New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 3366596 =92 (1.040)25 (0.290) 23/244 NT 25.6% intergenic (+219/‑142) PP_2962/PP_2964 alcohol dehydrogenase/transposase
?NC_002947 4970500 = 55 (0.630)intergenic (‑213/+181) fliC/PP_4379 flagellin/3‑oxoacyl‑ACP synthase

Only 100 of 131 total aligned reads displayed.

CATGAAAGTCGTTCCTTGACGTGAGGGGCTTTGTTCCAGGCGGTGCCGGCGGCCGGTCAAGCTGGCTGCAGTCGAAGTGGTGACTTCGTCGCTACTGTCGGGAGGAAAGGGTGAGGCAGAAAAATCGATCATTCACGCGGGGTTATACCGGGGTTATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGATGTGTT  >  NC_002947/3366447‑3366744
                                                                                                                                                     |                                                                                                                                                    
accgcccggcgcttttttttctgccgaaaataagcttctgcctaacgcagcccattgtaggagcgggttcacccgcgaacaccggcaaagccggtgccacccatcgcgtctccttcttcgcagcctcacccgctccaccgacgggatgag                                                                                                                                                      >  2:1657608‑M1/150‑150 (MQ=255)
  tGAAAGTCGTTCCTTGACGTGAGGGGCTTTGTTCCAGGCGGTGCCGGCGGCCGGTCAAGCTGGCTGCAGTCGAAGTGGTGACTTCGTCGCTACTGTCGGGAGGAAAGGGTGAGGCAGAAAAATCGATCATTCACGCGGGGTTATACCggg                                                                                                                                                    <  1:772922/150‑1 (MQ=255)
  tGAAAGTCGTTCCTTGACGTGAGGGGCTTTGTTCCAGGCGGTGCCGGCGGCCGGTCAAGCTGGCTGCAGTCGAAGTGGTGACTTCGTCGCTACTGTCGGGAGGAAAGGGTGAGGCAGAAAAATCGATCATTCACGCGGGGTTATACCggg                                                                                                                                                    <  1:1129937/150‑1 (MQ=255)
  tGAAAGTCGTTCCTTGACGTGAGGGGCTTTGTTCCAGGCGGTGCCGGCGGCCGGTCAAGCTGGCTGCAGTCGAAGTGGTGACTTCGTCGCTACTGTCGGGAGGAAAGGGTGAGGCAGAAAAATCGATCATTCACGCGGGGTTATACCggg                                                                                                                                                    >  2:1129937/1‑150 (MQ=255)
   gAAAGTCGTTCCTTGACGTGAGGGGCTTTGTTCCAGGCGGTGCCGGCGGCCGGTCAAGCTGGCTGCAGTCGAAGTGGTGACTTCGTCGCTACTGTCGGGAGGAAAGGGTGAGGCAGAAAAATCGATCATTCACGCGGGGTTATACGgggg                                                                                                                                                   >  2:2121470/1‑150 (MQ=255)
   gAAAGTCGTTCCTTGACGTGAGGGGCTTTGTTCCAGGCGGTGCCGGCGGCCGGTCAAGCTGGCTGCAGTCGAAGTGGTGACTTCGTCGCTACTGTCGGGAGGAAAGGGTGAGGCAGAAAAATCGATCATTCACGCGGGGTTATACCgggg                                                                                                                                                   >  1:1044516/1‑150 (MQ=255)
   gAAAGTCGTTCCTTGACGTGAGGGGCTTTGTTCCAGGCGGTGCCGGCGGCCGGTCAAGCTGGCTGCAGTCGAAGTGGTGACTTCGTCGCTACTGTCGGGAGGAAAGGGTGAGGCAGAAAAATCGATCATTCACGCGGGGTTATACCgggg                                                                                                                                                   >  1:1886818/1‑150 (MQ=255)
    aaaGTCGTTCCTTGACGTGAGGGGCTTTGTTCCAGGCGGTGCCGGCGGCCGGTCAAGCTGGCTGCAGTCGAAGTGGTGACTTCGTCGCTACTGTCGGGAGGAAAGGGGGGGGCAGAAAAATCGATCATTCAAGCGGGGTTATACCGGGGt                                                                                                                                                  >  2:1479921/1‑150 (MQ=255)
        tCGTTCCTTGACGTGAGGGGCTTTGTTCCAGGCGGTGCCGGCGGCCGGTCAAGCTGGCTGCAGTCGAAGTGGTGACTTCGTCGCTACTGTCGGGAGGAAAGGGTGAGGCAGAAAAATCGATCATTCACGCGGGGTTATACCGGGGTTATg                                                                                                                                              <  2:2163102/150‑1 (MQ=255)
          gcttttttttctaccgaaaacaagcttctggctaacgcagcccattgtaggagcgggttcacccgcgaacaccggcaaagccggtgccacccatcgcctctccttcttcgcagcctcacccgctccaccgacgggatgaGGGGTTATGcc                                                                                                                                            >  1:260461‑M1/140‑150 (MQ=255)
           ttCCTTGACGTGAGGGGCTTTGTTCCAGGCGGTGCCGGCGGCCGGTCAAGCTGGCTGCAGTCGAAGTGGTGACTTCGTCGCTACTGTCGGGAGGAACGGGTGAGGCAGAAAAATCGATCATTCACGCGGGGTTATACGGGGGTTATGCCg                                                                                                                                           >  1:2228408/1‑150 (MQ=255)
           ttCCTTGACGTGAGGGGCTTTGTTCCAGGCGGTGCCGGCGGCCGGTCAAGCTGGCTGCAGTCGAAGTGGTGACTTCGTCGCTACTGTCGGGAGGAAAGGGTGAGGCAGAAAAATCGATCATTCACGCGGGGTTATACCGGGGTTATGCCg                                                                                                                                           >  1:1427587/1‑150 (MQ=255)
            tCCTTGACGTGAGGGGCTTTGTTCCAGGCGGTGCCGGCGGCCGGTCAAGCTGGCTGCAGTCGAAGTGGTGACTTCGTCGATACTGTCGGGAGGAAAGGGTGAGGCAGAAAAATCGATCATTCACGCGGGGTTATACCGGGGTTATGCCga                                                                                                                                          <  1:1479921/150‑1 (MQ=255)
              cTTGACGTGAGGGGCTTTGTTCCACGCGGTGCCGGCGGCCGGTCAAGCTGGCTGCAGTCGACGTGGTGACTTCGTCGCCACTGCCGGGAGGCAAGGGTGCGGCAGAAAAACCAACCATCCACGCGGGGCTATACCGGGGCTATGCCgaga                                                                                                                                        >  1:457530/1‑150 (MQ=255)
               ttGACGTGAGGGGCTTTGTTCCAGGCGGTGCCGGCGGCCGGTCAAGCTGGCTGCAGTCGAAGTGGTGACTTCGTCGCCGGCACTGAAAGGAAAGGGTGAGTCGGAAAAATCGATCATTCACGCGGGGTTATACCGGGGTTATGCCGAGAt                                                                                                                                       >  1:632670/1‑150 (MQ=255)
                ttttctgccgaaaataagcttctgcctaacgcagcccattgtaggagcgggttcacccgcgaacaccggcaaagccggtgccacccatcgcgtctccttcttcgcagcctcacccgctccaccgacgggatgaGGGGTTATGCCGAGATa                                                                                                                                      <  2:1291995‑M1/17‑1 (MQ=255)
                 gACGTGAGGGGCTTTGTTCCAGGCGGTGCCGGCGGCCGGTCAAGCTGGCTGCAGTCGAAGTGGTGACTTCGTCGCTACTGTCGGGAGGAAAGGGTGAGGCAGAAAAATCGATCATTCACGCGGGGTTATACCGGGGTTATGCCGAGATaa                                                                                                                                     >  1:400776/1‑150 (MQ=255)
                 gACGTGAGGGGCTTTGTTCCAGGCGGTGCCGGCGGCCGGTCAAGCTGGCTGCAGTCGAAGTGGTGACTTCGTCGCTACTGTCGGGAGGAAAGGGTGAGGCAGAAAAATCGATCATTCACGCGGGGTTATACCGGGGTTATGCCGAGATaa                                                                                                                                     <  2:100220/150‑1 (MQ=255)
                  ttctgccgaaaataagcttctgcctaacgcagcccattgtaggagcgggttcacccgcgaacaccggcaaagccggtgccacccatcgcgtctccttcttcgcagcctcacccgctccaccgacgggatgaGGGGTTATGCCGAGATAAg                                                                                                                                    <  2:1318575‑M1/19‑1 (MQ=255)
                  aCGTGAGGGGCTTTGTTCCAGGCGGTGCCGGCGGCCGGTCAAGCTGGCTGCAGTCGAAGTGGTGACTTCGTCGCTACTGTCGGGAGGAAAGGGTGAGGCAGAAAAATCGATCATTCACGCGGGGTTATACCGGGGTTATGCCGAGATAAg                                                                                                                                    <  1:493294/150‑1 (MQ=255)
                  aCGTGAGGGGCTTTGTTCCAGGCGGTGCCGGCGGCCGGTCAAGCTGGCTGCAGTCGAAGTGGTGACTTCGTCGCTACTGTCGGGAGGAAAGGGTGAGGCAGAAAAATCGATCATTCACGCGGGGTTATACCGGGGTTATGCCGAGATAAg                                                                                                                                    <  1:1792616/150‑1 (MQ=255)
                   cggcagaaaaaaaagcttctgcctaacgcagcccattgtaggagcgggttcacccgcgaacaccggcaaagccggtgccacccatcgcgtctccttcttcgcagcctcacccgctccaccgacgggatgaGGGGTTATGCCGAGATAAgg                                                                                                                                   <  2:835178‑M1/20‑1 (MQ=255)
                     tGAGGGGCTTTGTTCCAGGCGGTGCCGGCGGCCGGTCAAGCTGGCTGCAGTCGAAGTGGTGACTTCGTCGCTACTGTCGGGAGGAAAGGGTGAGGCAGAAAAATCGATCATTCACGCGGGGTTATACCGGGGTTATGCCGAGATaa                                                                                                                                     <  1:1986792/146‑1 (MQ=255)
                         gggCTTTGTTCCAGGCGGTGCCGGCGGCCGGTCAAGCTGGCTGCAGTCGAAGTGGTGACTTCGTCGCTACTGTCGGGAGGAAAGGGTGAGGAAGAAAAATCGATCATTCACGCGGGGTTATACCGGGGTTATGCCGAGATAAGGCaaaaa                                                                                                                             >  1:1861981/1‑150 (MQ=255)
                           aaataagcttctgcctaacgcagcccattgtaggagcgggttcacccgcgaacaccggcaaagccggtgccacccatcgcgtctccttcttcgcagcctcacccgctccaccgacgggatgaGGGGTTATGCCGAGATAAGGCAAAAAtt                                                                                                                           <  1:915605‑M1/28‑1 (MQ=255)
                            cTTTGTTCCAGGCGGTGCCGGCGGCCGGTCAAGCTGGCTGCAGTCGAAGTGGTGACTTCGTCGCTACTGTCGGGAGGAAAGGGTGAGGCAGAAAAATCGATCATTCACGCGGGGTTATACCGGGGTTATGCCGAGATAAGGCAAAAATTa                                                                                                                          >  2:2305789/1‑150 (MQ=255)
                            cTTTGTTCCAGGCGGTGCCGGCGGCCGGTCAAGCTGGCTGCAGTCGAAGTGGTGACTTCGTCGCTACTGTCGGGAGGAAAGGGTGAGGCAGAAAAATCGATCATTCACGCGGGGTTATACCGGGGTTATGCCGAGATAAGGCAAAAATTa                                                                                                                          <  2:1044516/150‑1 (MQ=255)
                             tttGTTCCAGGCGGTGCCGGCGGCCGGTCAAGCTGGCTGCAGTCGAAGTGGTGACTTCGTCGCTACTGTCGGGAGGAAAGGGTGAGGCAGAAAAATCGATCATTCACGCGGGGTTATACCGGGGTTATGCCGAGATAAGGCAAAAATTAg                                                                                                                         >  1:2104810/1‑150 (MQ=255)
                              tcgTTCGAGGCGGGGCCGGCGGTCGGTCAAGCTGGCTGCAGTGGAAGTGGTGACTTCGTCGCTACTGTCGGGAGGAAAGGGTGAGGCAGAAAAATCGATCATTCACGCGGGGTTATACCGGGGTTATGCCGAGATAAGGCAAAAATTAgg                                                                                                                        <  2:457530/148‑1 (MQ=255)
                                   ccAGGCGGTGCCGGCGGCCGGTCAAGCTGGCTGCAGTCGAAGTGGTGACTTCGTCGCTACTGTCGGGAGGAAAGGGTGAGGCAGAAAAATCGATCATTCACGCGGGGTTATACCGGGGTTATGCCGAGATAAGGCAAAAATTAGGACAtt                                                                                                                   <  1:2305789/150‑1 (MQ=255)
                                    cAGGCGGTGCCGGCGGCCGGTCAAGCTGGCTGCAGTCGAAGTGGTGACTTCGTCGCTACTGTCGGGAGGAAAGGGTGAGGCAGAAAAATCGATCATTCACGCGGGGTTATACCGGGGTTATGCCGAGATAAGGCAAAAATTAGGACATTc                                                                                                                  <  1:630919/150‑1 (MQ=255)
                                      ggcctaacgcagcccatggtaggagcgggttcacccgcgaacaccggcaaagccggtgccacccatcgcgtctccttcttcgcagcctcacgcgctccaccgacgggatgaGGGGTTATGCCGAGATAAGGCAAAAATTAGGACATTCGt                                                                                                                >  2:657918‑M1/112‑150 (MQ=255)
                                      ggCGGTGCCGGCGGCCGGTCAAGCTGGCTGCAGTCGAAGTGGTGACTTCGTCGCTACTGTCGGGAGGAAAGGGTGAGGCAGAAAAATCGATCATTCACGCGGGGTTATACCGGGGTTATGCCGAGATAAg                                                                                                                                    <  1:312011/130‑1 (MQ=255)
                                       gCGGTGCCGGCGGCCGGTCAAGCTGGCTGCAGTCGAAGTGGTGACTTCGTCGCTACTGTCGGGAGGAAAGGGTGAGGCAGAAAAATCGATCATTCACGCGGGGTTATACCGGGGTTATGCCGAGATAAGGCAAAAATTAGGACATTCGtt                                                                                                               <  2:869861/150‑1 (MQ=255)
                                         ggTGCCGGCGGCCGGTCAAGCTGGCTGCAGTCGAAGTGGTGACTGCGTCGCTACTGTCGGGAGGAAAGGGTGAGGCAGAAAAATCGATCATTCACGCGGGGTTATACCGGGGTTATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCt                                                                                                             >  2:1692710/1‑150 (MQ=255)
                                          taacgcagcccattgtaggagcgggttcacccgcgaacaccggcaaagccggtgccacccatcgcgtctccttcttcgcagcctcacccgctccaccgacgggatgaGGGGTTATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTg                                                                                                            <  2:1584422‑M1/43‑1 (MQ=255)
                                           tGCCGGCGGCCGGTCAAGCTGGCTGCAGTCGAAGTGGTGACTTCGTCGCTACTGTCGGGAGGAAAGGGTGAGGCAGAAAAATCGATCATTCACGCGGGGTTATACCGGGGTTATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGt                                                                                                           <  1:83327/150‑1 (MQ=255)
                                               cagcccattgtaggagcgggttcacccgcgaacaccggcaaagccggtgccacccatcgcgtctccttcttcgcagcctcacccgctccaccgacgggatgaGGGGTTATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAat                                                                                                       >  2:915605‑M1/103‑150 (MQ=255)
                                                  ggcCGGTCAAGCTGGCTGCAGTCGAAGTGGTGACTTCGTCGCTACTGTCGGGAGGAAAGGGTGAGGCAGAAAAATCGATCATTCACGCGGGGTTATACCGGGGTTATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAatata                                                                                                    <  2:1427587/150‑1 (MQ=255)
                                                   gcCGGTCAAGCTGGCTGCAGTCGAAGTGGTGACTTCGTCGCTACTGTCGGGAGGAAAGGGTGAGGCAGAAAAATCGATCATTCACGCGGGGTTATACCGGGGTTATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAatatat                                                                                                   <  2:632670/150‑1 (MQ=255)
                                                     cGGTCAAGCTGGCTGCAGTCGAAGTGGTGACTTCGTCGCTACTGTCGGGAGGAAAGGGTGAGGCAGAAAAATCGATCATTCACGCGGGGTTATACCGGGGTTATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGa                                                                                                 <  1:2015712/150‑1 (MQ=255)
                                                            gagcgggttcacccgcgaacaccggcaacgccggagccaactctcgcgactccttcttcgcagcctcacccgctccaccgacgggatgaGGGGTTATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTaaaa                                                                                          >  1:1907630‑M1/90‑150 (MQ=255)
                                                            gagcgggttcacccgcgaacaccggcaaagccggtgccacccatcgcgtctccttcttcgcagcctcacccgctccaccgacgggatgaGGGGTTATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTaaaa                                                                                          <  1:1075867‑M1/61‑1 (MQ=255)
                                                            gagcgggttcacccgcgaacaccggcaaagccggtgccacccatcgcgtctccttcttcgcagcctcacccgctccaccgacgggatgaGGGGTTATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTaaaa                                                                                          >  1:1318575‑M1/90‑150 (MQ=255)
                                                              gcgggttcacccgcgaacaccggcaaacccggtgccacccatcgcgtctccttcttcgcagcctcacccgctccaccgacgggatgaGGGGTTATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAgg                                                                                        >  1:474389‑M1/88‑150 (MQ=255)
                                                                gctgCAGTCGAAGTGGTGACTTCGTCGCTACTGTCGGGAGGAAAGGGTGAGGCAGAAAAATCGATCATTCACGCGGGGTTATACCGGGGTTATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGtt                                                                                      >  2:354119/1‑150 (MQ=255)
                                                                  tacAGTCGAAGTGGTGACTTCGTCGCTACTGTCGGGAGGAAAGGGTGAGGCAGAAAAATCGATCATTCACGCGGGGTTATACCGGGGTTATGCCGAGATAAGGCAAAAATTAGGACATTCGt                                                                                                                <  2:67213/120‑1 (MQ=255)
                                                                     aGTCGAAGTGGTGACTTCGTCGCTACTGTCGGGAGGAAAGGGTGAGGCAGAAAAATCGATCATTCACGCGGGGTTATACCGGGGTTATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCg                                                                                 >  1:1948582/1‑150 (MQ=255)
                                                                        ccgcgaacaccggcaaagccggtgccacccatcgcgtctccttcttcgcagcctcacccgctccaccgacggggcgaGGGGTTATGCCGAGATAACGCCAACATTTCGCCATTCGTTCTTTAAAGATATGATTTAAAATGTTATTCgaga                                                                              <  2:257179‑M1/73‑1 (MQ=255)
                                                                        ccgcgaacaccggcaaagccggtgccacccatcgcgtctccttcttcgcagcctcacccgctccaccgacgggatgaGGGGTTATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCgaga                                                                              >  1:835178‑M1/78‑150 (MQ=255)
                                                                         gAAGTGGTGACTTCGTCGCTACTGTCGGGAGGAAAGGGTGAGGCAGAAAAATCGATCATTCACGCGGGGTTATACCGGGGTTATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTaaaa                                                                                          <  2:2105881/137‑1 (MQ=255)
                                                                         gAAGTGGTGACTTCGTCGCTACTGTCGGGAGGAAAGGGTGAGGCAGAAAAATCGATCATTCACGCGGGGTTATACCGGGGTTATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTaaaa                                                                                          >  1:2105881/1‑137 (MQ=255)
                                                                             tggtgACTTCGTCGCTACTGTCGGGAGGAAAGGGTGAGGCAGAAAAATCGATCATTCACGCGGGGTTATACCGGGGTTATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCg                                                                         >  1:241834/1‑150 (MQ=255)
                                                                              ggtgACTTCGTCGCTACTGTCGGGAGGAAAGGGTGAGGCAGAAAAATCGATCATTCACGCGGGGTTATACCGGGGTTATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGt                                                                        <  2:241834/150‑1 (MQ=255)
                                                                              ggtgACTTCGTCGCTACTGTCGGGAGGAAAGGGTGAGGCAGAAAAATCGATCATTCACGCGGGGTTATACCGGGGTTATGCCCAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGt                                                                        >  2:1996042/1‑150 (MQ=255)
                                                                               gtgACTTCGTCGCTACTGTCGGGAGGAAAGGGTGAGGCAGAAAAATCGATCATTCACGCGGGGTTATACCGGGGTTATGCCGAGATAAGGCaaaaa                                                                                                                             <  1:723186/96‑1 (MQ=255)
                                                                               gtgACTTCGTCGCTACTGTCGGGAGGAAAGGGTGAGGCAGAAAAATCGATCATTCACGCGGGGTTATACCGGGGTTATGCCGAGATAAGGCaaaaa                                                                                                                             >  2:723186/1‑96 (MQ=255)
                                                                               gtgACTTCGTCGCTACTGTCGGGAGGAAAGGGTGAGGCAGAAAAATCGATCATTCACGCGGGGTTATACCGGGGTTATGCCGAGATAAGGCAAAAAt                                                                                                                            >  2:1107837/1‑97 (MQ=255)
                                                                               gtgACTTCGTCGCTACTGTCGGGAGGAAAGGGTGAGGCAGAAAAATCGATCATTCACGCGGGGTTATACCGGGGTTATGCCGAGATAAGGCAAAAAt                                                                                                                            <  1:1107837/97‑1 (MQ=255)
                                                                               gtgACTTCGTCGCTACTGTCGGGAGGAAAGGGTGAGGCAGAAAAATCGATCATTCACGCGGGGTTATACCGGGGTTATGCCGAGATAAGGCAAAAATTAg                                                                                                                         <  1:2037841/100‑1 (MQ=255)
                                                                               gtgACTTCGTCGCTACTGTCGGGAGGAAAGGGTGAGGCAGAAAAATCGATCATTCACGCGGGGTTATACCGGGGTTATGCCGAGATAAGGCAAAAATTAg                                                                                                                         >  2:2037841/1‑100 (MQ=255)
                                                                               gtgACTTCGTCGCTACTGTCGGAAGGACAGGGTGAGGCAGAAAAATCGATCACTCACGCGGGGTTAGACCGGGGGTATGCCGAGATAAGGCAAAAATTAGGAGAACAGTTCTGTAAATATATGATAGAAAAGGTTATACGAGACGCCGTg                                                                       >  2:350174/1‑150 (MQ=255)
                                                                                    ttCGTCGCTACTGTCGGGAGGAAAGGGTGAGGCAGAAAAATCGATCATTCACGCGGGGTTATACCGGGGTTATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTg                                                                  >  1:2327841/1‑150 (MQ=255)
                                                                                     tcgtcgCTACTGTCGGGAGGAAAGGGTGAGGCAGAAAAATCGATCATTCACGCGGGGTTATACCGGGGTTATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGc                                                                 <  1:354119/150‑1 (MQ=255)
                                                                                       gtcgCTACTGTCGGGAGGAAAGGGTGAGGCAGAAAAATCGATCATTCACGCGGGGTTATACCGGGGTTATGCCTAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTg                                                               <  1:1996042/150‑1 (MQ=255)
                                                                                       gtcgCTACTGTCGGGAGGAAAGGGTGAGGCAGAAAAATCGATCATTCACGCGGGGTTATACCGGGGTTATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAACAAGTTCTTCGAGAGGTCGTGGCTTGCTg                                                               <  2:273530/150‑1 (MQ=255)
                                                                                       gtcgCTACTGTCGGGAGGAAAGGGTGAGGCAGAAAAATCGATCATTCACGCGGGGTTATACCGGGGTTATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTg                                                               <  2:327958/150‑1 (MQ=255)
                                                                                       gtcgCTACTGTCGGGAGGAAAGGGTGAGGCAGAAAAATCGATCATTCACGCGGGGTTATACCGGGGTTATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTg                                                               >  1:327958/1‑150 (MQ=255)
                                                                                        tcgCTACTGTCGGGAGGAAAGGGTGAGGCAGAAAAATCGATCATTCACGCGGGGTTATACCGGGGTTATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTgg                                                              <  1:350174/150‑1 (MQ=255)
                                                                                               tGTCGGGAGGAAAGGGTGAGGCAGAAAGATCGATCATTCACGCGGGGTTATACCGGGGTTATGc                                                                                                                                             >  1:62384/1‑64 (MQ=255)
                                                                                                ccacccatcgcgtttccttcttcacagcctcacccgatccaccgacgggatgaGGGTTTATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCAc                                                      >  2:1131581‑M1/54‑150 (MQ=255)
                                                                                                 tCGGGAGGAAAGGGTGAGGCAGAAAAATCGATCATTCACGCGGGGTTATACCGGGGTTATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCAcc                                                     <  1:1692710/150‑1 (MQ=255)
                                                                                                       tcgcgtctccttcttcgcagcctcacccgctccaccgacgggatgaGGGGTTATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTgg                                               >  2:1075867‑M1/47‑150 (MQ=255)
                                                                                                        gaAAGGGTGAGGCAGAAAAATCGATCATTCACGCGGGGTTATACCGGGGTTATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCt                                                                                                             <  1:2310709/87‑1 (MQ=255)
                                                                                                        gaAAGGGTGAGGCAGAAAAATCGATCATTCACGCGGGGTTATACCGGGGTTATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCt                                                                                                             >  2:2310709/1‑87 (MQ=255)
                                                                                                        gaAAGGGTGAGGAAGAAAAATCGATCATTCACGCGGGGTTATACCGGGGTTATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGc                                              <  2:1861981/150‑1 (MQ=255)
                                                                                                          aaGGGTGAGGCAGAAAAATCGATCATTCACGCGGGGTTATACCGGGGTTATGCCTAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTa                                            >  2:481077/1‑150 (MQ=255)
                                                                                                          aaGGGTGAGGCAGAAAAATCGATCATTCACGCGGGGTTATACCGGGGTTATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTa                                            <  1:2198973/150‑1 (MQ=255)
                                                                                                              tccttcttcgcagcctcacccgctccaccgacgggatgaGGGGTTATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCg                                        <  1:1435993‑M1/111‑1 (MQ=255)
                                                                                                              gTGAGGCAGAAAAATCGATCATTCACGCGGGGTTATACCGGGGTTATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCg                                        >  2:347620/1‑150 (MQ=255)
                                                                                                               ccttcttcgcagcctcacccgctccaccgacgggatgaGGGGTTATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGt                                       >  2:1435993‑M1/39‑150 (MQ=255)
                                                                                                                 ttcttcgcagcctcacccgctccaccgacgggatgaGGGGTTATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCt                                     <  2:615816‑M1/114‑1 (MQ=255)
                                                                                                                     aGAAAAATCGATCATTCACGCGGGGTTATACCGGGGTTATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGt                                       <  2:1753724/144‑1 (MQ=255)
                                                                                                                     aGAAAAATCGATCATTCACGCGGGGTTATACCGGGGTTATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGt                                       >  1:1753724/1‑144 (MQ=255)
                                                                                                                     aGAAAAATCGATCATTCACGCGGGGTTATACCGGGGTTATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGc                                 >  2:296156/1‑150 (MQ=255)
                                                                                                                         tatctgATCATTCACGCGGGGTTATACCGGGGTTATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGAt                             <  2:1452669/145‑1 (MQ=255)
                                                                                                                         aaaTCGATCATTCACGCGGGGTTATACCGGGGTTATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGAt                             <  2:2228408/150‑1 (MQ=255)
                                                                                                                           aTCGATCATTCACGCGGGGTTATACCGGGGTTATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGc                           >  1:1372718/1‑150 (MQ=255)
                                                                                                                              gATCATTCACGCGGGGTTATACCGGGGTTATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCttt                        >  2:1458196/1‑150 (MQ=255)
                                                                                                                               aTCATTCACGCGGGGTTATACCGGGGTTATGCCGAGATAAGGCCACAACTAGAACATAGCTACGGTAGACTGGTGGTTAGATAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATgagatc                       >  1:1452669/1‑145 (MQ=255)
                                                                                                                               aTCATTCACGCGGGGTTATACCGGGGTTATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCtttt                       <  2:1372718/150‑1 (MQ=255)
                                                                                                                                cccgctccaccgacgggatgaGGGGTTATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTg                      <  2:1477644‑M1/129‑1 (MQ=255)
                                                                                                                                   ttCACGCGGGGTTATACCGGGGTTATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAgg                                                                            <  2:783468/93‑1 (MQ=255)
                                                                                                                                   ttCACGCGGGGTTATACCGGGGTTATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAgg                                                                            >  1:783468/1‑93 (MQ=255)
                                                                                                                                          ggggTTATACCGGGGTTATTCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTgg            <  2:1886818/150‑1 (MQ=255)
                                                                                                                                            ggTTATACCGGGGTTATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTc                  <  1:2268022/142‑1 (MQ=255)
                                                                                                                                               tataCCGGGGTTATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGAt       <  2:1948582/150‑1 (MQ=255)
                                                                                                                                                    cGGGGTTATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGATGTGtt  <  2:2104810/150‑1 (MQ=255)
                                                                                                                                                     GGGGTTATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTaaaa                                                                                          <  2:728501‑M1/61‑1 (MQ=255)
                                                                                                                                                     GGGGTTATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTaaaa                                                                                          >  1:728501‑M1/1‑61 (MQ=255)
                                                                                                                                                     |                                                                                                                                                    
CATGAAAGTCGTTCCTTGACGTGAGGGGCTTTGTTCCAGGCGGTGCCGGCGGCCGGTCAAGCTGGCTGCAGTCGAAGTGGTGACTTCGTCGCTACTGTCGGGAGGAAAGGGTGAGGCAGAAAAATCGATCATTCACGCGGGGTTATACCGGGGTTATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGATGTGTT  >  NC_002947/3366447‑3366744

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.