New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 223697796 (1.090)7 (0.080)
+AT		 6/244 NT 7.6% intergenic (+29/+99) uvrB/PP_1975 uvrABC excinuclease protein B/EmrB/QacA family drug resistance transporter
?NC_002947 = 2301608 78 (0.880)intergenic (‑209/‑122) sbcD/PP_5497 exonuclease subunit SbcD/rhs repeat‑associated core domain‑containing protein

Only 100 of 101 total aligned reads displayed.

GGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCG‑GGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTATGAGGCTAGGCGATGGCGACCTTGGCACAGGTCTAT  >  NC_002947/2301461‑2301753
                                                                                                                                                    |                                                                                                                                                 
ggggCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCG‑GGCGc                                                                                                                                                 >  2:1339002‑M2/1‑149 (MQ=255)
     cGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCCCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCCGTGCATGGCACCTGCTGCCCCGGCGTTCGCG‑CCCCCGcccc                                                                                                                                            >  2:759638/1‑149 (MQ=37)
      gCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCG‑GGCGcgcccgc                                                                                                                                           >  2:2220673‑M2/1‑143 (MQ=255)
           gCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCG‑GGCGcgcccgctccca                                                                                                                                      >  2:840076‑M2/1‑138 (MQ=255)
              gCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCG‑GGCGCGCCCGCTCCCACAt                                                                                                                                   >  1:162749/1‑150 (MQ=255)
               cccGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCG‑GGCGCGCCCGCTCCCACATg                                                                                                                                  <  2:883580/150‑1 (MQ=255)
               cccGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCG‑GGCGCGCCCGCTCCCACATg                                                                                                                                  >  2:1023377/1‑150 (MQ=255)
                              gCCAGCTCTCACAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCG‑GGCGCGCCCGCTCCCACATGGACCACGCTTGCCTg                                                                                                                   >  2:10953/1‑150 (MQ=255)
                               ccAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCG‑GGCGCGCCCGCTCCCACATg                                                                                                                                  <  1:54028/134‑1 (MQ=255)
                               ccAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCG‑GGCGCGCCCGCTCCCACATg                                                                                                                                  >  2:54028/1‑134 (MQ=255)
                                      tcATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCG‑GGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCAttttt                                                                                                           <  1:2056455/150‑1 (MQ=255)
                                      tcATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCG‑GGCGCGCCCGCTCCCACATGGACCACGCCTGCCTGGCAttttt                                                                                                           <  1:1683086/150‑1 (MQ=255)
                                        aTAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCG‑GGCGCGCCCGCTCCCACATGGACCACGCtt                                                                                                                        >  2:1998476/1‑135 (MQ=255)
                                        aTAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCG‑GGCGCGCCCGCTCCCACATGGACCACGCtt                                                                                                                        <  1:1998476/135‑1 (MQ=255)
                                        aTAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCG‑GGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGt                                                                                                         >  1:92158/1‑150 (MQ=255)
                                          aGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCG‑GGCGCGCCCGCTCCCACATGTACCACGCTTGCCTGGCATTTTTGTCa                                                                                                       <  1:1606113/150‑1 (MQ=255)
                                          aGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCG‑GGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCa                                                                                                       <  1:1128363/150‑1 (MQ=255)
                                            aaCTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCG‑GGCGcgccc                                                                                                                                             <  2:644743‑M2/110‑6 (MQ=255)
                                            aaCTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCG‑GGCGcgccc                                                                                                                                             >  1:644743‑M2/1‑105 (MQ=255)
                                            aaCTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCG‑GGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGt                                                                                                     >  2:2054022/1‑150 (MQ=255)
                                               tGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCG‑GGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGtt                                                                                                    <  1:626745/148‑1 (MQ=255)
                                               tGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCG‑GGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGtt                                                                                                    >  2:626745/1‑148 (MQ=255)
                                                  gcATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCG‑GGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGtctc                                                                                               >  1:1123925/1‑150 (MQ=255)
                                                    aTCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCG‑GGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCATTTGTCTCGc                                                                                             >  2:2062678/1‑150 (MQ=255)
                                                        cTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCG‑GGCGcgcc                                                                                                                                              >  2:152856‑M2/1‑93 (MQ=255)
                                                        cTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCG‑GGCGcgcc                                                                                                                                              <  1:152856‑M2/97‑5 (MQ=255)
                                                        cTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCG‑GGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGtt                                                                                         <  1:1100147/150‑1 (MQ=255)
                                                         ttACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCG‑GGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTg                                                                                        >  1:1882164/1‑150 (MQ=255)
                                                         ttACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCG‑GGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTg                                                                                        >  1:314794/1‑150 (MQ=255)
                                                               aTTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCG‑GGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTgcg                                                                                  >  1:1373630/1‑150 (MQ=255)
                                                               aTTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCG‑GGCGCGCCCGCTCCCACAAGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTgcg                                                                                  >  1:733297/1‑150 (MQ=255)
                                                               aTTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGCTCGCG‑GGCGCGCCCGCTCCCACATGGACCACGCTTGCCCGGCATCTTCGTCAGTCGTCTCGCCGTCGaccgcg                                                                                  >  2:1288986/1‑145 (MQ=21)
                                                                tttAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCG‑GGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTgcgg                                                                                 <  1:1169665/150‑1 (MQ=255)
                                                                 ttAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCG‑GGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGGTTgcggc                                                                                >  1:100252/1‑150 (MQ=255)
                                                                 ttAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCG‑GGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTgcggc                                                                                <  2:1882164/150‑1 (MQ=255)
                                                                   aGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCG‑GGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGcggcgg                                                                              >  2:542808/1‑150 (MQ=255)
                                                                      aGGGACCCTGTGGGAGCGGTCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCG‑GGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGaaa                                                                           >  1:1355563/1‑150 (MQ=255)
                                                                       gggACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCG‑GGCGcgcccgctc                                                                                                                                         >  2:196147‑M2/1‑78 (MQ=255)
                                                                       gggACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCG‑GGCGcgcccgctc                                                                                                                                         <  1:196147‑M2/87‑10 (MQ=255)
                                                                       gggACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTAGCG‑GTCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGaaaa                                                                          >  1:2036228/1‑150 (MQ=255)
                                                                        ggACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCG‑GGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGt                                                                                                     >  1:978044/1‑122 (MQ=255)
                                                                            ccTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCG‑GGCGcgcccgctcccacagggtccctgctaaatcagtaagtgatgcgcagttctatgagagctggcttgcccgcgatcggg                                                                     <  1:1538254‑M2/150‑78 (MQ=255)
                                                                            ccTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCG‑GGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATtgt                                                                     >  2:1099852/1‑150 (MQ=255)
                                                                            ccTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCG‑GGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATtgt                                                                     <  2:92158/150‑1 (MQ=255)
                                                                            ccTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGGGTTCGCG‑GGCGAGGCCGCTCCCACATGGCCCACGCTAACCAAGACTGTTTAGCTGGTTTCTCGCCGTTGATTGCGGCGGAAAAATtgt                                                                     >  1:1685692/1‑150 (MQ=18)
                                                                             cTGTGGGAGCGGCCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGGTCGCG‑GGCGCGCCCGCTCCCACATGGACCACGCTTCCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATtgtg                                                                    >  2:459803/1‑150 (MQ=255)
                                                                               gtgGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCG‑AGAGAGACTGCGCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGtt                                                                  <  1:2035256/150‑1 (MQ=37)
                                                                                tgGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCG‑GGCatgcccgctcccacagggaccgcgcccggcttcagctgctgatcaaccgctcccgcagctgcgcaatctcgtcacgcaactg                                                                 <  1:54918‑M2/150‑83 (MQ=255)
                                                                                  ggAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCG‑GGCatgcccgctcccacagggcccgcgcccggcttcagctgctgatcaaccgctcccgcagctgcgcaatctcgtcacgcaactgcg                                                               <  1:1927607‑M2/150‑85 (MQ=255)
                                                                                  ggAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCG‑GGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGa                                                               <  2:162749/150‑1 (MQ=255)
                                                                                   gAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCG‑GGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGCTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAg                                                              >  2:105588/1‑150 (MQ=255)
                                                                                         gCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCG‑GGCatgcccgctcccacaggccccgcgcccggcttcagctgctgatcaaccgctcccgcagctgcgcaatctcgtcacgcaactgcgccgccgc                                                        <  2:2244088‑M2/150‑92 (MQ=255)
                                                                                         gCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCG‑GGCGcgcccgctcccacagggtccctgctaaatcagtaagtgatgcgcagttctatgagagctagcttgcccgcgatcg                                                                       >  1:1619996‑M2/1‑60 (MQ=255)
                                                                                         gCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCG‑GGCGcgcccgctcccacagggtccctgctaaatcagtaagtgatgcgcagttctatgagagctagcttgcccgcgatcg                                                                       <  2:1619996‑M2/135‑76 (MQ=255)
                                                                                          cGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCG‑GGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCAAAAAAATTGTGTTCGAGCAAACTa                                                       <  2:927769/150‑1 (MQ=255)
                                                                                           gTGCCCGCGAAGAATCCAACGGGGTCTATGGCACCGGCTGCGCCGGTGTTCGCG‑GGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTAc                                                      <  2:1123925/150‑1 (MQ=255)
                                                                                             gCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCG‑GGCatgcccgctcccacagggcccgcgcccggcttcagctgctgatcaaccgctcccgcagctgcgcaatctcgtcacgcaactgcgccgcagcttcg                                                    >  2:1927607‑M2/1‑55 (MQ=255)
                                                                                               ccGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGCGGCgtcccgctcccacagggaccgcgcccggcttcagctgctgatcaaccgctcccgcagctgcgcaatctcgtcacgcaactgcgccgcagcttcgaa                                                   <  1:166328‑M2/150‑97 (MQ=255)
                                                                                                 gcgAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCG‑GGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTgg                                                >  2:2315002/1‑150 (MQ=255)
                                                                                                      gaaTCGAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTGGCG‑GGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCAc                                           <  1:1288986/150‑1 (MQ=255)
                                                                                                      gaaTCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCG‑GGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCAc                                           >  2:1405687/1‑150 (MQ=255)
                                                                                                        aTCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCG‑GGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACtt                                         <  1:1561156/150‑1 (MQ=255)
                                                                                                         tCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCG‑GGCGCGCCCGCTCCCACATGTACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGcc                                                                                            <  1:1213575/98‑1 (MQ=255)
                                                                                                         tCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCG‑GGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGcc                                                                                            >  2:1213575/1‑98 (MQ=255)
                                                                                                         tCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCG‑GGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTg                                        <  1:2013264/150‑1 (MQ=255)
                                                                                                          ccAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCG‑GGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGt                                       <  2:314794/150‑1 (MQ=255)
                                                                                                            accgcgGTGCATGGCACCGGCTGCGCCGGTGTTCGCG‑GGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTAt                                     >  2:1097128/3‑150 (MQ=255)
                                                                                                            aaCGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCG‑GGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGt                                                                                          >  1:2208052/1‑97 (MQ=255)
                                                                                                            aaCGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCG‑GGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGt                                                                                          <  2:2208052/97‑1 (MQ=255)
                                                                                                            aaCGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCG‑GGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATtg                                                                      <  2:2230214/117‑1 (MQ=255)
                                                                                                            aaCGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCG‑GGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATtg                                                                      >  1:2230214/1‑117 (MQ=255)
                                                                                                            aaCGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCG‑GGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCCCTTGTAt                                     >  1:496571/1‑150 (MQ=255)
                                                                                                            aaCGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCG‑GGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTAt                                     >  2:1681460/1‑150 (MQ=255)
                                                                                                               gcgGTGCATGGCACCGGCTGCGCCGGTGTTCGCG‑GGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTATGAg                                  >  1:2214554/1‑150 (MQ=255)
                                                                                                                cgGTGCATGGCACCGGCTGCGCCGGTGTTCGCG‑GGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTATGAgg                                 <  2:1355563/150‑1 (MQ=255)
                                                                                                                   tGCATGGCACCGGCTGCGCCGGTGTTCGCG‑GGCGCGCCCGCTCCCACATGGACCACGCTTGc                                                                                                                      <  1:523913/62‑1 (MQ=255)
                                                                                                                   tGCATGGCACCGGCTGCGCCGGTGTTCGCG‑GGCGCGCCCGCTCCCACATGGACCACGCTTGc                                                                                                                      >  2:523913/1‑62 (MQ=255)
                                                                                                                          cACCGGCTGCGCCGGTGTTCGCG‑GGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTATGAGGCTAGGCGATg                       <  1:1097128/150‑1 (MQ=255)
                                                                                                                           aCCGGCTGCGCCGGTGTTCGCG‑GGCatgcccgctcccacagggaccgcgcccggcttcagctgctgatcaaccgctcccgcagctgcgcaatctcgtcacgcaactgcgccgcagcttcgaactccaggtcgcgggcgaactgcatcatt                      >  2:54918‑M2/1‑25 (MQ=255)
                                                                                                                           aCCGGCTGCGCCGGTGTTCGCG‑GGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTATGAGGCTAGGCGATgg                      >  1:1245149/1‑150 (MQ=255)
                                                                                                                                  gcgcCGGTGTTCGCG‑GGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTATGAGGCTAGGCGATGGCGACCtt               <  2:2214554/150‑1 (MQ=255)
                                                                                                                                    gcCGGTGTTCGCG‑GGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTATGAGGCTAGGCGATGGCGACCTTgg             <  1:2145228/150‑1 (MQ=255)
                                                                                                                                    gcCGGTGTTCGCG‑GGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTATGAGGCTAGGCGATGGCGACCTTgg             <  1:1099852/150‑1 (MQ=255)
                                                                                                                                      cGGTGTTCGCG‑GGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTATGAGGCTAGGCGAt                        >  1:664049/1‑137 (MQ=255)
                                                                                                                                      cGGTGTTCGCG‑GGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTATGAGGCTAGGCGAt                        <  2:664049/137‑1 (MQ=255)
                                                                                                                                        gtgtTCGCG‑GGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTATGAGGCTAGGCGATGGCGACCTTGGcaca         <  1:10953/150‑1 (MQ=255)
                                                                                                                                         tgtTCGCG‑GGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGtt                                                                                                    <  1:1561094/58‑1 (MQ=255)
                                                                                                                                         tgtTCGCG‑GGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGtt                                                                                                    >  2:1561094/1‑58 (MQ=255)
                                                                                                                                         cgagagcg‑ggcctgccagctaccacagggtccctgctaaatcagtaagtgatgcgcagttctatgagagctggcttgcccgcgatcgggccgcacagcggccccacgcttgggttaccataccgccctttccccgcttgcccgactcgac        <  2:384199‑M2/145‑139 (MQ=255)
                                                                                                                                           ttCGCG‑GGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTATGAGGCTAGGCGATGGCGACCTTGGCACAGGt      >  1:1998880/1‑150 (MQ=255)
                                                                                                                                           ttCGCG‑GGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTATGAGGCTAGGCGATGGCGACCTTGGCACAGGt      <  2:1373630/150‑1 (MQ=255)
                                                                                                                                           ttCGCG‑GGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCACGCCAACCGGAACTTGCTCACATGTATGAGGCTAGGCGATGGCGACCTTGGCACAGGt      >  2:652253/1‑150 (MQ=255)
                                                                                                                                           ggagcg‑ggcgtgcccgctcccacagggcccgcgcccggcttcagctgctgatcaaccgctcccgcagctgcgcaatctcgtcacgcaactgcgccgcagcttcgaactccaggtcgcgggcgaactgcatcattttctcttccaactgct      <  2:505830‑M2/147‑142 (MQ=255)
                                                                                                                                             cgcg‑GGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTATGAGGCTAGGCGATGGCGACCTTGGCACAGGTCt    <  1:844883/150‑1 (MQ=255)
                                                                                                                                              gcg‑GGCGCGCCCGCTCCCACATGGACCACGCTTGCCTg                                                                                                                   <  1:1350686/38‑1 (MQ=255)
                                                                                                                                              gcg‑GGCGCGCCCGCTCCCACATGGACCACGCTTGCCTg                                                                                                                   >  2:1350686/1‑38 (MQ=255)
                                                                                                                                              gcg‑GGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTATGAGGCTAGGCGATGGCGACCTTGGCACAGGTCta   >  2:215332/1‑150 (MQ=255)
                                                                                                                                               cg‑GGCGCGCCCGCTCCCACATGCACCACGCTTGCCTGGCATTTTTGTCCGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTATGAGGCTAGGCGATGGCGACCTTGGCACAGGTCtat  >  2:663221/1‑150 (MQ=255)
                                                                                                                                                   gcgcgcCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGAtt                                                                                     >  2:2038521/1‑64 (MQ=255)
                                                                                                                                                   gcgcgcCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGAtt                                                                                     <  1:2038521/64‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                 
GGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCG‑GGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTATGAGGCTAGGCGATGGCGACCTTGGCACAGGTCTAT  >  NC_002947/2301461‑2301753

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.