New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1886437 =94 (1.070)7 (0.080) 7/236 NT 7.4% coding (1062/1488 nt) rmuC DNA recombination limiting inversions protein
?NC_002947 1886464 = 86 (1.020)coding (1089/1488 nt) rmuC DNA recombination limiting inversions protein

Only 100 of 115 total aligned reads displayed.

TTGCCGGCAACGACGAAGTTGCGCTCAAGCAGCATGTGCAGTCGCTGCGCAGCCACGTCAAAGGCCTGTCGAGCAAGGACTACAGCCGCCTCGAAGGCCTGCACAGCCTGGACTTCGTGTTGTTGTTCGTGCCCATCGAGGCGGCCTTTTCGGC‑G‑GCCCTGCAGGCCGAGCCGAACCTGTTCCAGGAGGCCTTCGACCGGCAGATCGTGATTGTCAGCCCTACCACGTTGCTGGCCACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCC  >  NC_002947/1886289‑1886579
                                                                                                                                                    |                                                                                                                                                
ttGCCGGCAACGACGAAGTTGCGCTCAAGCAGCATGTGCAGTCGCTGCGCAGCCACGTCAAAGGCCTGTCGAGCAAGGACTACAGCCGCCTCGAAGGCCTGCACAGCCTGGACTTCGTGTTGTTGTTCGTGCCCATCGAGGCGGCCtttt                                                                                                                                                 >  2:695089/1‑150 (MQ=255)
ttGCCGGCAACGACGAAGTTGCGCTCAAGCAGCATGTGCAGTCGCTGCGCAGCCACGTCAAAGGCCTGTCGAGCAAGGACTACAGCCGCCTCGAAGGCCTGCACAGCCTGGACTTCGTGTTGTTGTTCGTGCCCATCGAGGCGGCCtttt                                                                                                                                                 <  2:261695/150‑1 (MQ=255)
gtagagccagccggcccgctcggcaatttcgcgggcgttctgcccttgacgctcctgcttcccttggattggtataaccagcaaggtggccagcaacgtggtagggctcacaagcacgatctgccggtcgaaggcctcctggaacaggtt                                                                                                                                                 >  1:1112644‑M1/149‑150 (MQ=255)
gtagagccagccggcccgctcggcaatttcgcgggcgttctgcccttgacgctcctgcttccacaggctgtcgataacccgcaaggtggccagcaacgtggtagggctgacaatcacgatctgccggtcgaaggcctcctggaacaggtt                                                                                                                                                 <  2:120176‑M1/2‑1 (MQ=255)
gtagagccagccggcccgctcggcaatttcgcgggcgttctgcccttgacgctcctgcttccacaggctgtcgataacccgcaaggtggccagcaacgtggtagggctgacaatcacgatctgccggtcgaaggcctcctggaacaggtt                                                                                                                                                 >  2:1706202‑M1/149‑150 (MQ=255)
gtagagccagccggcccgctcggcaatttcgagggcgttctgcccttgacgctcctgcttccacaggctgtcgataacccgcaaggtggccagcaacgtggtagggctgacaatcacgatctgcaggtcgaaggcctcctggaccaggtt                                                                                                                                                 <  2:836314‑M1/2‑1 (MQ=255)
 tagagccagccggcccgctcggcaatttcgcgggcgttctgcccttgacgctcctgcttccacaggctgtcgataacccgcaaggtggccagcaacgtggtagggctgacaatcacgatctgccggtcgaaggcctcctggaacaggTTc                                                                                                                                                >  1:1344458‑M1/148‑150 (MQ=255)
   ccGGCAACGACGAAGTTGCGCTCAAGCAGCATGTGCAGTCGCTGCGCAGCCACGTCAAAGGCCTGTCGAGCAAGGACTACAGCCGCCTCGAAGGCCTGCACAGCCTGGACATGGTGTTGTTGTTCTTGCCCATCGAGGCGGCCTTTTcgg                                                                                                                                              >  1:1903990/1‑150 (MQ=255)
           gacgaAGTTGCGCTCAAGCAGCATGTGCAGTCGCTGCGCAGCCACGTCAAAGGCCTGTCGAGCAAGGACTACAGCCGCCTCGAAGGCCTGCACAGCCTGGACTTCGTGTTGTTGTTCGTGCCCATCGAGGCGGCCTTTTCGGC‑G‑GCCCTg                                                                                                                                    >  1:2022459/1‑150 (MQ=255)
             cgaAGTTGCGCTCAAGCAGCATGTGCAGTCGCTGCGCAGCCACGTCAAAGGCCTGTCGAGCAAGGACTACAGCCGCCTCGAAGGCCTGCACAGCCTGGACTTCGTGTTGTTGTTCGTGCCCATCGAGGCGGCCTTTTCGGC‑G‑GCCCTGCa                                                                                                                                  <  2:828383/150‑1 (MQ=255)
                   tGCGCTCAAGCAGCATGTGCAGTCGCTGCGCAGCCACGTCAAAGGCCTGTCGAGCAAGGACTACAGCCGCCTCGAAGGCCTGCACAGCCTGGACTTCGTGTTGTTGTTCGTGCCCATCGAGGCGGCCTTTTCGGC‑G‑GCCCTGCAGgccga                                                                                                                            <  1:1513472/150‑1 (MQ=255)
                     cgcTCAAGCAGCATGTGCAGTCGCTGCGCAGCCACGTCAAAGGCCTGTCGAGCAAGGACTACAGCCGCCTCGAAGGCCTGCACAGCCTGGACTTCGTGTTGTTGTTCGTGCCCATCGAGGCGGCCTTTTCGGC‑G‑GCCCTGCAGgccgagc                                                                                                                          <  1:2186925/150‑1 (MQ=255)
                       cTCAAGCAGCATGTGCAGTCGCTGCGCAGCCACGTCAAAGGCCTGTCGAGCAAGGACTACAGCCGCCTCGAAGGCCTGCACAGCCTGGACTTCGTGTTGTTGTTCGTGCCCATCGAGGCGGCCTTTTCGGC‑G‑GCCCTGCAGgccgagccg                                                                                                                        >  2:633257/1‑150 (MQ=255)
                        tCAAGCAGCATGTGCAGTCGCTGCGCAGCCACGTCAAAGGCCTGTCGAGCAAGGACTACAGCCGCCTCGAAGGCCTGCACAGCCTGGACTTCGTGTTGTTGTTCGTGCCCATCGAGGCGGCCTTTTCGGC‑G‑GCCCTGCAGgccgagccga                                                                                                                       >  2:1039748/1‑150 (MQ=255)
                        tCAAGCAGCATGTGCAGTCGCTGCGCAGCCACGTCAAAGGCCTGTCGAGCAAGGACTACAGCCGCCTCGAAGGCCTGCACAGCCTGGACTTCGTGTTGTTGTTCGTGCCCATCGAGGCGGCCTTTTCGGC‑G‑GCCCTGCAGgccgagccga                                                                                                                       >  1:1014230/1‑150 (MQ=255)
                         cAAGCAGCATGTGCAGTCGCTGCGCAGCCACGTCAAAGGCCTGTCGAGCAAGGACTACAGCCGCCTCGAAGGCCTGCACAGCCTGGACTTCGTGTTGTTGTTCGTGCCCATCGAGGCGGCCTTTTCGGC‑G‑GCCCTGCAGGCCGAGCCGaa                                                                                                                      <  1:336476/150‑1 (MQ=255)
                          tttcgcgggcgttctgcccttgacgctcctgcttccacaggctgtcgataacccgcaaggtggccagcaacgtggtagggctgacaatcacgatctgccggtcgaaggcctcctggaacaggTTc                                                                                                                                                >  2:942363‑M1/123‑125 (MQ=255)
                          aaGCAGCATGTGCAGTCGCTGCGCAGCCACGTCAAAGGCCTGTCGAGCAAGGACTACAGCCGCTTCGAAGGCCTGCACAGCCTGGACTTCGTGTTGTTGTTCGTGCCCATCGAGGCGGCCTTTTCGGC‑G‑GCCCTGCAGGCCGAGCCGAAc                                                                                                                     <  2:1571657/150‑1 (MQ=255)
                            gcagcaTGTGCAGTCGCTGCGCAGCCACGTCAAAGGCCTGTCGAGCAAGGACTACAGCCGCCTCGAAGGCCTGCACAGCCTGGACTTCGTGTTGTTGTTCGTGCCCATCGAGGCGGCCTTTTCGGC‑G‑GCCCTGCAGGCCGAGCCGAACCt                                                                                                                   <  1:1056443/150‑1 (MQ=255)
                                 aTGTGCAGTCGCTGCGCAGCCACGTCAAAGGCCTGTCGAGCAAGGACTACAGCCGCCTCGAAGGCCTGCACAGCCTGGACTTCGTGTTGTTGTTCGTGCCCATCGAGGCGGCCTTTTCGGC‑G‑GCCCTGCAGGCCGAGCCGAACCTGTTcc                                                                                                              >  2:587197/1‑150 (MQ=255)
                                   gtgCAGTCGCTGCGCAGCCACGTCAAAGGCCTGTCGAGCAAGGACTACAGCCGCCTCGAAGGCCTGCACAGCCTGGACTTCGTGTTGTTGTTCGTGCCCATCGAGGCGGCCTTTTCGGC‑G‑GCCCTGCAGGCCGAGCCGAACCTGTTCCag                                                                                                            <  1:1744262/150‑1 (MQ=255)
                                       aGTCGCTGCGCAGCCACGTCAAAGGCCTGTCGAGCAAGGACTACAGCCGCCTCGAAGGCCTGCACAGCCTGGACTTCGTGTTGTTGTTCGTGCCCATCGAGGCGGCCTTTTCGGC‑G‑GCCCTGCAGGCCGAGCCGAACCTGTTCCaggagg                                                                                                        <  1:1039748/150‑1 (MQ=255)
                                        gTCGCTGCGCAGCCACGTCAAAGGCCTGTCGAGCAAGGACTACAGCCGCCTCGAAGGCCTGCACAGCCTGGACTTCGTGTTGTTGTTCGTGCCCATCGAGGCGGCCTTTTCGGC‑G‑GCCCTGCAGgc                                                                                                                               <  1:2074394/126‑1 (MQ=255)
                                        gTCGCTGCGCAGCCACGTCAAAGGCCTGTCGAGCAAGGACTACAGCCGCCTCGAAGGCCTGCACAGCCTGGACTTCGTGTTGTTGTTCGTGCCCATCGAGGCGGCCTTTTCGGC‑G‑GCCCTGCAGgc                                                                                                                               >  2:2074394/1‑126 (MQ=255)
                                        gTCGCTGCGCAGCCACGTCAAAGGCCTGTCGAGCAAGGACTACAGCCGCCTCGAAGGCCTGCACAGCCTGGACTTCGTGTTGTTGTTCGTGCCCATCGAGGCGGCCTTTTCGGC‑G‑GCCCTGCAGGCCGAGCCGAACCTGTTCCAGGAGGc                                                                                                       >  2:391613/1‑150 (MQ=255)
                                         tCGCTGCGCAGACACGTCAAAGGCCTGTCGAGCAAGGACTACAGCCGCCTCGAAGGCCTGCACAGCCTGGACTTCGTGTTGTTGTTCGTGCCCATCGAGGCGGCCTTTTCGGC‑G‑GCCCTGCAGGCCGAGCCGAACCTGTTCCAGGAGGcc                                                                                                      >  2:1154886/1‑150 (MQ=255)
                                           gCTGCGCAGCCACGTCAAAGGCCTGTCGAGCAAGGACTACAGCCGCCTCGAAGGCCTGCACAGCCTGGACTTCGTGTTGTTGTTCGTGCCCATCGAGGCGGCCTTTTCGGC‑G‑GCCCTGCAGGCCGAGCCGAACCTGTTCCAGGAGGCCtt                                                                                                    <  1:391613/150‑1 (MQ=255)
                                           gCTGCGCAGCCACGTCAAAGGCCTGTCGAGCAAGGACTACAGCCGCCTCGAAGGCCTGCACAGCCTGGACTTCGTGTTGTTGTTCGTGCCCATCGAGGCGGCCTTTTCGGC‑G‑GCCCTGCAGGCCGAGCCGAACCTGTTCCAGGAGGCCtt                                                                                                    <  2:1014230/150‑1 (MQ=255)
                                            cTGCTCAGCCACGTCAAAGGCCTGTCGAGCAAGGACTACAGCCGCCTCGAAGGCCTGCACAGCCTGGACTTCGTGTTGTTGTTCGTGCCCATCGAGGCGGCCTTTTCGGC‑G‑GCCCTGCAGGCCGAGCCGAACCTGTTCCAGGAGGCCTTc                                                                                                   <  2:1757729/150‑1 (MQ=255)
                                            cTGCGCAGCCACGTCAAAGGCCTGTCGAGCAAGGACTACAGCCGCCTCGAAGGCCTGCACAGCCTGGACTTCGTGTTGTTGTTCGTGCCCATCGAGGCGGCCTTTTCGGC‑G‑GCCCTGCAGGCCGAGCCGAACCTGTTCCAGGAGGCCTTc                                                                                                   >  2:2036805/1‑150 (MQ=255)
                                               cgcAGCCACGTCAAAGGCCTGTCGAGCAAGGACTACAGCCGCCTCGAAGGCCTGCACAGCCTGGACTTCGTGTTGTTGTTCGTGCCCATCGAGGCGGCCTTTTCGGC‑G‑GCCCTGCAGGCCGAGCCGAACCTGTTCCAGGAGGCCTTCGAc                                                                                                <  2:1761745/150‑1 (MQ=255)
                                                          cAAAGGCCTGTCGAGCAAGGACTACAGCCGCCTCGAAGGCCTGCACAGCCTGGACTTCGTGTTGTTGTTCGTGCCCATCGAGGCGGCCTTTTCGGC‑G‑GCCCTGCAGGCCGAGCCGAACCTGTTCCAGGAGGCCTTCGACCGGCAGATCGt                                                                                     <  2:1022024/150‑1 (MQ=255)
                                                           aaaGGCCTGTCGAGCAAGGACTACAGCCGCCTCGAAGGCCTGCACAGCCTGGACTTCGTGTTGTTGTTCGTGCCCATCGAGGCGGCCTTTTCGGC‑G‑GCCCTGCAGGCCGAGCCGAACCTGTTCCAGGAGGCCTTCGACCGGCAGATCGTg                                                                                    <  2:64652/150‑1 (MQ=255)
                                                              ggCCTGTCGAGCAAGGACTACAGCCGCCTCGAAGGCCTGCACAGCCTGGACTTCGTGTTGTTGTTCGTGCCCATCGAGGCGGCCTTTTCGGC‑G‑GCCCTGCAGGCCGCGCCGAACCTGTTCCAGGGGGCCTTCGACCGGCAGATCGTGGtt                                                                                 >  1:762786/1‑150 (MQ=255)
                                                              ggCCTGTCGAGCAAGGACTACAGCCGCCTCGAAGGCCTGCACAGCCTGGACTTCGTGTTGTTGTTCGTGCCCATCGAGGCGGCCTTTTCGGC‑G‑GCCCTGCAGGCCGAGCCGAACCTGTTCCAGGAGGCCTTCGACCGGCAGATCGTGAtt                                                                                 <  1:640372/150‑1 (MQ=255)
                                                                aggctgtcgataacccgcaaggtggccagcaacgtggtagggctgacaatcacgatctgccggtcgaaggcctcctggaacaggTTcgg                                                                                                                                              >  1:85612‑M1/85‑89 (MQ=255)
                                                                aggctgtcgataacccgcaaggtggccagcaacgtggtagggctgacaatcacgatctgccggtcgaaggcctcctggaacaggTTcgg                                                                                                                                              <  2:85612‑M1/5‑1 (MQ=255)
                                                                  tGTCGAGCAAGGACTACAGCCGCCTCGAAGGCCTGCACAGCCTGGACTTCGTGTTGTTGTTCGTGCCCATCGAGGCGGCCTTTTCGGC‑G‑GCCCTGCAGGCCGAGCCGAACCTGTTCCaggag                                                                                                         >  2:1388147/1‑122 (MQ=255)
                                                                  tGTCGAGCAAGGACTACAGCCGCCTCGAAGGCCTGCACAGCCTGGACTTCGTGTTGTTGTTCGTGCCCATCGAGGCGGCCTTTTCGGC‑G‑GCCCTGCAGGCCGAGCCGAACCTGTTCCaggag                                                                                                         <  1:1388147/122‑1 (MQ=255)
                                                                    tCGAGCAAGGACTACAGCCGCCTCGAAGGCCTGCACAGCCTGGACTTCGTGTTGTTGTTCGTGCCCATCGAGGCGGCCTTTTCGGC‑G‑GCCCTGCAGGCCGAGCCGAACCTGTTCCAGGAGGCCTTCGACCGGCAGATCGTGATTGTCAGc                                                                           >  1:760616/1‑150 (MQ=255)
                                                                            ggACTACAGCCGCCTCGAAGGCCTGCACAGCCTGGACTTCGTGTTGTTATTTGTGCCCATCGAGGCGGCCTTTTCGGC‑G‑GCCCTGCAGGCCGAGCCGAACCTGTTCCAGGAGGCCTTCGACCGGCAGATCGTGATTGTCAGCCCTACCAc                                                                   >  1:1918977/1‑150 (MQ=255)
                                                                              ccgcaaggtggccagcaacgtggtagggctgacaatcacgatctgccggtcgaaggcctcctggaacaggTTCGGC‑G‑GCCCCGCAGGCCGAGCCGAAc                                                                                                                     >  1:1699966‑M1/71‑98 (MQ=255)
                                                                              ccgcaaggtggccagcaacgtggtagggctgacaatcacgatctgccggtcgaaggcctcctggaacaggTTCGGC‑G‑GCCCCGCAGGCCGAGCCGAAc                                                                                                                     <  2:1699966‑M1/28‑1 (MQ=255)
                                                                               cgcaaggtggccagcaacgtggtagggctgacaatcacgatctgccggtcgaaggcctcctggaacaggTTCGGC‑G‑GCCCTGCAGGCCGAGCCGaa                                                                                                                      <  1:1449459‑M1/27‑1 (MQ=255)
                                                                               cgcaaggtggccagcaacgtggtagggctgacaatcacgatctgccggtcgaaggcctcctggaacaggTTCGGC‑G‑GCCCTGCAGGCCGAGCCGaa                                                                                                                      >  2:1449459‑M1/70‑96 (MQ=255)
                                                                                tACAGCCGCCTCGAAGGCCTGCACAGCCTGGACTTCGTGTTGTTGTTCGTGCCCATCGAGGCGGCCTTTTCGGC‑G‑GCCCTGCAGGCCGAGCCGAACCTGTTCCAGGAGGCCTTCGACCGGCAGATCGTGATTGTCAGCCCTACCACGTTg                                                               >  1:960661/1‑150 (MQ=255)
                                                                                tACAGCCGCCTCGAAGGCCTGCACAGCCTGGACTTCGTGTTGTTGTTCGGGCCCATCGAGGCGGCCTTTTCGGC‑A‑GCCCTGCAGGCCGAGCCGAACCTGTTGCAGGAGGCCTTCGACCGGCAGATCGTGATTGTCGGACCTACCACGTTg                                                               >  1:836314/1‑150 (MQ=255)
                                                                                  cAGCCGCCTCGAAGGCCTGCACAGCCTGGACTTCGTGTTGTTGTTCGTGCCCATCGAGGCGGCCTTTTCGGC‑G‑GCCCTGCAGGCCGAGCCGAACCTGTTCCAGGAGGCCTTCGACCGGCAGATCGTGATTGTCAGCACTACCACGTTGCt                                                             >  2:2076041/1‑150 (MQ=255)
                                                                                  cAGCCGCCTCGAAGGCCTGCACAGCCTGGACTTCGTGTTGTTGTTCGTGCCCATCGAGGCGGCCTTTTCGAC‑G‑GCCCTGCAGGCCGAGCCGAACCTGTTCCAGGAGGCCTTCGACCGGCAGATCGTGATTGTCAGCCCTACCACGTTGCt                                                             >  2:2305655/1‑150 (MQ=255)
                                                                                     ccgccTCGAAGGCCTGCACAGCCTGGACTTCGTGTTGTTGTTCGTGCCCATCGAGGCGGCCTTTTCGGC‑G‑GCCCTGCAGGCCGAGCCGAACCTGTTCCAGGAGGCCTTCGACCGGCAGATCGTGATTGTCAGCCCTACCACGTTGCTGGc                                                          >  1:1619525/1‑150 (MQ=255)
                                                                                       gccTCGAAGGCCTGCACAGCCTGGACTTCGTGTTGTTGTTCGTGCCCATCGAGGCGGCCTTTTCGGC‑G‑GCCCTGCAGGCCGAGCCGAACCTGTTCCAGGAGGCCTTCGACCGGCAGATCGTGATTGTCAGCCCTACCACGTTGCTGGCCa                                                        >  2:2185480/1‑150 (MQ=255)
                                                                                        ccTCGAAGGCCTGCACAGCCTGGACTTCGTGTTGTTGTTCGTGCCCATCGAGGCGGCCTTTTCGGC‑G‑GCCCTGCAGGCCGAGCCGAACCTGTTCCagga                                                                                                          <  1:961872/99‑1 (MQ=255)
                                                                                        ccTCGAAGGCCTGCACAGCCTGGACTTCGTGTTGTTGTTCGTGCCCATCGAGGCGGCCTTTTCGGC‑G‑GCCCTGCAGGCCGAGCCGAACCTGTTCCAGGAGGCCTTCGACCGGCAGATCGTGATTGTCAGCCCTACCACGTTGCTGGCCAc                                                       >  1:1654991/1‑150 (MQ=255)
                                                                                              aGGCCTGCACAGCCTGGACTTCGTGTTGTTGTTCGTGCCCATCGAGGCGGCCTTTTCGGC‑G‑GCCCTGCAGGCCGAGCCGAACCTGTTCCAGGAGGCCTTCGACCGGCAGATCGTGATTGTCAGCCCTACCACGTTGCTGGCCACCTTGCg                                                 <  2:2022459/150‑1 (MQ=255)
                                                                                               ggCCTGCACAGCCTGGACTTCGTGTTGTTGTTCGTGCCCATCGAGGCGGCCTTTTCGGC‑G‑GCCCTGCAGGCCGAGCCGAACCTGTTCCAGGAGGCCTTCGACCGGCAGATCGTGATTGTCAGCCCTACCACGTTGCTGGCCACCTTGCgg                                                <  1:587197/150‑1 (MQ=255)
                                                                                               ggCCTGCACAGCCTGGACTTCGTGTTGTTGTTCGTGCCCATCAAGGCGGCATTTTAGGC‑G‑TGTGTTAATCGCTATCCGAACCTGTTCCAGGAGGCCTTCGACCGGCAGATCGTGATTGTCAGCCCTACCACGTTGCTGGCCACCTTGCgg                                                <  1:633257/150‑1 (MQ=255)
                                                                                                gCCTGCACTGACGGCACTTTTTGTTTTTGGTCGTGCCCATCGAGGCGGCCTTTTCGGC‑G‑GCCCTGCAGGCCGAGCCGAACCTGTTCCAGGAGGCCTTCGACCGGCAGATCGTGATTGTCAGCCCTACCACGTTGCTGGCCACCTTGCggg                                               <  2:1299378/150‑1 (MQ=255)
                                                                                                gCCTGCACAGCCTGGACTTCGTGTTGTTGTTCGTGCCCATCGAGGCGGCCTTTTCGGC‑G‑GCCCTGCAGGCCGAGCCGAACCTGTTCCAGGAGGCCTTCGACCg                                                                                              <  1:295129/103‑1 (MQ=255)
                                                                                                 ccTGCACAGCCTGGACTTCGTGTTGTTGTTCGTGCCCATCGAGGCGGCCTTTTCGGC‑G‑GCCCTGCAGGCCGAGCCGAACCTGTTCCAGGAGGCCTTCGACCGGCAGATCGTGATTGTCAGCCCTACCACGTTGCTGGCCACCTTGCGGGt                                              >  2:1062499/1‑150 (MQ=255)
                                                                                                  cTGCACAGCCTGGACTTCGTGTTGTTGTTCGTGCCCATCGAGGCGGCCTTTTCGGC‑G‑GCCCTGCAGGCCGAGCCGAACCTGTTCCAGGAGGCCTTCGACCGGCAGATCGTGATTGTCAGCCCTACCACGTTGCTGGCCACCTTGc                                                  <  1:1322086/145‑1 (MQ=255)
                                                                                                  cTGCACAGCCTGGACTTCGTGTTGTTGTTCGTGCCCATCGAGGCGGCCTTTTCGGC‑G‑GCCCTGCAGGCCGAGCCGAACCTGTTCCAGGAGGCCTTCGACCGGCAGATCGTGATTGTCAGCCCTACCACGTTGCTGGCCACCTTGCGGGtt                                             >  1:1279429/1‑150 (MQ=255)
                                                                                                     cacaGCCTGGACTTCGTGTTGTTGTTCGTGCCCATCGAGGCGGCCTTTTCGGC‑G‑GCCCTGCAGGCCGAGCCGAACCTGTTCCAGGAGGCCTTCGACCGGCAGATCGTGATTGTCAGCCCTACCACGTTGCTGGCCACCTTGCGGGTTATc                                          <  2:1279429/150‑1 (MQ=255)
                                                                                                     cacaGCCTGGACTTCGTGTTGTTGTTCGTGCCCATCGAGGCGGCCTTTACCGC‑G‑GCGCTGTAGGCCACGCCGAATCGGTTCCAGGAGGCCTTCGACCGGCAGATCGTGATTGTCAGCCCTACCACGTTGCTGGCCACCTTGCGGGTTATc                                          <  2:553780/150‑1 (MQ=255)
                                                                                                          ccTGGACTTCGTGTTGTTGTTCGTGCCCATCGAGGCGGCCTTTTCGGC‑G‑GCCCTGCAGGCCGAGCCGAACCTGTTCCAGGAGGCCTTCGACCGGCAGATCGTGATTGTCAGCCCTACCACGTTGCTGGCCACCTTGCGGGTTATCGACAg                                     <  1:1154886/150‑1 (MQ=255)
                                                                                                          ccTGGACTTCGTGTTGTTGTTCGTGCCCATCGAGGCGGCCTTTTCGGC‑G‑GCCCTGCAGGCCGAGCCGAACCTGTTCCAGGAGGCCTTCGACCGGCAGATCGTGATTGTCAGCCCTACCACGTTGCTGGCCACCTTGCGGGTTATCGACAg                                     >  2:2324881/1‑150 (MQ=255)
                                                                                                          ccTGGACTTCGTGTTGTTGTTCGTGCCCATCGAGCCGGCCTTTTCGGC‑G‑GCCCTGCAGGCCGAGCCGAACCTGTTCCAGGAGGCCTTCGACCGGCAGATCGTGATTGTCAGCCCTACCACg                                                                  <  2:1236917/121‑1 (MQ=255)
                                                                                                           cTGGACTTCGTGTTGTTGTTCGTGCCCATCGAGGCGGCCTTTTCGGC‑G‑GCCCTGCAGGCCGAGCCGAACCTGTTCCAGGAGGCCtt                                                                                                    <  2:1926468/86‑1 (MQ=255)
                                                                                                           cTGGACTTCGTGTTGTTGTTCGTGCCCATCGAGGCGGCCTTTTCGGC‑G‑GCCCTACAGGCCGAGCCGAACCTGTTCCagga                                                                                                          <  1:908322/80‑1 (MQ=255)
                                                                                                           cTGGACTTCGTGTTGTTGTTCGTGCCCATCGAGGCGGCCTTTTCGGC‑G‑GCCCTACAGGCCGAGCCGAACCTGTTCCagga                                                                                                          >  2:908322/1‑80 (MQ=255)
                                                                                                            tGGACTTCGTGTTGTTGTTCGTGCCCATCGAGGCGGCCTTTTCGGC‑G‑GCCCTGCAGGCCGAGCCGAACCTGTTCCAGGAGGCCTTCGACCGGCAGATCGTGATTGTCAGCCCTACCACGTTGCTGGCCACCTTGCGGGTTATCGACAGcc                                   <  1:1224487/150‑1 (MQ=255)
                                                                                                               gcTTCGTGTTGTTGTTCGTGCCCATCGAGGCGGACTTTTCGGC‑G‑GCCCTGCAGGCCGAGCAGAACCTGTTCCAGGAGGCCTTCGACCGGCAGATCGTGATTGTCAGCCCTACCACGTTGCTGGCCACCTTGCGGGTTATCGACAGCCtgt                                <  2:1903990/149‑1 (MQ=255)
                                                                                                                cTTCGTGTTGTTGTTCGTGCCCATCGAGGCGGCCTTTTCGGC‑G‑GCCCTGCAGGCCGAGCCGAACCTGTTCCAGGAGGCCTTCGACCGGCAGATCGTGATTGTCAGCCCTACCACGTTGCTGGCCACCTTGCGGGTTATCGACAGCCtgtg                               >  1:547057/1‑150 (MQ=255)
                                                                                                                 ttCGTGTTGTTGTTCGTGCCCATCGAGGCGGCCTTTTCGGC‑G‑GCCCTGCAGGCCGAGCCGAACCTGTTCCAGGAGGCCTTCGACCGGCAGATCGTGATTGTCAGCCCTACCACGTTGCTGGCCACCTTGCGGGTTATCGACa                                      <  2:1156123/142‑1 (MQ=255)
                                                                                                                 ttCGTGTTGTTGTTCGTGCCCATCGAGGCGGCCTTTTCGGC‑G‑GCCCTGCAGGCCGAGCCGAACCTGTTCCAGGAGGCCTTCGACCGGCAGATCGTGATTGTCAGCCCTACCACGTTGCTGGCCACCTTGCGGGTTATCGACa                                      >  1:1156123/1‑142 (MQ=255)
                                                                                                                 ttCGTGTTGTTGTTCGTGCCCATCGAGACGGCCTTTTCGGC‑G‑GCCCTGCAGGCCGAGCCGAACCTGTTCCCGGAGGCCTTCGACCGGCAGATCGTGATTGTCAGCCCTACCACGTTGCTGGCCGCCTTGCGGGTTATCGACGGCGTGTgg                              >  2:866935/1‑150 (MQ=255)
                                                                                                                      gttgttgttCGTGCCCATCGAGGCGGCCTTTTCGGC‑G‑GCCCTGCAGGCCGAGCCGAACCTGTTCCAGGAGGCCTTCGACCGGCAGATCGTGATTGTCAGCCCTACCACGTTGCTGGCCACCTTGCGGGTTATCGACAGCCTGTGGAAGCa                         <  1:313594/150‑1 (MQ=255)
                                                                                                                      gttgttgttCGTGCCCATCGAGGCGGCCTTTTCGGC‑G‑GCCCTGCAGGCCGAGCCGAACCTGTTCCAGGAGGCCTTCGACCGGCAGATCGTGATTGTCAGCCCTACCACGTTGCTGGCCACCTTGCGGGTTATCGACAGCCTGTGGAAGCa                         >  1:1273005/1‑150 (MQ=255)
                                                                                                                          ttgttCGTGCCCATCGAGGCGGCCTTTTCGGC‑G‑GCCCTGCAGGCCGAGCCGAACCTGTTCCAGGAGGCCTTCGACCGGCAGATCGTGATTGTCAGCCCTACCACGTTGCTGGCCACCTTGCgg                                                <  2:2329203/123‑1 (MQ=255)
                                                                                                                          ttgttCGTGCCCATCGAGGCGGCCTTTTCGGC‑G‑GCCCTGCAGGCCGAGCCGAACCTGTTCCAGGAGGCCTTCGACCGGCAGATCGTGATTGTCAGCCCTACCACGTTGCTGGCCACCTTGCgg                                                >  1:2329203/1‑123 (MQ=255)
                                                                                                                           tgttCGTGCCCATCGAGGCGGCCTTTTCGGC‑G‑GCCCTGCAGGCCGAGCCGAACCTGTTCCAGGAGGCCTTCGACCGGCAGATCGTGATTGTCAGCCCTACCACGTTGCTGGGCACCTTGGGGGTTATCGACAGCCTGTGGAAGCAGGAGc                    >  1:770580/1‑150 (MQ=255)
                                                                                                                              tCGTGCCCATCGAGGCGGCCTTTTCGGC‑G‑GCCCTGCAg                                                                                                                                 >  2:633082/1‑38 (MQ=255)
                                                                                                                              tCGTGCCCATCGAGGCGGCCTTTTCGGC‑G‑GCCCTGCAg                                                                                                                                 <  1:633082/38‑1 (MQ=255)
                                                                                                                                gTGCCCATCGAGGCGGCCTTTTCGGC‑G‑GCCCTGCAGGCCGAGCCGAACCTGTTCCCGGAGGCCTTCGACCGGCAGATCGTGATTGTCAGCCCTACCACGtt                                                                <  2:72151/101‑1 (MQ=255)
                                                                                                                                gTGCCCATCGAGGCGGCCTTTTCGGC‑G‑GCCCTGCAGGCCGAGCCGAACCTGTTCCCGGAGGCCTTCGACCGGCAGATCGTGATTGTCAGCCCTACCACGtt                                                                >  1:72151/1‑101 (MQ=255)
                                                                                                                                gTGCCCATCGAGGCGGCCTTTTCGGC‑G‑GCCCTGCAGGCCGAGCCGAACCTGTTCCAGGAGGCCTTCGACCGGAAGCTCGTGATTGTCAGCCCGTCCTCGTTGCTGGCCACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCaa               <  1:2036805/150‑1 (MQ=255)
                                                                                                                                   cccATCGAGGCGGCCTTTTCGGC‑G‑GCCCTGCAGGCCGAGCCGAACCTGTTCCAGGAGGCCTTCGACCGGCAGATCGTGATTGTCAGCCCTACCACGTTGCTGGCCACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAggg            >  1:619383/1‑150 (MQ=255)
                                                                                                                                    ccATCGAGGCGGCCTTTTCGGC‑G‑GCCCTGCAGGCCGAGCCGAACCTGTTCCAGGAGGCCTTCGACCGGCAGATCGTg                                                                                    <  1:2195801/77‑1 (MQ=255)
                                                                                                                                    ccATCGAGGCGGCCTTTTCGGC‑G‑GCCCTGCAGGCCGAGCCGAACCTGTTCCAGGAGGCCTTCGACCGGCAGATCGTg                                                                                    >  2:2195801/1‑77 (MQ=255)
                                                                                                                                    ccATCGAGGCGGCCTTTTCGGC‑G‑GCCCTGCAGGCCGAGCCGAACCTGTTCCAGGAGGCCTTCGACCGGCAGATCGTGATTGTCAGCCCTACCACGTTGCTGGCCACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGc                    <  1:2131457/141‑1 (MQ=255)
                                                                                                                                    ccATCGAGGCGGCCTTTTCGGC‑G‑GCCCTGCAGGCCGAGCCGAACCTGTTCCAGGAGGCCTTCGACCGGCAGATCGTGATTGTCAGCCCTACCACGTTGCTGGCCACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGc           >  1:275927/1‑150 (MQ=255)
                                                                                                                                    ccATCGAGGCGGCCTTTTCGGA‑G‑GCCCTGCAGGCCGAGCCGAGGATGTCGTAGGATGCCTTCGACCGGCAGATCGGGATTGTCAGCCCTACCACGTTGCTGGCCACCTTGCGGGTTATCGACAGCTTGTGGAAGCTCGAGCGttcggcgc           >  2:327257/1‑143 (MQ=255)
                                                                                                                                     cATCGAGGCGGCCTTTTCGGC‑G‑GCCCTGCAGGCCGAGCCGAACCTGTTCCAGGAGGCCTTCGACCGGCAGATCGTGATTGTCAGCCCTACCACGTTGCTGGCCACCTTGCGGGTTATCGAc                                       >  2:410277/1‑121 (MQ=255)
                                                                                                                                      cctcctggaacaggTTCGGC‑TCGGCCTGCAGGGCC‑GCCGAACCTGTTCCAGGAGGCCTTCGACCGGCAGATCGTGATTGTCAGCCCTACCACGTTGCTGGCCACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAg         <  1:973203‑M1/136‑1 (MQ=255)
                                                                                                                                       tCGAGGCGGCCTTTTCGGC‑G‑GCCCTGCAGGCCGAGCCGAACCTGTTCCAGGAGGCCTTCGACCGGCAGATCGTGATTGTCAGCCCTACCACGTTGCTGGCCACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGa        >  2:467641/1‑150 (MQ=255)
                                                                                                                                            gcggcCTTTTCGGC‑G‑GCCCTGCAGGCCGAGCCGAACCTGTTCCAGGAGGCCTTCGACCGGCAGATCGTGATTGTCAGCCCTACCACGTTGCTGGCCACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGcc   >  2:72027/1‑150 (MQ=255)
                                                                                                                                             gaacaggTTCGGCTC‑GGCCTGCAGGGCC‑GCCGAACCTGTTCCAGGAGGCCTTCGACCGGCAGATTGTGATTGTCAGCCCTACCACGTTGCTGGCCACCTTGCGGGTTATCGACAGCCtgt                                >  2:324956‑M1/8‑120 (MQ=255)
                                                                                                                                             gaacaggTTCGGC‑TCGGCCTGCAGGGCC‑GCCGAACCTGTTCCAGGAGGCCTTCGACCGGCAGATCGTGATTGTCAGCCCTACCACGTTGCTGGCCACCTTGCGGGTTATCGACAGCCtgt                                <  1:324956‑M1/113‑1 (MQ=255)
                                                                                                                                             cggcCTTTTCGGC‑G‑GCCCTGCAGGCCGAGCCGAACCTGTTCCAGGAGGCCTTCGACCGGCAGATCGTGATTGTCAGCCCTACCACGTTGCTGGCCACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGccc  <  2:619383/150‑1 (MQ=255)
                                                                                                                                                 cTTTTCGGC‑G‑GCCCTGCAGGCCGAGCCGAACCTGTTCCAGGAGGCCTTCGACCGGCAGATCGTGATTGTCAGCCCTACCACGTTGCTGGCCACCTTGCGGGTTATCGACAGCCt                                  <  1:2058131/114‑1 (MQ=255)
                                                                                                                                                 cTTTTCGGC‑G‑GCCCTGCAGGCCGAGCCGAACCTGTTCCAGGAGGCCTTCGACCGGCAGATCGTGATTGTCAGCCCTACCACGTTGCTGGCCACCTTGCGGGTTATCGACAGCCt                                  >  2:2058131/1‑114 (MQ=255)
                                                                                                                                                    |                                                                                                                                                
TTGCCGGCAACGACGAAGTTGCGCTCAAGCAGCATGTGCAGTCGCTGCGCAGCCACGTCAAAGGCCTGTCGAGCAAGGACTACAGCCGCCTCGAAGGCCTGCACAGCCTGGACTTCGTGTTGTTGTTCGTGCCCATCGAGGCGGCCTTTTCGGC‑G‑GCCCTGCAGGCCGAGCCGAACCTGTTCCAGGAGGCCTTCGACCGGCAGATCGTGATTGTCAGCCCTACCACGTTGCTGGCCACCTTGCGGGTTATCGACAGCCTGTGGAAGCAGGAGCGTCAAGGGCAGAACGCCC  >  NC_002947/1886289‑1886579

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.