BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2236977	96 (1.090)	7 (0.080) +AT	6/244	NT	7.6%	intergenic (+29/+99)	uvrB/PP_1975	uvrABC excinuclease protein B/EmrB/QacA family drug resistance transporter
*	?	NC_002947	= 2301608	78 (0.880)	7 (0.080) +AT	6/244	NT	7.6%	intergenic (‑209/‑122)	sbcD/PP_5497	exonuclease subunit SbcD/rhs repeat‑associated core domain‑containing protein

Only 100 of 115 total aligned reads displayed.

CAAGCGCATCAAGCAGTTGGAAGAGAAAATGATGCAGTTCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCAACTTGCGGGTCAGCAG  >  NC_002947/2236828‑2237126

cAAGCGCATCAAGCAGTTGGAAGAGAAAATGATGCAGTTCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGc                                                                                                                                                       <  2:1555289/150‑1 (MQ=255)

  aGCGCATCAAGCAGTTGGAAGAGAAAATGATGCAGTTCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGt                                                                                                                                                     <  2:830892/150‑1 (MQ=255)

     gcATCAAGCAGTTGGAAGAGAAAATGATGCAGTTCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGcc                                                                                                                                                  >  1:382266/1‑150 (MQ=255)

           aGCAGTTGGAAGAGAAAATGATGCAGTTCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCacgcccgctcc                                                                                                                                            <  2:505830‑M1/150‑12 (MQ=255)

             cAGTTGGAAGAGAAAATGATGCAGTTCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCgaaga                                                                                                                                          <  1:1647727/150‑1 (MQ=255)

              aGTTGGAAGAGAAAATGATGCAGTTCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCgaagaa                                                                                                                                         <  1:1135478/150‑1 (MQ=255)

                ttGGAAGAGAAAATGATGCAGTTCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGcc                                                                                                                                                  <  2:2087750/139‑1 (MQ=255)

                ttGGAAGAGAAAATGATGCAGTTCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGcc                                                                                                                                                  >  1:2087750/1‑139 (MQ=255)

                    aaGAGAAAATGATGCAGTTCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGTAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAAc                                                                                                                                   >  1:413726/1‑150 (MQ=255)

                    aaGAGAAAATGATGCAGTTCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAAc                                                                                                                                   >  1:1447846/1‑150 (MQ=255)

                           aaTGATGCAGTTCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGTCCCTGTGGGAGCGGGCatgcccgcgaacaccggcgcagccggt                                                                                                                            >  2:54918‑M1/1‑123 (MQ=255)

                           aaTGATGCAGTTCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGtgg                                                                                                                            >  2:1394769/1‑150 (MQ=255)

                            atgatgCAGTTCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGtggc                                                                                                                           >  1:2079224/1‑150 (MQ=255)

                              gatgCAGTTCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGtggctg                                                                                                                         <  2:691078/150‑1 (MQ=255)

                              gatgCAGTTCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGtggctg                                                                                                                         >  1:299117/1‑150 (MQ=255)

                              gatgCAGTTCGCCCGCGACCTGGAGTCCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGtggctg                                                                                                                         <  1:1819950/150‑1 (MQ=255)

                                tgCAGTTCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGtggctggc                                                                                                                       >  2:174737/1‑150 (MQ=255)

                                 gCAGTTCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGCGATTGCGCAGCTGCGGGAGCGGTTGTCGTACACCGCAAGCCGGGCGCGGGCCCTGTGGGAGAGGGCGCCCCGGCTGAGAATTCAACGCGAtggctggtt                                                                                                                      >  1:1571453/1‑148 (MQ=255)

                                 gCAGTTCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCa                                                                                                                      <  2:819944/150‑1 (MQ=255)

                                   aGTTCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCAcc                                                                                                                    >  2:2232235/1‑150 (MQ=255)

                                    gTTCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCg                                                                                                                   >  1:86052/1‑150 (MQ=255)

                                     ttCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCgaa                                                                                                                                            <  1:993807/124‑1 (MQ=255)

                                         cccGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTgc                                                                                                              >  2:1142838/1‑150 (MQ=255)

                                           cgcgACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCaa                                                                                                                                    <  2:862253/126‑1 (MQ=255)

                                               aCCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCCCCGGGGTGGCTGGCACCGGCTGCGCCGgt                                                                                                        <  1:1815673/150‑1 (MQ=255)

                                               aCCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGgt                                                                                                        <  2:870576/150‑1 (MQ=255)

                                               aCCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGgt                                                                                                        <  1:1962245/150‑1 (MQ=255)

                                                ccTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCGCTGTGGGAGCGGGTGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCGGgtg                                                                                                       >  1:253390/1‑150 (MQ=255)

                                                   ggAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTc                                                                                                    >  1:840386/1‑150 (MQ=255)

                                                   ggAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTc                                                                                                    <  2:1338587/150‑1 (MQ=255)

                                                   ggAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTc                                                                                                    <  2:86052/150‑1 (MQ=255)

                                                       ttCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCCGCTGCGGGCGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCgg                                                                                                <  2:1133593/150‑1 (MQ=255)

                                                       ttCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGTCCCTGTGGGAGCGGGcgccgcgcgaacaccggcgcagccggtgccagccaccgcgttgaattcttcgcgg                                                                                                 <  1:166328‑M1/150‑56 (MQ=255)

                                                       ttCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCTGTGTTcgctg                                                                                                <  2:513659/150‑3 (MQ=255)

                                                       ttCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCgg                                                                                                >  1:321760/1‑150 (MQ=255)

                                                       ttCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCgg                                                                                                <  1:271561/150‑1 (MQ=255)

                                                       ttCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCgg                                                                                                <  2:321760/150‑1 (MQ=255)

                                                         cGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCatgcccgcgaacaccggcgcagccggtgccagccaccgcgttgaattcttcgcgggc                                                                                              >  2:1927607‑M1/1‑93 (MQ=255)

                                                          gAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGAGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCa                                                                                             >  2:1714970/1‑150 (MQ=255)

                                                          gAAGCTGCAGCGCAGGTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCa                                                                                             >  2:681246/1‑150 (MQ=255)

                                                             gcggcggcgcagTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGGCCTGTGGGAGCGGGCatgcccgcgaacaccggcgcagccggtgccagccaccgcgttgaattcttcgcgggcacgc                                                                                          <  2:2244088‑M1/147‑62 (MQ=255)

                                                               tGCGGCGCAGTTGCGTGACGCGATTGCGCAGCTGCGGGCGCGGTTGATCCGCCGCTGAAGCCGGGCGCGGGCCCTGTCGCAGCGGGCGTGCCCGCGACGAATTCAACGCGGTGGCCGGCACCGGCTGCGCGGGTGTTCGCGGGCCTGccc                                                                                        >  1:2266803/1‑150 (MQ=255)

                                                               tGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGGAGAATGCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGccc                                                                                        >  2:1231119/1‑150 (MQ=255)

                                                                    cgcAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCatgcccgcgaacaccggcgcagccggtgccagccaccgcgttgaattcttcgcgggcacgcccgctcc                                                                                   <  1:1927607‑M1/150‑69 (MQ=255)

                                                                      cAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGTCCCTGTGGGAGCGGGCatgcccgcgaacaccggcgcagccggtgccagccaccgcgttgaattcttcgcgggcacgcccgctccca                                                                                 <  1:54918‑M1/150‑71 (MQ=255)

                                                                       aGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCcac                                                                                >  1:1318551/1‑150 (MQ=255)

                                                                        gTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCcaca                                                                               >  2:1378457/1‑150 (MQ=255)

                                                                         ttGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCaa                                                                                                                                    <  2:944000/96‑1 (MQ=255)

                                                                         ttGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCaa                                                                                                                                    >  1:944000/1‑96 (MQ=255)

                                                                         ttGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAg                                                                              <  2:2079224/150‑1 (MQ=255)

                                                                           gCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAggg                                                                            >  2:508297/1‑150 (MQ=255)

                                                                             gTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGAc                                                                          <  1:1391291/150‑1 (MQ=255)

                                                                              tGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGAcc                                                                         >  2:301398/1‑150 (MQ=255)

                                                                               gACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCgaagaa                                                                                                                                         >  1:409416/1‑85 (MQ=255)

                                                                                      ttGCGCAGCTGCGGGAGCGGTTGATAAGCCGATGTCGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCatctga                                                                 <  2:382266/150‑1 (MQ=25)

                                                                                       tGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGTGAGCGTGCCCGCGAAGTATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCatctgat                                                                <  1:1449654/150‑1 (MQ=255)

                                                                                       tGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCCGGTCCGCTCCCACAGGGACCGCatctgat                                                                <  1:1231119/150‑1 (MQ=255)

                                                                                        gcgcAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCatctgatc                                                               <  2:1986073/150‑1 (MQ=255)

                                                                                         cgcAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCatctgatct                                                              <  1:681246/150‑1 (MQ=255)

                                                                                          gcAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACCCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCatctgatctg                                                             <  2:790176/150‑1 (MQ=255)

                                                                                          gcAGCCGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCatctgatctg                                                             >  2:1204461/1‑150 (MQ=255)

                                                                                            aGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTa                                                           <  1:556763/150‑1 (MQ=255)

                                                                                             gCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTaa                                                          <  1:2232235/150‑1 (MQ=255)

                                                                                              cTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCAt                                                                                            >  2:1384826/1‑115 (MQ=255)

                                                                                              cTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCAt                                                                                            <  1:1384826/115‑1 (MQ=255)

                                                                                              cTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAAt                                                         <  1:1378457/150‑1 (MQ=255)

                                                                                               tGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCAGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATa                                                        <  2:1739202/150‑1 (MQ=255)

                                                                                                 cGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGc                                                      <  2:1447846/150‑1 (MQ=255)

                                                                                                 cGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGc                                                      >  1:2066944/1‑150 (MQ=255)

                                                                                                    gAGCGTTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGcc                                                                                                                                                  >  1:2091490/1‑55 (MQ=255)

                                                                                                    gAGCGTTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGcc                                                                                                                                                  <  2:2091490/55‑1 (MQ=255)

                                                                                                        ggTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATg                                               >  2:1109699/1‑150 (MQ=255)

                                                                                                          ttGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATggg                                             <  1:301398/150‑1 (MQ=255)

                                                                                                              tCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTcgcg                                                                                                 <  2:338429/94‑1 (MQ=255)

                                                                                                              tCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTcgcg                                                                                                 >  1:338429/1‑94 (MQ=255)

                                                                                                                 gcagcTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAAtt                                                                                                                                       <  1:1787891/53‑1 (MQ=255)

                                                                                                                 gcagcTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAAtt                                                                                                                                       >  2:1787891/1‑53 (MQ=255)

                                                                                                                 gcagcTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTcccc                                      >  2:559924/1‑150 (MQ=255)

                                                                                                                 gcagcTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTcccc                                      >  2:9132/1‑150 (MQ=255)

                                                                                                                    gcTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGc                                   <  2:2066944/150‑1 (MQ=255)

                                                                                                                         aGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGc                                                      <  2:341618/126‑1 (MQ=255)

                                                                                                                          gCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCaa                             <  2:299117/150‑1 (MQ=255)

                                                                                                                           ccGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAAc                            <  1:174737/150‑1 (MQ=255)

                                                                                                                             gggCGCGGGCCCTGTGGGAGCGGGCGTNCCCGCGAAGAATNCAACGCNGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAAccc                          >  1:1567412/1‑150 (MQ=255)

                                                                                                                             gggCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAAccc                          >  2:599299/1‑150 (MQ=255)

                                                                                                                                  cttgCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCg                     <  1:817841/147‑1 (MQ=255)

                                                                                                                                     gCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCa                  >  1:585540/1‑150 (MQ=255)

                                                                                                                                      cccTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCaa                 >  1:619948/1‑150 (MQ=255)

                                                                                                                                       tcTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCCTGCCGGCTCCCACCGGGACCGCATCTGATCTGTACTACCCTCAATCGGCTTCCCCAGCCTTCAACCCTTCCGGCacc                >  2:583905/2‑148 (MQ=25)

                                                                                                                                        cTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCg                     >  1:162255/1‑144 (MQ=255)

                                                                                                                                        cTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCg                     <  2:162255/144‑1 (MQ=255)

                                                                                                                                        cTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCAACt               >  2:755069/1‑150 (MQ=255)

                                                                                                                                        cTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCAACt               >  2:855206/1‑150 (MQ=255)

                                                                                                                                            gggAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCAACTTGCg           <  1:855206/150‑1 (MQ=255)

                                                                                                                                             ggAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCAACTTGCgg          <  1:1142838/150‑1 (MQ=255)

                                                                                                                                                gCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCAACTTGCGGGTc       >  1:312781/1‑150 (MQ=255)

                                                                                                                                                    gCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGAcc                                                                         <  1:71672/80‑1 (MQ=255)

                                                                                                                                                    gCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGAcc                                                                         >  2:71672/1‑80 (MQ=255)

                                                                                                                                                     cGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCAACTTGCGGGTcagc    >  2:2094713/1‑148 (MQ=255)

                                                                                                                                                     cGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCAACTTGCGGGTcagc    <  1:2094713/148‑1 (MQ=255)

CAAGCGCATCAAGCAGTTGGAAGAGAAAATGATGCAGTTCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCAACTTGCGGGTCAGCAG  >  NC_002947/2236828‑2237126

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.