New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 3078370 =109 (1.240)6 (0.070) 6/238 NT 5.3% coding (939/1410 nt) PP_2688 hypothetical protein
?NC_002947 3078398 = 109 (1.290)coding (911/1410 nt) PP_2688 hypothetical protein

Only 100 of 124 total aligned reads displayed.

TTGACCACCAGTTCGGGCAGGTGGGCCAGTACATGGGACAGATCCGCCGGCTTGCGGCACTGCCAGGTCGGCACGTTGTTCAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTCGAGGTAGTCGTCGTCCAGGCGACGATAGATCACGTCCACCTG  >  NC_002947/3078221‑3078519
                                                                                                                                                     |                                                                                                                                                     
ttGACCACCAGTTCGGGCAGGTGGGCCAGTACATGGGACAGATCCGCCGGCTTGCGGCACTGCCAGGTCGGCACGTTGTTCAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCg                                                                                                                                                       >  1:1389831/1‑150 (MQ=255)
tacatgcgcaccactgccggcccccaacaggtggacgtgatctatcgtcgcctggacgacgactacctcgacccgctgtccttcaaccctgactcgatgctgggcgtaccggggctgatctcggtttaccgcgccggcaatgtggtactg                                                                                                                                                       <  1:2159842‑M1/1‑1 (MQ=255)
   atgcgcaccactgccggcccccaacaggtggacgtgatctatcgtcgcctggacgacgactacctcgacccgctgtccttcaaccctgactcgatgctgggcgtaccggggctgatctcggtttaccgcgccggcaatgtggtactGGcc                                                                                                                                                    <  1:2213609‑M1/4‑1 (MQ=255)
      accaGTTCGGGCAGGTGGGCCAGTACATGGGACAGATCCGCCGGCTTGCGGCACTGCCAGGTCGGCACGTTGTTCAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACg                                                                                                                                                 >  2:884269/1‑150 (MQ=255)
      accaGTTCGGGCAGGTGGGCCAGTACATGGGACAGATCCGCCGGCTTGCGGCACTGCCAGGTCGGCACGTTGTTCAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACg                                                                                                                                                 >  2:1531220/1‑150 (MQ=255)
          gTTCGGGCAGGTGGGCCAGTACATGGGACAGATCCGCCGGCTTGCGGCACTGCCAGGTCGGCACGTTGTTCAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAg                                                                                                                                             >  2:1336616/1‑150 (MQ=255)
          gTTCGGGCAGGTGGGCCAGTACATGGGACAGATCCGCCGGCTTGCGGCACTGCCAGGTCGGCACGTTGTTCAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAg                                                                                                                                             >  2:640892/1‑150 (MQ=255)
          ccactgccggcccccaacaggtggacgtgatctatcgtcgcctggacgacgactacctcgacccgctgtccttcaaccctgactcgatgctgggcgtaccggggctgatctcggtttaccgcgccggcaatgtggtactGGCCACGCCAg                                                                                                                                             <  2:1970814‑M1/11‑1 (MQ=255)
              gggCAGGTGGGCCAGTACATGGGACAGATCCGCCGGCTTGCGGCACTGCCAGGTCGGCACGTTGTTCAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCg                                                                                                                                                       <  2:1392576/136‑1 (MQ=255)
              gggCAGGTGGGCCAGTACATGGGACAGATCCGCCGGCTTGCGGCACTGCCAGGTCGGCACGTTGTTCAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCg                                                                                                                                                       >  1:1392576/1‑136 (MQ=255)
                    gTGGGCCAGTACATGGGACAGATCCGCCGGCTTGCGGCACTGCCAGGTCGGCACGTTGTTCAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGACGACGGc                                                                                                                                   >  2:1205622/1‑150 (MQ=255)
                            aggtggacgtgatctatcgtcgcctggacgacgactacctcgacccgctgtccttcaaccctgactcgatgctgggcgtaccggggctgatctcggtttaccgcgccggcaatgtggtactGGCCACGCCAGTGCCGACGGCGTTGGCCa                                                                                                                           >  1:1970814‑M1/122‑150 (MQ=255)
                                  gggACAGATCCGCCGGCTTGCGGCACTGCCAGGTCGGCACGTTGTTCAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACca                                                                                                                     >  1:304291/1‑150 (MQ=255)
                                    gACAGATCCGCCGGCTTGCGGCACTGCCAGGTCGGCACGTTGTTCAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACcaca                                                                                                                   >  2:674648/1‑150 (MQ=255)
                                     aCAGATCCGCCGGCTTGCGGCACTGCCAGGTCGGCACGTTGTTCAGGGTTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACAt                                                                                                                  >  1:1681410/1‑150 (MQ=255)
                                      cAGATCCGCCGGCTTGCGGCACTGCCAGGTCGGCACGTTGTTCAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACAtt                                                                                                                 <  2:466082/150‑1 (MQ=255)
                                       aGATCCGCCGGCTTGCGGCACTGCCAGGTCGGCACGTTGTTCAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACg                                                                                                                                     <  2:2320723/129‑1 (MQ=255)
                                       aGATCCGCCGGCTTGCGGCACTGCCAGGTCGGCACGTTGTTCAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACg                                                                                                                                     >  1:2320723/1‑129 (MQ=255)
                                       aGATCCGCCGGCTTGCGGCACTGCCAGGTCGGCACGTTGTTCAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTg                                                                                                                >  1:1875341/1‑150 (MQ=255)
                                        gATCCGCCGGCTTGCGGCACTGCCAGGTCGGCACGTTGTTCAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGc                                                                                                               <  1:640892/150‑1 (MQ=255)
                                          tCCGCCGGCTTGCGGCACTGCCAGGTCGGCACGTTGTTCAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCg                                                                                                             >  2:1734423/1‑150 (MQ=255)
                                          tCCGCCGGCTTGCGGCACTGCCAGGTCGGCACGTTGTTCAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCg                                                                                                             <  1:1734423/150‑1 (MQ=255)
                                            cgccgGCTTGCGGCACTGCCAGGTCGGCACGTTGTTCAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACAtt                                                                                                                 <  1:1245530/144‑1 (MQ=255)
                                            cgccgGCTTGCGGCACTGCCAGGTCGGCACGTTGTTCAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACAtt                                                                                                                 >  2:1245530/1‑144 (MQ=255)
                                             gccgGCTTGCGGCACTGCCAGGTCGGCACGTTGTTCAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGgcg                                                                                                          >  2:1583596/1‑150 (MQ=255)
                                             gccgGCTTGCGGCACTGCCAGGTCGGCACGTTGTTCAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGgcg                                                                                                          >  1:301284/1‑150 (MQ=255)
                                                ggCTTGCGGCACTGCCAGGTCGGCACGTTGTTCAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCgg                                                                                                       >  1:168775/1‑150 (MQ=255)
                                                   ttGCGGCACGGCCAGGTCGGCACGTTGTTCAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTaa                                                                                                    >  2:807185/1‑150 (MQ=255)
                                                     gCGGCACTGCCAGGTCGGCACGTTGTTCAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGc                                                                                                                                          >  1:561424/1‑110 (MQ=255)
                                                       ggCACTGCCAGGTCGGCACGTTGTTCAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAAcct                                                                                                >  2:929081/1‑149 (MQ=255)
                                                        gCACTGCCAGGTCGGCACGTTGTTCAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCTACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCga                                                                                               <  2:678781/150‑1 (MQ=255)
                                                        gCACTGCCAGGTCGGCACGTTGTTCAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCTACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCga                                                                                               >  1:678781/1‑150 (MQ=255)
                                                        gCACTGCCAGGTCGGCACGTTGTTCAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCga                                                                                               >  2:705580/1‑150 (MQ=255)
                                                            tGCCAGGTCGGCACGTTGTTCAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCg                                                                                                             >  2:2201661/1‑132 (MQ=255)
                                                            tGCCAGGTCGGCACGTTGTTCAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCg                                                                                                             <  1:2201661/132‑1 (MQ=255)
                                                            tGCCAGGTCGGCACGTTGTTCAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATc                                                                                           >  1:1445566/1‑150 (MQ=255)
                                                              ccAGGTCGGCACGTTGTTCAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAg                                                                                         >  2:703799/1‑150 (MQ=255)
                                                              ccAGGTCGGCACGTTGTTCAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATGTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAg                                                                                         >  1:1102327/1‑150 (MQ=255)
                                                               cAGGTCGGCACGTTGTTCAGGATTGGTTCTTCGCTCATGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGc                                                                                        <  1:1030629/150‑1 (MQ=255)
                                                                aGGTCGGCACGTTGTTCAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGcc                                                                                       >  1:205223/1‑150 (MQ=255)
                                                                  gTCGGCACGTTGTTCAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGc                                                                                                                             <  2:230269/110‑1 (MQ=255)
                                                                  gTCGGCACGTTGTTCAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGc                                                                                                                             >  1:230269/1‑110 (MQ=255)
                                                                        aagttgttCAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACg                                                                               >  1:1742433/3‑150 (MQ=255)
                                                                         cGTTGTTCAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGc                                                                              <  1:1531220/150‑1 (MQ=255)
                                                                         cGTTGTTCAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATAGGACACGCCAGTGCCGTGGGCGTGGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGc                                                                              <  1:872046/150‑1 (MQ=255)
                                                                           ttgttCAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGccc                                                                            <  2:1742433/150‑1 (MQ=255)
                                                                            tgttCAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCa                                                                           <  1:703799/150‑1 (MQ=255)
                                                                              ttCAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTg                                                                                                                               <  2:880771/96‑1 (MQ=255)
                                                                              ttCAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTg                                                                                                                               >  1:880771/1‑96 (MQ=255)
                                                                              ttCAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGc                                                                         >  2:1443149/1‑150 (MQ=255)
                                                                               tCAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCa                                                                        >  2:1734640/1‑150 (MQ=255)
                                                                                cAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCAt                                                                       >  2:1421251/1‑150 (MQ=255)
                                                                                 ttcaaccctgactcgatgctgggcgtaccggggctgatctcggtttaccgcgccggcaatgtggtactGGCCACGCCAGTGCCGACGGCGTTGGcc                                                                                                                            <  2:538052‑M1/28‑1 (MQ=255)
                                                                                 ttcaaccctgactcgatgctgggcgtaccggggctgatctcggtttaccgcgccggcaatgtggtactGGCCACGCCAGTGCCGACGGCGTTGGcc                                                                                                                            >  1:538052‑M1/69‑96 (MQ=255)
                                                                                 aGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATc                                                                      <  1:864230/150‑1 (MQ=255)
                                                                                   gATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGa                                                                    <  1:1944762/150‑1 (MQ=255)
                                                                                   gATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGa                                                                    <  1:674648/150‑1 (MQ=255)
                                                                                     ttGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGt                                                                  <  1:1734640/150‑1 (MQ=255)
                                                                                      tGGTTCTTCGCTCAGGTAAAAGCGGATCATGCCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTc                                                                 <  2:1875341/150‑1 (MQ=255)
                                                                                        gTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGgcgc                                                                                                         >  2:1567785/1‑108 (MQ=255)
                                                                                        gTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGgcgc                                                                                                         <  1:1567785/108‑1 (MQ=255)
                                                                                        gTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAg                                                               >  1:1097069/1‑150 (MQ=255)
                                                                                          tcttcGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAggg                                                             <  1:2289553/150‑1 (MQ=255)
                                                                                           cttcGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGt                                                            <  2:1102327/150‑1 (MQ=255)
                                                                                            ttcGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGtt                                                           >  1:2315780/1‑150 (MQ=255)
                                                                                               gCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGaa                                                        >  2:2213609/1‑150 (MQ=255)
                                                                                               gCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGaa                                                        <  1:1421251/150‑1 (MQ=255)
                                                                                               gCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGaa                                                        <  1:2185284/150‑1 (MQ=255)
                                                                                               gCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGaa                                                        <  2:205223/150‑1 (MQ=255)
                                                                                                 tCAGGTAAAAGCGGATCATATCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAgg                                                      >  1:1633622/1‑150 (MQ=255)
                                                                                                     gTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGc                                                                                        <  2:1623722/112‑1 (MQ=255)
                                                                                                       aaaaGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCg                                                <  2:301284/150‑1 (MQ=255)
                                                                                                        aaaGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTAAGCCCAGCATCGAGTCAGGGTTGAAGGACAGCgg                                               <  2:1389831/150‑1 (MQ=255)
                                                                                                         aaGCGGATCATGTCGTCGACGAAGGGGGAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGACCAGCATCGAGTCAGGGTTGAAGGACAGCggg                                              >  2:1103226/1‑150 (MQ=255)
                                                                                                           gCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACca                                                                                                                     <  2:439203/77‑1 (MQ=255)
                                                                                                           gCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACca                                                                                                                     >  1:439203/1‑77 (MQ=255)
                                                                                                              gATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTCGAg                                         <  1:705580/150‑1 (MQ=255)
                                                                                                               aTCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTCGAgg                                        >  1:1216803/1‑150 (MQ=255)
                                                                                                                 cATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGTCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTCGAGGTa                                      <  1:2152193/150‑1 (MQ=255)
                                                                                                                 cATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTCGAGGTa                                      <  1:807185/150‑1 (MQ=255)
                                                                                                                 cATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTCGAGGTa                                      >  1:1050401/1‑150 (MQ=255)
                                                                                                                   tgatctcggtttaccgcgccggcaatgtggtactGGCCACGCCAGTGCCGACGGCGTTGGCCAGTa                                                                                                                        >  1:1338681‑M1/35‑66 (MQ=255)
                                                                                                                     tcgtcgACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTCGAg                                         <  1:1289535/143‑1 (MQ=255)
                                                                                                                     tcgtcgACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTCGAg                                         >  2:1289535/1‑143 (MQ=255)
                                                                                                                     tcgtcgACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTCGAGGTAgtcg                                  >  1:381556/1‑150 (MQ=255)
                                                                                                                       gtcgACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTCGAGGTAgtcgtc                                <  1:1583596/150‑1 (MQ=255)
                                                                                                                       gtcgACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTCGAGGTAgtcgtc                                <  1:1030478/150‑1 (MQ=255)
                                                                                                                         cgacgaAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTCGAgg                                        >  2:1214521/1‑140 (MQ=255)
                                                                                                                         cgacgaAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTCGAgg                                        <  1:1214521/140‑1 (MQ=255)
                                                                                                                            cgaAGGGGTAGATGGATTTGTCATCGGAAAAGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTCGAGGTAGTCGTCGTCCa                           <  2:381556/150‑1 (MQ=255)
                                                                                                                               aGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTCGAGGTAGTCGTCGTCCAGGc                        <  1:1708558/150‑1 (MQ=255)
                                                                                                                                   gTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCATATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATc                                                                      <  1:2219207/100‑1 (MQ=255)
                                                                                                                                   gTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGAt                                                                                            <  2:574710/78‑1 (MQ=255)
                                                                                                                                   gTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGAt                                                                                            >  1:574710/1‑78 (MQ=255)
                                                                                                                                     aGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTCGAGGTAGTCGTCGTCCAGGCGACGAt                  <  1:884269/150‑1 (MQ=255)
                                                                                                                                      gATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTCGAGGTAGTCGTCGTCCAGGCGACGATa                 >  2:629482/1‑150 (MQ=255)
                                                                                                                                         ggATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTCGAGGTAGTCGTCGTCCAGGCGACGATAGAt              <  2:2281707/150‑1 (MQ=255)
                                                                                                                                           aTTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTCGAGGTAGTCGTCGTCCAGGCGACGATAGATCa            <  2:2171833/150‑1 (MQ=255)
                                                                                                                                                 cATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTCGAGGTAGTCGTCGTCCAGGCGACGATAGATCACGTCCa      >  2:608383/1‑150 (MQ=255)
                                                                                                                                                     GGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTCGAGGTAGTCGTCGTCCAGGCGACGATAGATCACGTCCACCTg  <  2:1249690‑M1/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
TTGACCACCAGTTCGGGCAGGTGGGCCAGTACATGGGACAGATCCGCCGGCTTGCGGCACTGCCAGGTCGGCACGTTGTTCAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTCGAGGTAGTCGTCGTCCAGGCGACGATAGATCACGTCCACCTG  >  NC_002947/3078221‑3078519

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.