New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3366596 =	92 (1.040)	25 (0.290)	23/244	NT	25.6%	intergenic (+219/‑142)	PP_2962/PP_2964	alcohol dehydrogenase/transposase
	?	NC_002947	4970500 =	55 (0.630)					intergenic (‑213/+181)	fliC/PP_4379	flagellin/3‑oxoacyl‑ACP synthase

GAACCTTCGTAATGGTTATCGTCGGGTGCGCGGGTTGCTTGAGGGTTTTTTC‑AAAAAAAAAATACTGGCATGGGGCCAGCCCTGAGAAATCAAGGGGTTAAGGGCGGTTTATTGGCGTCAAAAACTGTTTGAACTGGGCTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCTGCGTTAGGCAGAAGCTTATTTTCGGCAGAAAAAAAAGCGCCGGGCGGTG  >  NC_002947/4970353‑4970649                                                                                                                                                     |                                                                                                                                                      gaACCTTCGTAATGGTTATCGTCGGGTGCGCGGGTTGCTTGAGGGTTTTTTC‑AAAAAAAAAATACTGGCATGGGGCCAGCCCTGAGAAATCGAGGGGTTAAGGGCGGTTTATTGGCGTCAAAAACTGTTTGAACTGGGCTGAATGCCTCa                                                                                                                                                     <  1:1481772/150‑1 (MQ=255)   aCCTTCGTAATGGTTATCGTCGGGTGCGCGGGTTGCTTGAGGGTTTTTTC‑AAAAAAAAAATACTGGCATGGGGCCAGCCCTGAGAAATCAAGGGGTTAAGGGCGGTTTATTGGCGTCAAAAACTGTTTGAACTGGGCTGAATGCCTCATc                                                                                                                                                   <  1:984225/150‑1 (MQ=255)                    cgtcgGGTGCGCGGGTTGCTTGAGGGTTTTTTC‑AAAAAAAAAATACTGGCATGGGGCCAGCCCTGAGAAATCAAGGGGTTAAGGGCGGTTTATTGGCGTCAAAAACTGTTTGAACTGGGCTGAATGCCTCATCCCGTCGGTGGAGCGGGt                                                                                                                                  <  2:1321480/150‑1 (MQ=255)                    caaaagcatcagcatagacggctagccagacggtggatgaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccTCATCCCGTCGGTGGAGCggg                                                                                                                                   <  2:1477644‑M2/21‑1 (MQ=255)                      tcgGGTGCGCGGGTTGCTTGAGGGTTTTTTC‑AAAAAAAAAATACTGGCATGGGGCCAGCCCTGAGAAATCAAGGGGTTAAGGGCGGTTTATTGGCGTCAAAAACTGTTTGAACTGGAGTGAATGCCTCATCCCGTCTGGTGAGCGGGTGa                                                                                                                                >  2:881362/1‑150 (MQ=255)                      gcgGGTGCGCGGGTTGCTTGAGGGTTTTTTC‑AAAAAAAAAATACTGGCATGGGGCCAGCCCTGAGAAATCAAGGGGTTAAGGGCGGTTTATTGGCGTCAAAAACTGTTTGAACTGGGCTGAATGCCTCATCCCGTCGGTGGAGCGGGTGa                                                                                                                                <  1:383028/149‑1 (MQ=255)                               cgGGTTGCTTGAGGGTTTTTTC‑AAAAAAAAAATACTGGCATGGGGCCAGCCCTGAGAAATCAAGGGGTTAAGGGCGGTTTATTGGCGTCAAAAACTGTTTGAACTGGGCTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCgaa                                                                                                                       <  2:744345/150‑1 (MQ=255)                                  gTTGATTGAGGGTTTTTTA‑AAAAAAAAAATACTGGCATGGGGCCAGCCCTGAGAAATCAAGGGGTTAAGGGCGGTTTATTGGCGTCAAAAACTGTTTGAACTGGGCTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCgaagaa                                                                                                                    <  2:928608/150‑1 (MQ=255)                                   agacggctagccagacggtggatgaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccTCATCCCGTCGGTGGAGCGGGTGAGGCTGCgaagaa                                                                                                                    <  2:615816‑M2/36‑1 (MQ=255)                                     acggctagccagacggtggatgaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAgg                                                                                                                  >  2:1435993‑M2/113‑150 (MQ=255)                                      cggctagccagacggtggatgaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGga                                                                                                                 <  1:1435993‑M2/39‑1 (MQ=255)                                       ttGAGGGTTTTTTC‑AAAAAAAAAATACTGGCATGGGGCCAGCCCTGTGAAATCAGGGGGATAAGGGCGGATTATTGGCGTCAACAACTTTTTGCAGTGGGCTGGATGCCGCTTCCCGTCGGGGGAGGGGGTGGGGCTGCGAAGAAGgaga                                                                                                               >  1:383375/1‑150 (MQ=255)                                            ggTTTTTTC‑AAAAAAAAAATACTGGCATGGGGCCAGCCCTGAGAAATCAAGGGGTTAAGGGCGGTTTATTGGCGTCAAAAACTGTTTGAACTGGGCTGAATGCCTCATCCCGTCGGTGGAGCggg                                                                                                                                   <  1:1962880/125‑1 (MQ=255)                                            ggTTTTTTC‑AAAAAAAAAATACTGGCATGGGGCCAGCCCTGAGAAATCAAGGGGTTAAGGGCGGTTTATTGGCGTCAAAAACTGTTTGAACTGGGCTGAATGCCTCATCCCGTCGGTGGAGCggg                                                                                                                                   >  2:1962880/1‑125 (MQ=255)                                             ccagacggtggatgaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGa                                                                                                          >  2:1075867‑M2/105‑150 (MQ=255)                                             ccagacggtggatgaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGa                                                                                                          <  2:1468029‑M2/46‑1 (MQ=255)                                              ttttttCAAAAAAAAAAATACTGGCATGGGGCCAGCCCTGAGAAATCAAGGGGTTAAGGGCGGTTTATTGGCGTCAAAAACTGTTTGAACTGGGCTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGAt                                                                                                         <  1:1794738/150‑1 (MQ=255)                                                tgaac‑AAAAAAAAAATACTGGCATGGGGCCAGCCCTCAGAAACCAAGGGGTTAAGGGCGGTTTATTGGCGTCAAAAACTGTTTGAACTGGGCTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATggg                                                                                                      <  2:383375/146‑1 (MQ=255)                                                    gtggatgaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaacccTCATCCCGTCGGTGGATCGGGTGAGGCTGTGAAGAAGGAAACGCGATGGGTgg                                                                                                   >  2:1131581‑M2/98‑150 (MQ=255)                                                      aaaaaaaaaaTACTGGCATGGGGCCAGCCCTGAGAAATCAAGGGGTTAAGGGCGGGTTATTGGCGGCAAAAACTGTTTGAACTGGGCTGAATGCCTCATCCCGTCGGTGGAGCGGGAGAGGCTGCGCAGAAGGAGACGCGATGGGTGGcc                                                                                                 >  2:604970/1‑149 (MQ=255)                                                       aaaaaaaaaTACTGGCATGGGGCCAGCCCTGAGAAATCAAGGGGTTAAGGGCGGTTTATTGGCGTCAAAAACTGTTTGAACTGGGCTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCAc                                                                                                >  1:2321304/1‑150 (MQ=255)                                                            aaaaTACTGGCATGGGGCCAGCCCTGAGAAATCAAGGGGTTAAGGGCGGTTTATTGGCGTCAAAAACTGTTTGAACTGGGCTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCt                                                                                           <  1:881362/150‑1 (MQ=255)                                                              aaTACTGGCATGGGGCCAGCCCTGAGAAATCAAGGGGTTAAGGGCGGTTTATTGGCGTCAAAAACTGTTTGAACTGGGCTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCttt                                                                                         <  1:667153/150‑1 (MQ=255)                                                               aTACTGGCATGGGGCCAGCCCTGAGAAATCAAGGGGTTAAGGGCGGTTTATTGGCGTCAAAAACTGTTTGAACTGGGCTGAATGCCTCATCggggtcatgccgagataaggcaaaaattaggacattcgttctgtaagctattgtattta                                                                                        <  1:1018919‑M2/150‑60 (MQ=255)                                                                   tGGAATGGGGCCAGCCCTGAGAAATCAAGGGGTTAAGGGCGGTTTATTGGCGTCAAAAACTGTTTGAACTGGGCTGAATGCCTCATCggggtcatgccgagataaggcaaaaattaggacattcgttctctaagctattgtatttaaacg                                                                                    <  2:2262360‑M2/150‑64 (MQ=255)                                                                   tGGAATGGGGCCAGCCCTGAGAAATCAAGGGGATAAGGGCGGTTTATTGGCGTCAAAAACTGTTTGAACTGGGCTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGCAGGAGACGCGATGGGTGGCACAGGATTTGCCgg                                                                                    >  2:1645104/1‑150 (MQ=255)                                                                     gCATGGGGCCAGCCCTGAGAAATCAAGGGGTTAAGGGCGGTTTATTGGCGTCAAAAACTGTTTGAACTGGGCTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGgt                                                                                   <  2:1098658/149‑1 (MQ=255)                                                                     gCATGGGGCCAGCCCTGAGAAATCAAGGGGTTAAGGGCGGTTTATTGGCGTCAAAAACTGTTTGAACTGGGCTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGgt                                                                                   >  1:1098658/1‑149 (MQ=255)                                                                       aTGGGGCCAGCCCTGAGAAATCAAGGGGTTAAGGGCGGTTTATTGGCGTCAAAAACTGTTTGAACTGGGCTGAATGCCTCATCggggtcatgccgagataaggcaaaaattag                                                                                                                     >  2:436691‑M2/1‑83 (MQ=255)                                                                       aTGGGGCCAGCCCTGAGAAATCAAGGGGTTAAGGGCGGTTTATTGGCGTCAAAAACTGTTTGAACTGGGCTGAATGCCTCATCggggtcatgccgagataaggcaaaaattag                                                                                                                     <  1:436691‑M2/113‑31 (MQ=255)                                                                            tctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCgg                                                                           >  1:835178‑M2/74‑150 (MQ=255)                                                                            tctcgaataacattttaaatcatatctttaaagaacgaatggcgaaatgttggcgttatctcggcataaccccTCGCCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCgg                                                                           <  2:257179‑M2/77‑1 (MQ=255)                                                                            gCCAGCCCTGAGAAATCAAGGGGTTAAGGGCGGTTTATTGGCGTCAAAAACTGTTTGAACTGGGCTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCgg                                                                           >  1:309021/1‑150 (MQ=255)                                                                             ccAGCCCTGAGAAATCAAGGGGATAAGGGCGGCATAATGGCGTCAAAAACTGTTTGAACTGGGCTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCggg                                                                          >  2:1168873/1‑150 (MQ=255)                                                                                gCCCTGAGAAATCAAGGGGTTAAGGGCGGTTTATTGGCGTCAAAAACTGTTTGAACTGGGCTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGa                                                                       >  1:2173770/1‑150 (MQ=255)                                                                                   cTGAGAAATCAAGGGGTTAAGGGCGGTTTATTGGCGTCAAAAACTGTTTGAACTGGGCTGAATGCCTCATCggggtcatgccgagataaggcaaaaattaggacattcgttctctaagctattgtatttaaacgagtaga                                                                              <  2:568880‑M2/140‑70 (MQ=255)                                                                                   cTGAGAAATCAAGGGGTTAAGGGCGGTTTATTGGCGTCAAAAACTGTTTGAACTGGGCTGAATGCCTCATCggggtcatgccgagataaggcaaaaattaggacattcgttctctaagctattgtatttaaacgagtaga                                                                              >  1:568880‑M2/1‑71 (MQ=255)                                                                                    tGAGAAATCAAGGGGTTAAGGGCGGTTTATTGGCGTCAAAAACTGTTTGAACTGGGCTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCgg                                                                           <  1:1351207/142‑1 (MQ=255)                                                                                    tGAGAAATCAAGGGGTTAAGGGCGGTTTATTGGCGTCAAAAACTGTTTGAACTGGGCTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCgg                                                                           >  1:1558932/1‑142 (MQ=255)                                                                                    tGAGAAATCAAGGGGTTAAGGGCGGTTTATTGGCGTCAAAAACTGTTTGAACTGGGCTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCgg                                                                           >  2:1351207/1‑142 (MQ=255)                                                                                    tGAGAAATCAAGGGGTTAAGGGCGGTTTATTGGCGTCAAAAACTGTTTGAACTGGGCTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCgg                                                                           <  2:1558932/142‑1 (MQ=255)                                                                                    tGAGAAATCAAGGGGTTAAGGGCGGTTTATTGGCGTCAAAAACTGTTTGAACTGGGCTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCTGGTGAAccc                                                                   >  1:1485418/1‑150 (MQ=255)                                                                                    tGAGAAATCAAGGGGTTAAGGGCGGTTTATTGGCGTCAAAAACTGTTTGAACTGGGCTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAAccc                                                                   >  2:380781/1‑150 (MQ=255)                                                                                    tGAGAAATCAAGGGGTTAAGGGCGGTTTATTGGCGTCAAAAACTGTTTGAACTGGGCTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAAccc                                                                   <  1:1513566/150‑1 (MQ=255)                                                                                      ccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGGTTTGCCGGTGTTCGCGGGTGAACCCGc                                                                 >  1:474389‑M2/64‑150 (MQ=255)                                                                                        ttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGTCGCGAGAGTTGGCTCCGGCGTTGCCGGTGTTCGCGGGTGAACCCGCTc                                                               >  1:1907630‑M2/62‑150 (MQ=255)                                                                                        ttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTc                                                               <  1:1075867‑M2/89‑1 (MQ=255)                                                                                        ttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTc                                                               >  1:1318575‑M2/62‑150 (MQ=255)                                                                                            cAAGGGGTTAAGGGCGGTTTATTGGCGTCAAAAACTGTTTGAACTGGGCTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTAc                                                           >  1:35597/1‑150 (MQ=255)                                                                                             aaGGGGTTAAGGGCGGTTTATTGGCGTCAAAAACTGTTTGAACTGGGCTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACa                                                          >  1:354416/1‑150 (MQ=255)                                                                                               ggggTTAAGGGCGGTTTATTGGCGTCAAAAACTGTTTGAACTGGGCTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAAt                                                        >  1:332471/1‑150 (MQ=255)                                                                                                gggTTAAGGGCGGTTTATTGGCGTCAAAAACTGTTTGAACTGGGCTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATg                                                       <  2:2184449/150‑1 (MQ=255)                                                                                                 ggTTAAGGGCGGTTTATTGGCGTCAAAAACTGTTTGAACTGGGCTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGACGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATgg                                                      <  2:1677925/150‑1 (MQ=255)                                                                                                 atatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGgag                                                                                                                >  1:985671‑M2/53‑92 (MQ=255)                                                                                                 atatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGgag                                                                                                                <  2:985671‑M2/40‑1 (MQ=255)                                                                                                   ttAAGGGCGGTTTATTGGCGTCAAAAACTGTTTGAACTGGGCTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGc                                                    >  2:1458724/1‑150 (MQ=255)                                                                                                     atttacagaacgaatgtcctaatttttgccttatctcggcataaccccTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCTg                                                  >  2:915605‑M2/49‑150 (MQ=255)                                                                                                      tttacagaacgaatgtcctaatttttgccttatctcggcataaccccTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCTGc                                                 >  1:447571‑M2/48‑150 (MQ=255)                                                                                                      aGGGCGGTTTATTGGCGTCAAAAACTGTTTGAACTGGGCTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCTGc                                                 >  1:86751/1‑150 (MQ=255)                                                                                                          cagaacgaatgtcctaatttttgccttatctcggcataaccccTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCTGCGTTa                                             <  2:1584422‑M2/107‑1 (MQ=255)                                                                                                              ttATTGGCGTCCAAACCTGTTTGAACTGGGCTGAATGCCTCATCCCGTCGGTGGAGCGGGTGCGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCTGCGTTAGGCa                                         <  2:528956/150‑1 (MQ=255)                                                                                                              acgaatgtcctaatttttgccttatctcggcataaccccTCATCCCGTCGGTGGAGCGCGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACCATGGGCTGCGTTAGgcc                                         >  2:657918‑M2/40‑149 (MQ=255)                                                                                                               tATTGGCGTCAAAAACTGTTTGAACTGGGCTGAATGCCTCATCggggtcatgccgagataaggcaaaaattaggacattcgttctctaagctattgtatttaaacgagtagattagaagccctgatcagcaaagactgcttcgcgcccaa                                        >  2:2262301‑M2/1‑43 (MQ=255)                                                                                                                gaatgtcctaatttttgccttatctcggcataaccccTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCTGCGTTAGGCAGa                                       >  1:1979905‑M2/38‑150 (MQ=255)                                                                                                                 ttGGCGTCAAAAACTGTTTGAACTGGGCTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCg                                                                                     <  1:1246512/103‑1 (MQ=255)                                                                                                                 ttGGCGTCAAAAACTGTTTGAACTGGGCTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCg                                                                                     <  1:1246207/103‑1 (MQ=255)                                                                                                                 ttGGCGTCAAAAACTGTTTGAACTGGGCTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCg                                                                                     >  2:1246512/1‑103 (MQ=255)                                                                                                                 ttGGCGTCAAAAACTGTTTGAACTGGGCTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCg                                                                                     >  2:1246207/1‑103 (MQ=255)                                                                                                                    gCGTCAAAAACTGTTTGAACTGGGCTGAATGCCTCATCCCGTCGGTGGAGAGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCTGCGTTAGGCAGAAGCt                                   >  1:1949955/1‑150 (MQ=255)                                                                                                                      gTCAAAAACTGTTTGAACTGGGCTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGAGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGTTGATCCCGCCCCTACAATGGGCTGCGTTAGGCAGAAGCTTa                                 <  2:851988/150‑1 (MQ=255)                                                                                                                       tCAAAAACTGTTTGAACTGGGCTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCt                                                             <  2:1305141/121‑1 (MQ=255)                                                                                                                       tCAAAAACTGTTTGAACTGGGCTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCt                                                             >  1:1305141/1‑121 (MQ=255)                                                                                                                       tCAAAAACTGTTTGAACTGGGCTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCTGCGTTAGGCAGAAGCTTAt                                <  1:1645104/150‑1 (MQ=255)                                                                                                                         aatttttgccttatctcggcataaccccTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCTGCGTTAGGCAGAAGCTTAttt                              <  1:915605‑M2/122‑1 (MQ=255)                                                                                                                         aaaaaCTGTTTGAACTGGGCTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCTGCGTTAGGCAGAAGCTTAttt                              >  1:1203557/1‑150 (MQ=255)                                                                                                                          aaaaCTGTTTGAACTGGGCTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCTGCGTTAGGCAGAAg                                     >  1:111911/1‑142 (MQ=255)                                                                                                                          aaaaCTGTTTGAACTGGGCTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCTGCGTTAGGCAGAAg                                     <  2:111911/142‑1 (MQ=255)                                                                                                                           aaaCTGTTTGAACTGGGCTGAATGCCTCATCCCGTCGGTGGAg                                                                                                                                       <  2:1616386/43‑1 (MQ=255)                                                                                                                           aaaCTGTTTGAACTGGGCTGAATGCCTCATCCCGTCGGTGGAg                                                                                                                                       >  1:1616386/1‑43 (MQ=255)                                                                                                                            aaCTGTTTGAACTGGGCTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCTGCGTTAGGCAGAAGCTTATTTTCg                           <  2:86751/150‑1 (MQ=255)                                                                                                                                 ccttatctcggcataaccccTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCTGCGTTAGGCagaagcttttttttctgccg                      <  2:835178‑M2/130‑8 (MQ=255)                                                                                                                                  ttGAACTGGGCTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCTGCGTTAGGCAGAAGCTTATTTTCGGCAGaa                     <  2:309021/150‑1 (MQ=255)                                                                                                                                  cttatctcggcataaccccTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCTGCGTTAGGCAGAAGCTTATTTTCGGCAGaa                     <  2:1318575‑M2/131‑1 (MQ=255)                                                                                                                                    tatctcggcataaccccTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCTGCGTTAGGCAGAAGCTTATTTTCGGCAGaaaa                   <  2:1291995‑M2/133‑1 (MQ=255)                                                                                                                                      aCTGGGCTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCggg                                                                          <  1:130811/93‑1 (MQ=255)                                                                                                                                      aCTGGGCTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCggg                                                                          >  2:130811/1‑93 (MQ=255)                                                                                                                                        tgtggtgaatgCCGCATCggggtcacaccgagataatgcaaaaattaggaaattctttttctaagctattgtatttaaacgagtagattagaagccctgctcagcaaagactgcttcgcgcccaatcgcttcagccatccattgaggaag               >  2:1018919‑M2/6‑18 (MQ=255)                                                                                                                                          ggcataaccccTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGAGGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCTGCGTTAGCCAGAAGCTTGTTTTCGGTAGAAAAAAAAgc             >  1:260461‑M2/12‑150 (MQ=255)                                                                                                                                          ggCTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCTGCGTTAGGCAGAAGCTTATTTTCGGCAGAAAAAAAAgc             >  1:937049/1‑150 (MQ=255)                                                                                                                                          ggCTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCTGCGTTAGGCAGAAGCTTATTTTCGGCAGAAAAAAAAgc             >  2:953880/1‑150 (MQ=255)                                                                                                                                                    cTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCTGCGTTAGGCAGAAGGTAATGGGCGGCAGAAAAAAAAGCGCCGGGCGGt   >  1:591405‑M2/2‑150 (MQ=255)                                                                                                                                                    cTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCTGCGTTAGGCAGAAGCTTATTTTCGGCAGAAAAAAAAGCGCCGGGCGGt   >  2:698414‑M2/2‑150 (MQ=255)                                                                                                                                                    cTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCTGCGTTAGGCAGAAGCTTATTTTCGGCAGAAAAAAAAGCGCCGGGCGGt   >  2:1657608‑M2/2‑150 (MQ=255)                                                                                                                                                     tCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAAc                                                                     <  1:1188268/83‑1 (MQ=255)                                                                                                                                                     tCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAAc                                                                     >  2:1188268/1‑83 (MQ=255)                                                                                                                                                     tCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCTGCGTTAGGCAGAAGCTTATTTTCGGCAGAAAAAAAAGCGCCGGGCg     <  1:1209099/147‑1 (MQ=255)                                                                                                                                                     tCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCTGCGTTAGGCAGAAGCTTATTTTCGGCAGAAAAAAAAGCGCCGGGCg     >  2:1209099/1‑147 (MQ=255)                                                                                                                                                     tCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCTGCGTTAGGCAGAAGCTTATTTTCGGCAGAAAAAAAAGCGCCGGGCGGTg  <  1:953880/150‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                      GAACCTTCGTAATGGTTATCGTCGGGTGCGCGGGTTGCTTGAGGGTTTTTTC‑AAAAAAAAAATACTGGCATGGGGCCAGCCCTGAGAAATCAAGGGGTTAAGGGCGGTTTATTGGCGTCAAAAACTGTTTGAACTGGGCTGAATGCCTCATCCCGTCGGTGGAGCGGGTGAGGCTGCGAAGAAGGAGACGCGATGGGTGGCACCGGCTTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAATGGGCTGCGTTAGGCAGAAGCTTATTTTCGGCAGAAAAAAAAGCGCCGGGCGGTG  >  NC_002947/4970353‑4970649

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.