New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 3078370 =109 (1.240)6 (0.070) 6/238 NT 5.3% coding (939/1410 nt) PP_2688 hypothetical protein
?NC_002947 3078398 = 109 (1.290)coding (911/1410 nt) PP_2688 hypothetical protein

Only 100 of 133 total aligned reads displayed.

TACATGGGACAGATCCGCCGGCTTGCGGCACTGCCAGGTCGGCACGTTGTTCAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTCGAGGTAGTCGTCGTCCAGGCGACGATAGATCACGTCCACCTGTTGGGGGCCGGCAGTGGTGCGCATGTAG  >  NC_002947/3078250‑3078547
                                                                                                                                                    |                                                                                                                                                     
tACATGGTACAGATCCGCCGGCTTGCGGCACTGCCAGGTCGGCACGTTGTTGAGGAGTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAg                                                                                                                                                      >  1:2281707/1‑150 (MQ=255)
     gggACAGATCCGCCGGCTTGCGGCACTGCCAGGTCGGCACGTTGTTCAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACca                                                                                                                                                 >  1:304291/1‑150 (MQ=255)
        aCAGATCCGCCGGCTTGCGGCACTGCCAGGTCGGCACGTTGTTCAGGGTTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACAt                                                                                                                                              >  1:1681410/1‑150 (MQ=255)
         cAGATCCGCCGGCTTGCGGCACTGCCAGGTCGGCACGTTGTTCAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACAtt                                                                                                                                             <  2:466082/150‑1 (MQ=255)
          aGATCCGCCGGCTTGCGGCACTGCCAGGTCGGCACGTTGTTCAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTg                                                                                                                                            >  1:2171833/1‑150 (MQ=255)
          aGATCCGCCGGCTTGCGGCACTGCCAGGTCGGCACGTTGTTCAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTg                                                                                                                                            >  1:1875341/1‑150 (MQ=255)
             tCCGCCGGCTTGCGGCACTGCCAGGTCGGCACGTTGTTCAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCg                                                                                                                                         <  1:1734423/150‑1 (MQ=255)
               cgccgGCTTGCGGCACTGCCAGGTCGGCACGTTGTTCAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACAtt                                                                                                                                             >  2:1245530/1‑144 (MQ=255)
                gccgGCTTGCGGCACTGCCAGGTCGGCACGTTGTTCAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGgcg                                                                                                                                      >  1:301284/1‑150 (MQ=255)
                gccgGCTTGCGGCACTGCCAGGTCGGCACGTTGTTCAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGgcg                                                                                                                                      >  2:1583596/1‑150 (MQ=255)
                   ggCTTGCGGCACTGCCAGGTCGGCACGTTGTTCAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCgg                                                                                                                                   >  1:168775/1‑150 (MQ=255)
                      ttGCGGCACGGCCAGGTCGGCACGTTGTTCAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTaa                                                                                                                                >  2:807185/1‑150 (MQ=255)
                          ggCACTGCCAGGTCGGCACGTTGTTCAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAAcct                                                                                                                            >  2:929081/1‑149 (MQ=255)
                           gCACTGCCAGGTCGGCACGTTGTTCAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCTACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCga                                                                                                                           <  2:678781/150‑1 (MQ=255)
                           gCACTGCCAGGTCGGCACGTTGTTCAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCga                                                                                                                           >  2:705580/1‑150 (MQ=255)
                               tGCCAGGTCGGCACGTTGTTCAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCg                                                                                                                                         <  1:2201661/132‑1 (MQ=255)
                               tGCCAGGTCGGCACGTTGTTCAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCg                                                                                                                                         >  2:2201661/1‑132 (MQ=255)
                               tGCCAGGTCGGCACGTTGTTCAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATc                                                                                                                       >  1:1445566/1‑150 (MQ=255)
                                 ccAGGTCGGCACGTTGTTCAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAg                                                                                                                     >  2:703799/1‑150 (MQ=255)
                                  cAGGTCGGCACGTTGTTCAGGATTGGTTCTTCGCTCATGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGc                                                                                                                    <  1:1030629/150‑1 (MQ=255)
                                   aGGTCGGCACGTTGTTCAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGcc                                                                                                                   >  1:205223/1‑150 (MQ=255)
                                           aCGTTGTTCAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCACCGGTACg                                                                                                           >  1:1712657/1‑150 (MQ=255)
                                            cGTTGTTCAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGc                                                                                                          <  1:1531220/150‑1 (MQ=255)
                                            cGTTGTTCAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATAGGACACGCCAGTGCCGTGGGCGTGGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGc                                                                                                          <  1:872046/150‑1 (MQ=255)
                                              ttgttCAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGccc                                                                                                        <  2:1742433/150‑1 (MQ=255)
                                               tgttCAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCa                                                                                                       <  1:703799/150‑1 (MQ=255)
                                                 ttCAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGc                                                                                                     >  2:1443149/1‑150 (MQ=255)
                                                  tCAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCa                                                                                                    >  2:1734640/1‑150 (MQ=255)
                                                   cAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCAt                                                                                                   >  2:1421251/1‑150 (MQ=255)
                                                      gATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGa                                                                                                <  1:674648/150‑1 (MQ=255)
                                                      gATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGa                                                                                                <  1:1944762/150‑1 (MQ=255)
                                                        ttGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGt                                                                                              <  1:1734640/150‑1 (MQ=255)
                                                         tGGTTCTTCGCTCAGGTAAAAGCGGATCATGCCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTc                                                                                             <  2:1875341/150‑1 (MQ=255)
                                                           gTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGgcgc                                                                                                                                     >  2:1567785/1‑108 (MQ=255)
                                                           gTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCa                                                                                            >  1:647462/1‑149 (MQ=255)
                                                           gTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCa                                                                                            <  2:647462/149‑1 (MQ=255)
                                                           gTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAg                                                                                           >  1:1097069/1‑150 (MQ=255)
                                                           gTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATAGAGTCAg                                                                                           >  1:88579/1‑150 (MQ=255)
                                                             tcttcGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAggg                                                                                         <  1:2289553/150‑1 (MQ=255)
                                                              cttcGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGt                                                                                        <  2:1102327/150‑1 (MQ=255)
                                                               ttcGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGtt                                                                                       >  1:2315780/1‑150 (MQ=255)
                                                                  gCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGaa                                                                                    <  1:1421251/150‑1 (MQ=255)
                                                                  gCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGaa                                                                                    <  2:205223/150‑1 (MQ=255)
                                                                        gTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGc                                                                                                                    <  2:1623722/112‑1 (MQ=255)
                                                                        gTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGc                                                                                                                    >  1:1623722/1‑112 (MQ=255)
                                                                          aaaaGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCg                                                                            <  2:301284/150‑1 (MQ=255)
                                                                           aaaGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTAAGCCCAGCATCGAGTCAGGGTTGAAGGACAGCgg                                                                           <  2:1389831/150‑1 (MQ=255)
                                                                              gCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACca                                                                                                                                                 >  1:439203/1‑77 (MQ=255)
                                                                                ggATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTCGa                                                                      <  2:304291/150‑1 (MQ=255)
                                                                                 gATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTCGAg                                                                     <  1:705580/150‑1 (MQ=255)
                                                                                  aTCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTCGAgg                                                                    >  1:1216803/1‑150 (MQ=255)
                                                                                    cATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGTCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTCGAGGTa                                                                  <  1:2152193/150‑1 (MQ=255)
                                                                                    cATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTCGAGGTa                                                                  <  1:807185/150‑1 (MQ=255)
                                                                                    cATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTCGAGGTa                                                                  >  1:1050401/1‑150 (MQ=255)
                                                                                      tgatctcggtttaccgcgccggcaatgtggtactGGCCACGCCAGTGCCGACGGCGTTGGCCAGTa                                                                                                                                                    >  1:1338681‑M1/35‑66 (MQ=255)
                                                                                      tgatctcggtttaccgcgccggcaatgtggtactGGCCACGCCAGTGCCGACGGCGTTGGCCAGTa                                                                                                                                                    <  2:1338681‑M1/32‑1 (MQ=255)
                                                                                       gttgtcgACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGGCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTCGAGGTAgtc                                                               <  1:1205622/147‑1 (MQ=255)
                                                                                        tcgtcgACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTCGAg                                                                     >  2:1289535/1‑143 (MQ=255)
                                                                                        tcgtcgACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTCGAg                                                                     <  1:1289535/143‑1 (MQ=255)
                                                                                        tcgtcgACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTCGAGGTAgtcg                                                              >  1:381556/1‑150 (MQ=255)
                                                                                          gtcgACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTCGAGGTAgtcgtc                                                            <  1:1583596/150‑1 (MQ=255)
                                                                                          gtcgACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTCGAGGTAgtcgtc                                                            <  1:1030478/150‑1 (MQ=255)
                                                                                            cgacgaAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTCGAgg                                                                    <  1:1214521/140‑1 (MQ=255)
                                                                                            cgacgaAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTCGAgg                                                                    >  2:1214521/1‑140 (MQ=255)
                                                                                               cgaAGGGGTAGATGGATTTGTCATCGGAAAAGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTCGAGGTAGTCGTCGTCCa                                                       <  2:381556/150‑1 (MQ=255)
                                                                                                  aGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTCGAGGTAGTCGTCGTCCAGGc                                                    <  2:1216803/150‑1 (MQ=255)
                                                                                                      gTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCATATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATc                                                                                                  >  2:2219207/1‑100 (MQ=255)
                                                                                                      gTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGAt                                                                                                                        >  1:574710/1‑78 (MQ=255)
                                                                                                        aGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTCGAGGTAGTCGTCGTCCAGGCGACGAt                                              <  1:884269/150‑1 (MQ=255)
                                                                                                         gATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTCGAGGTAGTCGTCGTCCAGGCGACGATa                                             >  2:629482/1‑150 (MQ=255)
                                                                                                            ggATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTCGAGGTAGTCGTCGTCCAGGCGACGATAGAt                                          <  2:2281707/150‑1 (MQ=255)
                                                                                                              aTTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTCGAGGTAGTCGTCGTCCAGGCGACGATAGATCa                                        <  2:2171833/150‑1 (MQ=255)
                                                                                                                    tactggccaacgccgtcggcactggcgtggccAGTACCACATTGCCGGCGCGGTAAACCGAGATCa                                                                                                                      <  2:1338681‑M2/34‑1 (MQ=255)
                                                                                                                    tactggccaacgccgtcggcactggcgtggccAGTACCACATTGCCGGCGCGGTAAACCGAGATCa                                                                                                                      >  1:1338681‑M2/33‑66 (MQ=255)
                                                                                                                    cATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTCGAGGTAGTCGTCGTCCAGGCGACGATAGATCACGTCCa                                  >  2:608383/1‑150 (MQ=255)
                                                                                                                     aTCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTCGAGGTAGTCGTCGTCCAGGCGACGATAGATCACGTCCAc                                 >  2:1687348/1‑150 (MQ=255)
                                                                                                                       tggccaacgccgtcggcactggcgtggccAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTCGAGGTAGTCGTCGTCCAGGCGACGATAGATCACGTCCACCt                               >  1:1970814‑M2/30‑150 (MQ=255)
                                                                                                                        ggccaacgccgtcggcactggcgtggccAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGaa                                                                                    <  2:538052‑M2/68‑1 (MQ=255)
                                                                                                                        ggccaacgccgtcggcactggcgtggccAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGaa                                                                                    >  1:538052‑M2/29‑96 (MQ=255)
                                                                                                                         GCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTCGAGGTAGTCGTCGTCCAGGAGACGATAGATCACGTCCACCTGt                             <  1:2002600‑M1/150‑1 (MQ=255)
                                                                                                                         GCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTAGGTGTGGTCGTCGTCCAGGCGACGATAGATCACGTCCACCTGt                             <  1:1551707‑M1/150‑1 (MQ=255)
                                                                                                                          CCACGCCAGTGCCGACGACGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTCGAGGTAGTCGTCGTCCAGGCGACGATAGATCACGTCCACCTGtt                            <  1:1657193‑M1/150‑1 (MQ=255)
                                                                                                                            ACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTCGAGGTAgtcgtc                                                            >  1:1631657‑M1/1‑116 (MQ=255)
                                                                                                                             cGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTCGAGGTAGTCGTCGTCCAGGCGACGATAGATCACGTCCACCTGTTggg                         <  2:1097069/150‑1 (MQ=255)
                                                                                                                                cAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTCGAGGTa                                                                  >  2:209418/1‑106 (MQ=255)
                                                                                                                                   tGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTCGAGGTAGTCGTCGTCCAGGCGACGATAGATCACGTCCACCTGTTGGGGGCCgg                   <  2:2315780/150‑1 (MQ=255)
                                                                                                                                   ggCCGACGGCGTTGGCCAGTATCACATTGCCGGCCCGGTCAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTCGAGGTAGTCGTCGTCCAGGCGACGATAGATCACGTCCACCTGTTGGGGGccat                   <  1:1248830/149‑3 (MQ=255)
                                                                                                                                    gCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTCGAGGTAGTCGTCGTCCAGGCGACGATa                                             <  2:2190605/123‑1 (MQ=255)
                                                                                                                                    gCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTCGAGGTAGTCGTCGTCCAGGCGACGATa                                             >  1:2190605/1‑123 (MQ=255)
                                                                                                                                      cGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGAATCGACTCAGGGTTGAAGGACAGCGGGTCGGGGTAGTCGTCGTCCAGGCGACGATAGATCACGTCCACCTGTTGGGGGCCGGCAg                >  2:562365/1‑150 (MQ=255)
                                                                                                                                       gACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTCGAGGTAGTCGTCGTCCAGGCGACGATAGATCACGTCCACCTGTTGGGGGCCGGCAgt               >  2:1648456/1‑150 (MQ=255)
                                                                                                                                       gACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTCGAGGTAGTCGTCGTCCAGGCGACGATAGATCACGTCCACCTGTTGGGGGCCGGCAgt               >  1:655858/1‑150 (MQ=255)
                                                                                                                                        aCGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCACCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTCGAGGTAGTCGTCGTCCAGGCGACGATAGATCACGTCCACCTGTTGGGGGCCGGCAgtg              <  2:1712657/150‑1 (MQ=255)
                                                                                                                                         ctggcgtggccAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTCGAGGTAGTCGTCGTCCAGGCGACGATAGATCACGTCCACCTGTTGGGGGCCGGCAgtgg             <  2:1970814‑M2/139‑1 (MQ=255)
                                                                                                                                          ggCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTCGAGGTAGTCGTCGTCCAgg                                                     >  2:961291/1‑109 (MQ=255)
                                                                                                                                          ggCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTCGAGGTAGTCGTCGTCCAgg                                                     <  1:961291/109‑1 (MQ=255)
                                                                                                                                                ggccAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTCGAGGTAGTCGTCGTCCAGGCGACGATAGATCACGTCCACCTGTTGGGGGCCGGCAGTGGTGCGCAt      <  1:2213609‑M2/146‑1 (MQ=255)
                                                                                                                                                 gccAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTCGAGGTAGTCGTCGTCCAGGCGACGATAGATCACGTCCACCTGTTGGGGGCCGGCAGTGGTGCGCATg     >  1:188782‑M2/4‑150 (MQ=255)
                                                                                                                                                   cAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTCGAGGTAGTCGTCGTCCAGGCGACGATAGATCACGTCCACCTGTTGGGGGCCGGCAGTGGTGCGCATGTa   <  1:2159842‑M2/149‑1 (MQ=255)
                                                                                                                                                    aGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTCGAGGTAGTCGTCGTCCAGGCGACGATAGATCACGTCCACCTGTTGGGGGTCGGCAGTGGTGCGCATGTAg  >  1:1271670/1‑150 (MQ=255)
                                                                                                                                                    |                                                                                                                                                     
TACATGGGACAGATCCGCCGGCTTGCGGCACTGCCAGGTCGGCACGTTGTTCAGGATTGGTTCTTCGCTCAGGTAAAAGCGGATCATGTCGTCGACGAAGGGGTAGATGGATTTGTCATCGGCCACGCCAGTGCCGACGGCGTTGGCCAGTACCACATTGCCGGCGCGGTAAACCGAGATCAGCCCCGGTACGCCCAGCATCGAGTCAGGGTTGAAGGACAGCGGGTCGAGGTAGTCGTCGTCCAGGCGACGATAGATCACGTCCACCTGTTGGGGGCCGGCAGTGGTGCGCATGTAG  >  NC_002947/3078250‑3078547

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.