGAAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCT                                                                                                                                         <  2:1458693‑M1/150‑1 (MQ=255)
   cccccTGGGCATGAGCGGTGCACGCCTGGTACTGACTGCGTTGCACCAGCTGGAGAAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTC                                                                                                                                        <  2:1269226‑M1/150‑1 (MQ=255)
    gcgcttgctgcgttcttcgccggtgtaataggttgaggtcatgacgggtttactcctggagggtcctaggtagttctagacatacctagtaacacactcgttccgctatcgggctggcaatgggccttatgtctcacaggagaGGCctct                                                                                                                                       <  2:1088024‑M1/7‑1 (MQ=255)
      ccTGGGCATGAGCGGTGCACGCCTGGTACTGACTGCGTTGCACCAGCTGGAGAAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTC                                                                                                                                     <  1:441000‑M1/150‑1 (MQ=255)
        tGGGCATGAGCGGTGCACGCCTGGTACTGACTGCGTTGCACCAGCTGGAGAAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGC                                                                                                                                   >  1:2327010‑M1/1‑150 (MQ=255)
          ggCATGAGCGGTGCACGCCTGGTACTGACTGCGTTGCGCCAGCTGGAGAAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGG                                                                                                                                 <  2:1099642‑M1/150‑1 (MQ=255)
          ggCATGAGCGGTGCACGCCTGGTACTGACTGCGTTGCACCAGCTGGAGAAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGG                                                                                                                                 <  1:681870‑M1/150‑1 (MQ=255)
          ggCATGAGCGGTGCACGCCTGGTACTGACTGCGTTGCACCAGCTGGAGAAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGG                                                                                                                                 <  2:864126‑M1/150‑1 (MQ=255)
          ggCATGAGCGGTGCACGCCTGGTACTGACTGCGTTGCACCAGCTGGAGAAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGG                                                                                                                                 <  2:784809‑M1/150‑1 (MQ=255)
          ggCATGAGCGGTGCACGCCTGGTACTGACTGCGTTGCACCAGCTGGAGAAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGG                                                                                                                                 <  2:2327010‑M1/150‑1 (MQ=255)
            tgcgttcttcgccggtgtaataggttgaggtcatgacgggtttactcctggagggtcctaggtagttctagacatacctagtaacacactcgttccgctatcgggctggcaatgggccttatgtctcacaggagaGGCCTCTTCGCgggg                                                                                                                               <  1:1147819‑M1/15‑1 (MQ=255)
                ttcttcgccggtgtaataggttgaggtcatgacgggtttactcctggagggtcctaggtagttctagacatacctagtaacacactcgttccgctatcgggctggcaatgggccttatgtctcacaggagaGGCCTCTTCGCGGGGAAg                                                                                                                            <  2:1377961‑M1/18‑1 (MQ=255)
                ttcttcgccggtgtaataggttgaggtcatgacgggtttactcctggagggtcctaggtagttctagacatacctagtaacacactcgttccgctatcgggctggcaatgggccttatgtctcacaggagaGGCCTCTTCGCGGGGAAg                                                                                                                            >  1:1377961‑M1/132‑149 (MQ=255)
                ttcttcgccggtgtaataggttgaggtcatgacgggtttactcctggagggtcctaggtagttctagacatacctagtaacacactcgttccgctatcgggctggcaatgggccttatgtctcacaggagaGGCCTCTTCGCGGGGAAGc                                                                                                                           >  1:1890410‑M1/132‑150 (MQ=255)
                   ggTGCACGCCTGGTACTGACTGCGTTGCACCAGCTGGAGAAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCG                                                                                                                        <  1:1176030‑M1/150‑1 (MQ=255)
                   ggTGCACGCCTGGTACTGACTGCGTTGCACCAGCTGGAGAAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCG                                                                                                                        <  2:1796427‑M1/150‑1 (MQ=255)
                        aCGCCTGGTACTGACTGCGTTGCACCAGCTGGAGAAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGGCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCa                                                                                                                   >  1:1677499/1‑150 (MQ=255)
                            cTGGTACTGACTGCGTTGCACCAGCTGGAGAAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAg                                                                                                               <  1:197652/150‑1 (MQ=255)
                                    gactgCGTTGCACCAGCTGGAGAAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCAc                                                                                                       <  1:1584363/150‑1 (MQ=255)
                                       tgCGTTGCACCAGCTGGAGAAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGG                                                                                                                                 <  2:39069‑M1/121‑1 (MQ=255)
                                       tgCGTTGCACCAGCTGGAGAAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGG                                                                                                                                 >  1:39069‑M1/1‑121 (MQ=255)
                                       tgCGTTGCACCAGCTGGAGAAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGCGGAAGCCCGCCCCAACAGGGATCCACGCa                                                                                                    >  1:694132/1‑150 (MQ=255)
                                        gCGTTGCACCAGCTGGAGAAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCaa                                                                                                   >  2:2224666/1‑150 (MQ=255)
                                         cGTTGCACCAGCTGGAGAAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAAt                                                                                                  >  1:1014493/1‑150 (MQ=255)
                                            tGCACCAGCTGGAGAAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCAc                                                                                               <  2:1014493/150‑1 (MQ=255)
                                               aCCAGCTGGAGAAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGC                                                                                                                                           <  1:1140330‑M1/103‑1 (MQ=255)
                                               aCCAGCTGGAGAAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGC                                                                                                                                           >  2:1140330‑M1/1‑103 (MQ=255)
                                                  aGCTGGAGAAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAAt                                                                                                  >  1:1679678/1‑141 (MQ=255)
                                                  aGCTGGAGAAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGg                                                                                         >  2:452451‑M2/1‑149 (MQ=255)
                                                  aGCTGGAGAAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCACCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAAt                                                                                                  <  2:1679678/141‑1 (MQ=255)
                                                       gagaAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCca                                                                                                                  <  2:1202446‑M1/120‑3 (MQ=255)
                                                       gagaAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCca                                                                                                                  >  1:1202446‑M1/1‑118 (MQ=255)
                                                        agaagaGTGGCGGTTGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGggagcgg                                                                                   >  2:243428‑M2/1‑143 (MQ=255)
                                                        agaagaGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCcacaggtgattgcgtggatccctgttggagcgg                                                                                   <  2:1112558‑M1/150‑34 (MQ=255)
                                                        agaagaGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGggagcgg                                                                                   >  2:844690‑M2/1‑143 (MQ=255)
                                                        agaagaGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGggagcgg                                                                                   >  2:844223‑M2/1‑143 (MQ=255)
                                                         gaagaGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGggagcggg                                                                                  <  2:952672‑M2/150‑9 (MQ=255)
                                                         gaagaGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGC                                                                                                                           >  1:1995242‑M1/1‑109 (MQ=255)
                                                         gaagaGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGC                                                                                                                           <  2:1995242‑M1/109‑1 (MQ=255)
                                                         gaagaGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTAGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGggagcggg                                                                                  >  1:1195165‑M2/1‑142 (MQ=255)
                                                           agagTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCcacaggtgattgcgtggatccctgttggagcgggct                                                                                <  1:1470095‑M1/150‑37 (MQ=255)
                                                            gagTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCAGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGggagcgggctt                                                                               >  2:521866‑M2/1‑139 (MQ=255)
                                                                 ggtcctaggtagttctagacatacctagtaacacactcgttccgctatcgggctggcaatgggccttatgtctcacaggagaGGc                                                                                                                                           <  1:963764‑M1/3‑1 (MQ=255)
                                                                 ggtcctaggtagttctagacatacctagtaacacactcgttccgctatcgggctggcaatgggccttatgtctcacaggagaGGCCTCTTcgcg                                                                                                                                  >  2:473502‑M1/83‑94 (MQ=255)
                                                                 ggtcctaggtagttctagacatacctagtaacacactcgttccgctatcgggctggcaatgggccttatgtctcacaggagaGGCCTCTTcgcg                                                                                                                                  <  1:473502‑M1/12‑1 (MQ=255)
                                                                       gCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCGTCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGCTCCACGCAATCACCTGTGggagcgggcttccccgcgaaga                                                                    >  1:2224666‑M2/1‑128 (MQ=255)
                                                                       gCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGggagcgggcttccccgcgaaga                                                                    >  2:694132‑M2/1‑128 (MQ=255)
                                                                         gtagttctagacatacctagtaacacactcgttccgctatcgggctggcaatgggccttatgtctcacaggagaGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCtgtg                                                                                          <  1:701482‑M1/52‑1 (MQ=255)
                                                                         gtagttctagacatacctagtaacacactcgttccgctatcgggctggcaatgggccttatgtctcacaggagaGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCtgtg                                                                                          >  2:701482‑M1/75‑126 (MQ=255)
                                                                         aaGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGC                                                                                                                                           >  1:199296‑M1/1‑77 (MQ=255)
                                                                         aaGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGC                                                                                                                                           <  2:199296‑M1/77‑1 (MQ=255)
                                                                          aGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGGCCGAATTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGggagcgggcttccccgcgaagaggc                                                                 >  1:614740‑M2/1‑125 (MQ=255)
                                                                              cttGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAgg                                                                                                              >  2:237614/3‑101 (MQ=255)
                                                                              cttGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAgg                                                                                                              <  1:237614/99‑1 (MQ=255)
                                                                               cTGGCGACCATGTGTGTGGGTGTAGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCtctc                                                            <  1:11996/150‑1 (MQ=255)
                                                                                tagacatacctagtaacacactcgttccgctatcgggctggcaatgggccttatgtctcacaggagaGGCCTCTTCGCGGGGaa                                                                                                                             >  1:1969380‑M1/68‑84 (MQ=255)
                                                                                tagacatacctagtaacacactcgttccgctatcgggctggcaatgggccttatgtctcacaggagaGGCCTCTTCGCGGGGaa                                                                                                                             <  2:1969380‑M1/17‑1 (MQ=255)
                                                                                 ggCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGggagcgg                                                                                   >  2:936770‑M2/1‑118 (MQ=255)
                                                                                 ggCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGggagcgg                                                                                   <  1:936770‑M2/125‑8 (MQ=255)
                                                                                   cGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCtgt                                                        <  1:448186/150‑1 (MQ=255)
                                                                                     aCCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTga                                                      <  2:718233/150‑1 (MQ=255)
                                                                                      ccATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTgag                                                     >  1:926815/1‑150 (MQ=255)
                                                                                             tgtgGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCAACTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAg                                              >  2:1147819/1‑150 (MQ=255)
                                                                                              gtgGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAgg                                             <  2:1635504/150‑1 (MQ=255)
                                                                                               tgGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGc                                            <  1:1664109/150‑1 (MQ=255)
                                                                                                 ggTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCcacaggtgattgcgtggatccctgttgga                                                                                       >  1:1399074‑M1/1‑76 (MQ=255)
                                                                                                  gtgtCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGggagcgggcttccccgc                                                                         <  1:655455‑M2/118‑18 (MQ=255)
                                                                                                  gtgtCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGggagcgggcttccccgc                                                                         >  2:655455‑M2/1‑101 (MQ=255)
                                                                                                   tgtCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCAt                                        >  1:2188998/1‑150 (MQ=255)
                                                                                                    gtCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCAtt                                       <  2:2188998/150‑1 (MQ=255)
                                                                                                       ggCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGTGACATAAGGCCCAtt                                       >  1:53204/1‑147 (MQ=255)
                                                                                                       ggCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGTGACATAAGGCCCAtt                                       <  2:53204/147‑1 (MQ=255)
                                                                                                          cAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGggagcgggcttcccc                                                                           >  2:295652‑M2/1‑93 (MQ=255)
                                                                                                          cAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGggagcgggcttcccc                                                                           <  1:295652‑M2/108‑16 (MQ=255)
                                                                                                            gctatcgggctggcaatgggccttatgtctcacaggagaGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCggg                                                                                  <  2:16513‑M1/60‑1 (MQ=255)
                                                                                                            gctatcgggctggcaatgggccttatgtctcacaggagaGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCggg                                                                                  >  1:16513‑M1/40‑99 (MQ=255)
                                                                                                                         gCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGggag                                                                                      >  1:75433‑M2/1‑78 (MQ=255)
                                                                                                                         gCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGggag                                                                                      <  2:75433‑M2/82‑5 (MQ=255)
                                                                                                                           cATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAgt                >  2:2254099/1‑150 (MQ=255)
                                                                                                                           cATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAgt                <  1:2254099/150‑1 (MQ=255)
                                                                                                                           cATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAgt                >  1:1712109/1‑150 (MQ=255)
                                                                                                                            tgggccttatgtctcacaggagaGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCg                                                                                    >  1:2168099‑M1/24‑81 (MQ=255)
                                                                                                                            tgggccttatgtctcacaggagaGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCg                                                                                    <  2:2168099‑M1/58‑1 (MQ=255)
                                                                                                                             tCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAgtgt              <  2:1712109/150‑1 (MQ=255)
                                                                                                                              cGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGggagcgggcttccc                                                                            >  1:362285‑M2/1‑73 (MQ=255)
                                                                                                                              cGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGggagcgggcttccc                                                                            <  2:362285‑M2/87‑15 (MQ=255)
                                                                                                                                aGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGa                  >  2:1832100/1‑143 (MQ=255)
                                                                                                                                aGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGa                  <  1:1832100/143‑1 (MQ=255)
                                                                                                                                    ggTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTCCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTa       <  1:369949/150‑1 (MQ=255)
                                                                                                                                         gACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTAt  <  2:646187/150‑1 (MQ=255)
                                                                                                                                            cTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGt    <  1:838214/145‑1 (MQ=255)
                                                                                                                                            cTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGt    >  2:838214/1‑145 (MQ=255)
                                                                                                                                                  cGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTga                                                      <  1:894241/89‑1 (MQ=255)
                                                                                                                                                  cGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTga                                                      >  2:894241/1‑89 (MQ=255)
                                                                                                                                                  cGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGc                                            >  1:779682/1‑99 (MQ=255)
                                                                                                                                                  cGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGc                                            <  2:779682/99‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                           
CCACCCCCTGGGCATGAGCGGTGCACGCCTGGTACTGACTGCGTTGCACCAGCTGGAGAAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTAT  >  NC_002947/1570296‑1570582

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.