New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4186980 =	59 (0.670)	4 (0.050)	3/234	NT	6.9%	coding (283/1242 nt)	PP_3683	hypothetical protein
	?	NC_002947	4187004 =	52 (0.620)					coding (307/1242 nt)	PP_3683	hypothetical protein

CCTGCAGTGGAAGTCGCCAGCTTTGGATGTGATGCCGGTGGCAGGTAAGCAGCATTTCGCAGTCATGTTCGACACGATGCTTGAGCAAGGGCTTGTCAATTTCTTGGAGAAAGTGCATTCCCACGGTGGTTTGCCAGCAGTAAAGCTGGTGG‑C‑TGCGCACGACCACCAGATCCTCGTTTTCGTGGACAGTCAGGTTGCTAGCTCCGCGGTGCCGCTCCTTGAGTCAGCTTGGACGCAAGCCATCCAGTCGGACGGCAATCATGCCTGGACGGTCAATTTTGCTAGTGTGGACGAG  >  NC_002947/4186835‑4187129                                                                                                                                                  |                                                                                                                                                        ctgaacgacctgagcgaagctcgtccacactagcaaaattgaccgtccaggcatgattgccgtccgactggatggcttgcgtccaagctgactcaaggagcggcaccgcggagctagcaacctgactgtccacgaaaacgaggatCtggt                                                                                                                                                     >  2:976593‑M1/146‑150 (MQ=255) ctgaacgacctgagcgaagctcgtccacactagcaaaattgaccgtccaggcatgattgccgtccgactggatggcttgcgtccaagctgactcaaggagcggcaccgcggagctagcaacctgactgtccacgaaaacgaggatCtggt                                                                                                                                                     >  1:1401523‑M1/146‑150 (MQ=255) cctgcAGTGGAAGTCGCCAGCTTTGGATGTGATGCCGGTGGCAGGTAAGCAGCATTTCGCAGTCATGTTCGACACGATGCTTGAGCAAGGGCTTGTCAATTTCTTGGAGAAAGTGCATTCCCACGGTGGTTTGCCAGCAGTAAAGCtggt                                                                                                                                                     <  1:1157352/150‑1 (MQ=255)  tgaacgacctgagcgaagctcgtccacactagcaaaattgaccgtccaggcatgattgccgtccgactggatggcttgcgtccaagctgactcaaggagcggcaccgcggcgctagcaacctgactgtccacgaaaacgaggatCtggtg                                                                                                                                                    <  1:252243‑M1/6‑1 (MQ=255)  tgaacgacctcagcgaagctcgtccacactagcaaaattgaccgtccaggcatgattgccgtccgactggatggcttgcgtccaagctgactcaaggagcggcaccgcggagctagcaacctgactgtccacgaaaacgaggatCtggtg                                                                                                                                                    >  1:1357243‑M1/145‑150 (MQ=255)  ctgcAGTGGAAGTCGCCAGCTTTGGATGTGATGCCGGTGGCAGGTAAGCAGCATTTCGCAGTCATGTTCGACACGATGCTTGAGCAAGGGCTTGTCAATTTCTTGGAGAAAGTGCATTCCCACGGTGGTTTGCCAGCAGTAAAGCtg                                                                                                                                                       <  2:1506814/147‑1 (MQ=255)  ctgcAGTGGAAGTCGCCAGCTTTGGATGTGATGCCGGTGGCAGGTAAGCAGCATTTCGCAGTCATGTTCGACACGATGCTTGAGCAAGGGCTTGTCAATTTCTTGGAGAAAGTGCATTCCCACGGTGGTTTGCCAGCAGTAAAGCtg                                                                                                                                                       >  1:1506814/1‑147 (MQ=255)   tgcAGTGGAAGTCGCCAGCTTTGGATGTGATGCCGGTGGCAGGTAAGCAGCATTTCGCAGTCATGTTCGACACGATGCTTGAGCAAGGGCTTGTCAATTTCTTGGAGAAAGTGCATTCCCACGGTGGTTTGCCAGCAGTAAAGCtggtgg                                                                                                                                                   >  1:812435/1‑150 (MQ=255)       gTGGAAGTCGCCAGCTTTGGATGTGATGCCGGTGGTAGGTAAGCAGCATTTCGCAGTCATGTTCGACACGATGCTTGAGCAAGGGCTTGTCAATTTCTTGGAGAAAGTGCATTCCCACGGTGGTTTGCCAGCAGTAAAGCTGGTGG‑C‑Tgc                                                                                                                                             <  2:1251500/150‑1 (MQ=255)                gCCAGCTTTGGATGTGATGCCGGTGGCAGGTAAGCAGCATTTCACAGTCAGGTTCGACACGATGCTTGAGCTACGCCATATCGGAAGAGCAGAGGTATGGCATTCCCACGGTGGTTTGCCAGCAGTAAAGCTGGTGG‑C‑TGCGGACGacca                                                                                                                                    >  1:531096/1‑150 (MQ=255)                 ccAGCTTTGGATGTGATGCCGGTGGCAGGTAAGCAGCATTTCGCAGTCATGTTCGACACGATGCTTGAGCAAGGGCTTGTCAATTTCTTGGAGAAAGTGCATTCCCACGGTGGTTTGCCAGCAGTAAAGCTGGTGG‑C‑TGCGCACGaccac                                                                                                                                   >  2:295240/1‑150 (MQ=255)                 ccAGCTTTGGATGTGATGCCGGTGGCAGGTAAGCAGCATTTCGCAGTCATGTTCGACACGATGCTTGAGCAAGGGCTTGTCAATTTCTTGGAGAAAGTGCATTCCCACGGTGGTTTGCCAGCAGTAAAGCTGGTGG‑C‑TGCGCACGaccac                                                                                                                                   >  1:2321753/1‑150 (MQ=255)                    tcTTTGGATGTGATGCCGGTGGCAGGTAAGCAGCATTTCGCAGTCATGTTCGACACGATGCTTGAGCAAGGGCTTGTCAATTTCTTGGAGAAAGTGCATTCCCACGGTGGTTTGCCAGCAGTAAAGCTGGTGG‑C‑TGCGCACGACCACCAg                                                                                                                                >  2:433031/2‑150 (MQ=255)                        tGGATGTGATGCCGGTGGCAGGTAAGCAGCATTTCGCAGTCATGTTCGACACGATGCTTGAGCAAGGGCTTGTCAATTTCTTGGAGAAAGTGCATTCCCACGGTGGTTTGCCAGCAGTAAAGCTGGTGG‑C‑TGCGCACGACCACCAGATcc                                                                                                                            >  2:1274137/1‑150 (MQ=255)                        tGGATGTGATGCCGGTGGCAGGTAAGCAGCATTTCGCAGTCATGTTCGACACGATGCTTGAGCAAGGGCTTGTCAATTTCTTGGAGAAAGTGCATTCCCACGGTGGTTTGCCAGCAGTAAAGCTGGTGG‑C‑TGCGCACGACCACCAGATcc                                                                                                                            <  1:547920/150‑1 (MQ=255)                           aTGTGATGCCGGTGGCAGGTAAGCAGCATTTCGCAGTCATGTTCGACACGATGCTTGAGCAAGGGCTTGTCAATTTCTTGGAGAAAGTGCATTCCCACGGGGGTTTGCCAGCAGTAAAGCTGGTGG‑C‑TGCGCACGACCACCAGATCCTCg                                                                                                                         <  2:2321753/150‑1 (MQ=255)                            tgtgATGCCGGTGGCAGGTAAGCAGCATTTCGCAGTCATGTTCGACACGATGCTTGAGCAAGGGCTTGTCAATTTCTTGGAGAAAGTGCATTCCCACGGTGGTTTGCCAGCAGTAAAGCTGGTGG‑C‑TGCGCACGACCACCAGATCCTCGt                                                                                                                        >  2:1639635/1‑150 (MQ=255)                                aTGCCGGTGGCAGGTAAGCAGCATTTCGCAGTCATGTTCGACACGATGCTTGAGCAAGGGCTTGTCAATTTCTTGGAGAAAGTGCATTCCCACGGTGGTTTGCCAGCAGTAAAGCTGGTGG‑C‑TGCGCa                                                                                                                                          >  1:2104137/1‑128 (MQ=255)                                aTGCCGGTGGCAGGTAAGCAGCATTTCGCAGTCATGTTCGACACGATGCTTGAGCAAGGGCTTGTCAATTTCTTGGAGAAAGTGCATTCCCACGGTGGTTTGCCAGCAGTAAAGCTGGTGG‑C‑TGCGCa                                                                                                                                          <  2:2104137/128‑1 (MQ=255)                                aTGCCGGTGGCAGGTAAGCAGCATTTCGCAGTCATGTTCGACACGATGCTTGAGCAAGGGCTTGTCAATTTCTTGGAGAAAGTGCATTCCCACGGTGGTTTGCCAGCAGTAAAGCTGGTGG‑C‑TGCGCACGACCACCAGATCCTCGTTTTc                                                                                                                    <  1:295240/150‑1 (MQ=255)                                   ccGGTGGCAGGTAAGCAGCATTTCGCAGTCATGTTCGACACGATGCTTGAGCAAGGGCTTGTCAATTTCTTGGAGAAAGTGCATTCCCACGGTGGTTTGCCAGCAGTAAAGCTGGTGG‑C‑TGCGCACGACCACCAGATCCTCGTTTTCGTg                                                                                                                 <  2:2214294/150‑1 (MQ=255)                                   ccGGTGGCAGGTAAGCAGCATTTCGCAGTCATGTTCGACACGATGCTTGAGCAAGGGCTTGTCAATTTCTTGGAGAAAGTGCATTCCCACGGTGGTTTGCCAGCAGTAAAGCTGGTGG‑C‑TGCGCACGACCACCAGATCCTCGTTTTCGTg                                                                                                                 <  2:1045963/150‑1 (MQ=255)                                   ccGGTGGCAGGTAAGCAGCATTTCGCAGTCATGTTCGACACGATGCTTGAGCAAGGGCTTGTCAATTTCTTGGAGAAAGTGCATTCCCACGGTGGTTTGCCAGCAGTAAAGCTGGTGG‑C‑TGCGCACGACCACCAGATCCTCGTTTTCGTg                                                                                                                 <  2:1909011/150‑1 (MQ=255)                                          accgtccaggcatgattgccgtccgactggatggcttgcgtccaagctgactcaaggagcggcaccgcggagctagcaacctgactgtccacgaaaacgaggatCtggtgg                                                                                                                                                   >  1:1747309‑M1/105‑111 (MQ=255)                                          accgtccaggcatgattgccgtccgactggatggcttgcgtccaagctgactcaaggagcggcaccgcggagctagcaacctgactgtccacgaaaacgaggatCtggtgg                                                                                                                                                   <  2:1747309‑M1/7‑1 (MQ=255)                                           aGGTAAGTAGTATTTCGCAGTCATGTTTGACACGATGCTTGAGCAAGGGCTTGTCAATTTCTTGGAGAAAGTGCATTCCCACGGTGGTTTGCCAGCAGTAAAGCTGGTGT‑C‑TGCGCACGACCACCAGATCCTCGTTTTCGTGGACAGTCa                                                                                                         <  1:2230470/150‑1 (MQ=255)                                           aGGTAAGCAGCATTTCGCAGTCATGTTCGACACGATGCTTGAGCAAGGGCTTGTCAATTTCTTGGAGAAAGTGCATTCCCACGGTGGTTTGCCAGCAGTAAAGCTGGTGG‑C‑Tgc                                                                                                                                             <  2:690036/114‑1 (MQ=255)                                           aGGTAAGCAGCATTTCGCAGTCATGTTCGACACGATGCTTGAGCAAGGGCTTGTCAATTTCTTGGAGAAAGTGCATTCCCACGGTGGTTTGCCAGCAGTAAAGCTGGTGG‑C‑Tgc                                                                                                                                             >  1:690036/1‑114 (MQ=255)                                            ggTAAGCAGCATTTCGCAGTCATGTTCGACACGATGCTTGAGCAAGGGCTTGTCAATTTCTTGGAGAAAGTGCATTCCCACGGTGGTTTGCCAGCAGTAAAGCTGGTGG‑C‑TGCGCACGACCACCAGATCCTCGTTTTCGTGGACAGTCAg                                                                                                        >  2:2180842/1‑150 (MQ=255)                                             gTAAGCAGCATTTCGCAGTCATGTTCGACACGATGCTTGAGCAAGGGCTTGTCAATTTCTTGGAGAAAGTGCATTCCCACGGTGGTTTGCCAGCAGTAAAGCTGGTGG‑C‑TGCGCACGACCACCAGATCCTCGTTTTCGTGGACAGTCAgg                                                                                                       <  2:155141/150‑1 (MQ=255)                                                  cagcaTTTCGCAGTCATGTTCGACACGATGCTTGAGCAAGGGCTTGTCAATTTCTTGGAGAAAGTGCATTCCCACGGTGGTTTGCCAGCAGTAAAGCTGGTGG‑C‑TGCGCACGACCACCAGATCCTCGTTTTCGTGGACAGTCAGGTTGCt                                                                                                  >  2:1619624/1‑150 (MQ=255)                                                   agcaTTTCGCAGTCATGTTCGACACGATGCTTGAGCAAGGGCTTGTCAATTTCTTGGAGAAAGTGCATTCCCACGGTGGTTTGCCAGCAGTAAAGCTGGTGG‑C‑TGCGCACGACCACCAGATCCTCGTTTTCGTGGACAGTCAGGTTGCTa                                                                                                 <  1:1619624/150‑1 (MQ=255)                                                       tttCGCAGTCATGTTCGACACGATGCTTGAGCAAGGGCTTGTCAATTTCTTGGAGAAAGTGCATTCCCACGGTGGTTTGCCAGCAGTAAAGCTGGTGG‑C‑TGCGCACGACCACCAGATCATCGTTTTCGTGGACAGTCAGGTTGCTAGCTc                                                                                             >  2:1593775/1‑150 (MQ=255)                                                            cAGTCATGTTCGACACGATGCTTGAGCAAGGGCTTGTCAATTTCTTGGAGAAAGTGCATTCCCACGGTGGTTTGCCAGCAGTAAAGCTGGTGG‑C‑TGCGCACGACCACCAGATCCTCGTTTTCGTGGACAGTCAGGTTGCTAGCTCCGCgg                                                                                        <  1:1274137/150‑1 (MQ=255)                                                              gTCATGTTCGACACGATGCTTGAGCAAGGGCTTGTCAATTTCTTGGAGAAAGTGCATTCCCACGGTGGTTTGCCAGCAGTAAAGCTGGTGG‑C‑TGCGCACGACCACCAGATCCTCGTTTTCGTGGACAGTCAGGTTGCTAGCTCCGCGGTg                                                                                      >  2:100790/1‑150 (MQ=255)                                                               tCATGTTCGACACGATGCTTGAGCAAGGGCTTGTCAATTTCTTGGAGAAAGTGCATTCCCACGGTGGTTTGCCAGCAGTAAAGCTGGTGG‑C‑TGCGCACGACCACCAGATCCTCGTTTTCGTGGACAGTCAGGTTGCTAGCTCCGCGGTGc                                                                                     <  1:2083481/150‑1 (MQ=255)                                                                 aTGTTCGACACGATGCTTGAGCAAGGGCTTGTCAATTTCTTGGAGAAAGTGCATTCCCACGGTGGTTTGCCAGCAGTAAAGCTGGTGG‑C‑TGCGCACGACCACCAGATCCTCGTTTTCGTGGCCAGTCAGGTTGCTAGCTCCGCGGTGCCg                                                                                   >  2:189966/1‑150 (MQ=255)                                                                  atctCGACACGATGCTTGAGCAAGGGCTTGTCAATTTCTTGGAGAAAGTGCATTCCCACGGTGGTTTGCCAGCAGTAAAGCTGGTGG‑C‑TGCGCACGACCACCAGATCCTCGTTTTCGTGGACAGTCAGGTTGCTAGCTCCGCGGTGCCGc                                                                                  <  1:1666789/147‑1 (MQ=255)                                                                       gACACGATGCTTGAGCAAGGGCTTGTCAATTTCTTGGAGAAAGTGCATTCCCACGGTGGTTTGCCAGCAGTAAAGCTGGTGG‑C‑TGCGCACGACCACCAGATCCTCGTTTTCGTGGACAGTCCGGATGCTATCGCCGCGGAGCCGCtagaa                                                                             >  2:1666789/1‑146 (MQ=255)                                                                        acacGATGCTTGAGCAAGGGCTTGTCAATTTCTTGGAGAAAGTGCATTCCCACGGTGGTTTGCCAGCAGTAAAGCTGGTGG‑C‑TGCGCACGACCACCAGATCCTCGTTTTCg                                                                                                                   >  1:826489/1‑111 (MQ=255)                                                                        acacGATGCTTGAGCAAGGGCTTGTCAATTTCTTGGAGAAAGTGCATTCCCACGGTGGTTTGCCAGCAGTAAAGCTGGTGG‑C‑TGCGCACGACCACCAGATCCTCGTTTTCg                                                                                                                   <  2:826489/111‑1 (MQ=255)                                                                          acGATGCTTGAGCAAGGGCTTGTCAATTTCTTGGAGAAAGTGCATTCCCACGGTGGTTTGCCAGCAGTAAAGCTGGTGG‑C‑TGCGCACGACCACCAGATCCTCGTTTTCGTGGACAGTCAGGTTGCTAGCTCCGCGGTGCCGCTCCTTGAg                                                                          >  2:252243/1‑150 (MQ=255)                                                                            gATGCTTGAGCAAGGGCTTGTCAATTTATTGGAGAAAGTGCATTCCCACGGTGGTTTGCCAGCAGTAAAGCTGGTGG‑C‑TGCGCACGACCACCAGATCCTCGTTTTCGTGGACAGTCAGGTTGCTAGCTCCGCGGTGCCGCTCCTTGAGTc                                                                        >  2:1250211/1‑150 (MQ=255)                                                                               gCTTGAGCAAGGGCTTGTCAATTTCTTGGAGAAAGTGCATTCCCACGGTGGTTTGCCAGCAGTAAAGCTGGTGG‑C‑TGCGCACGACCACCAGATCCTCGTTTTCGTGGACAGTCAGGTTGCTAGCTCCGCGGTGCCGCTCCTTGAGTCAGc                                                                     <  1:170036/150‑1 (MQ=255)                                                                               gCTTGAGCAAGGGCTTGTCAATTTCTTGGAGAAAGTGCATTCCCACGGTGGTTTGCCAGCAGTAAAGCTGGTGG‑C‑TGCGCACGACCACCAGATCCTCGTTTTCGTGGACAGTCAGGTTGCTAGCTCCGCGGTGCCGCTCCTTGAGTCAGc                                                                     >  1:1743263/1‑150 (MQ=255)                                                                                cTTGAGCAAGGGCTTGTCAATTTCTTGGAGAAAGTGCATTCCCACGGTGGTTTGCCAGCAGTAAAGCTGGTGG‑C‑TGCGCACGACCACCAGATCCTCGTTTTCGTGGACAGTCAGGTTGCTAGCTCCGCGGTGCCGCTCCTTGAGTCAGCt                                                                    >  2:110973/1‑150 (MQ=255)                                                                                    aGCAAGGGCTTGTCAATTTCTTGGAGAAAGTGCATTCCCACGGTGGTTTGCCAGCAGTAAAGCTGGTGG‑C‑TGCGCACGACCACCAGATCCTCGTTTTCGTGGACAGTCAGGTTGCTAGCTCCGCGGTGCCGCTCCTTGAGTCAGCTTGGa                                                                >  1:585504/1‑150 (MQ=255)                                                                                      cAAGGGCTTGTCAATTTCTTGGAGAAAGTGCATTCCCACGGTGGTTTGCCAGCAGTAAAGCTGGTGG‑C‑TGCGCACGACCACCAGATcc                                                                                                                            >  2:246741/1‑88 (MQ=255)                                                                                      cAAGGGCTTGTCAATTTCTTGGAGAAAGTGCATTCCCACGGTGGTTTGCCAGCAGTAAAGCTGGTGG‑C‑TGCGCACGACCACCAGATcc                                                                                                                            <  1:246741/88‑1 (MQ=255)                                                                                             ttGTCAATTTCTTGGAGAAAGTGCATTCCCACGGTGGTTTGCCAGCAGTAAAGCTGGTGG‑C‑TGCGCACGACCACCAGATCCTCGTTTTCGTGGACAGTCAGGTTGCTAGCTCCGCGGTGCCGCTCCTTGAGTCAGCTTGGACGCAAGCCa                                                       >  2:545102/1‑150 (MQ=255)                                                                                              taaggagcggcaccgcggagctagcaacctgactgtccacgaaaacgaggatCTGGTGG‑C‑TGCGCACGACCACCAGAt                                                                                                                              >  1:771386‑M1/53‑78 (MQ=255)                                                                                              taaggagcggcaccgcggagctagcaacctgactgtccacgaaaacgaggatCTGGTGG‑C‑TGCGCACGACCACCAGAt                                                                                                                              <  2:771386‑M1/26‑1 (MQ=255)                                                                                               gTCAATTTCTTGGAGAAAGTGCATTCCCACGGTGGTTTGCCAGCAGTAAAGCTGGTGG‑C‑TGCGCACGACCACCAGATCCTCGTTTTCGTGGACAGTCAGGTTGCTAGCTCCGCGGTGCCGCTCCTTGAGTCAGCTTGGACGCAAGCCATc                                                     <  1:492562/150‑1 (MQ=255)                                                                                               gTCAATTTCTTGGAGAAAGTGCATTCCCACGGTGGTTTGCCAGCAGTAAAGCTGGTGG‑C‑TGCGCACGACCACCAGATCCTCGTTTTCGTGGACAGTCAGGTTGCTAGCTCCGCGGTGCCGCTCCTTGAGTCAGCTTGGACGCAAGCCATc                                                     <  2:812435/150‑1 (MQ=255)                                                                                                 cAATTTCTTGGAGAAAGTGCATTCCCACGGTGGTTTGCCAGCAGTAAAGCTGGTGG‑C‑TGCGCACGACCACCAGATCCTCGTTTTCGTGGACAGTCAGGTTGCTAGCTCCGCGGTGCCGCTCCTTGAGTCAGCTTGGACGCAAGCCATCCa                                                   <  2:585504/150‑1 (MQ=255)                                                                                                  aaTCTCTTGGAGAAAGTGCATTCCCACGGTGGTTTGACAGCAGTAAACCTGGAGG‑C‑TGCCAAAGCATAAAAAATCCTCGTTTTCGTGGACAGTTAGGTTGCTAGCTCCGCGGTGCCGCTCCTTGAGTCAGCTTGGACGCAAGCCATCCAg                                                  >  2:32295/1‑150 (MQ=255)                                                                                                   aTTTCTTGGAGAAAGTGCATTCCCACGGTGGTTTGCCAGCAGTAAAGCTGGTGG‑C‑TGCGCACGACCACCAGATCCTCGTTTTCGTGGACAGTCAGGTTGCTAGCTCCGCGGTGCCGCTCCTTGAGTCAGCTTGGACGCAAGCCATCCAGt                                                 <  1:1712612/150‑1 (MQ=255)                                                                                                   aTTTCTTGGAGAAAGTGCATTCCCACGGTGGTTTGCCAGCAGTAAAGCTGGTGG‑C‑TGCGCACGACCACCAGATCCTCGTTTTCGTGGACAGTCAGGTTGCTAGCTCCGCGGTGCCGCTCCTTGAGTCAGCTTGGACGCAAGCCATCCAGt                                                 <  1:1639635/150‑1 (MQ=255)                                                                                                               aaGTGCATTCCCACGGTGGTTTGCCAGCAGTAAAGCTGGTGG‑C‑TGCGCACGACCACCAGATCCTCGTTTTCGTGGACAGTCAGGTTGCTAGCTCCGCGGTGCCGCTCCTTGAGTCAGCTTGGACGCAAGCCATCCAGTCGGACGGCAATc                                     <  1:433031/150‑1 (MQ=255)                                                                                                                     aTTCCCACGGTGGTTTGCCAGCAGTAAAGCTGGTGG‑C‑TGCGCACGACCACCAGATCCTCGTTTTCGTGGACAGTCAGGTTGCTAGCTCCGCGGTGCCGCTCCTTGAGTCAGCTTGGACGCAAGCCATCCAGTCGGACGGCAATCATGCCt                               >  1:309030/1‑150 (MQ=255)                                                                                                                         ccACGGTGGTTTGCCAGCAGTAAAGCTGGTGG‑C‑TGCGCACGACCACCAGATCCTCGTTTTCGTGGACAGTCAGGTTGCTAGCTCCGCGGTGCCGCTCCTTGAGTCAGCTTGGACGCAAGCCATCCAGTCGGACGGCAATCATGCCTGGAc                           >  2:1867835/1‑150 (MQ=255)                                                                                                                               tgtccacgaaaacgaggatCTGGTGGTCGTGCGCA‑G‑CCACCAGATCCTCGTTTTCGTGGACAGTCAGGTTGCTAGCTCCGCGGTGCCGCTCCTTGAGTCAGCTTGGACGCAAGCCATCCAGTCGGACGGCAATCATGCCTGGACGGTc                       <  1:1166151‑M1/129‑1 (MQ=255)                                                                                                                               tgtccacgaaaacgaggatCTGGTGGTCGTGCGCA‑G‑CCACCAGATCCTCGTTTTCGTGGACAGTCAGGTTGCTAGCTCCGCGGTGCCGCTCCTTGAGTCAGCTTGGACGCAAGCCATCCAGTCGGACGGCAATCATGCCTGGACGGTc                       >  2:1166151‑M1/20‑148 (MQ=255)                                                                                                                                  tttGCCAGCAGTAAAGCTGGTGG‑C‑TGCGCACGACCACCAGATCCTCGTTTTCGTGGACAGTCAGGTTGCTAGCTCCGCGGTGCCGCTCCTTGAGTCAGCTTGGACGCAAGCCATCCAGTCGGACGGCAATCATGCCTGGACGGTCAAttt                  >  1:259014/1‑150 (MQ=255)                                                                                                                                   ttGCCAGCAGTAAAGCTGGTGG‑C‑TGCGCACGACCACCAGATCCTCGTTTTCGTGGACAGTCAGGTTGCTAGCTCCGCGGTGCCGCTCCTTGAGTCAGCTTGGACGCAAGCCATCCAGTCGGACGGCAATCATGCCTGGACGGTCAAtttt                 <  2:259014/150‑1 (MQ=255)                                                                                                                                    tGCCAGCAGTAAAGCTGGTGG‑C‑TGCGCACGACCACCAGATCCTCGTTTTCGTGGACAGTCAGGTTGCTAGCTCCGCGGTGCCGCTCCTTGAGTCAGCTTGGACGCAAGCCATCCAGTCGGACGGCAATCATGCCTGGACGGTCAATTTTg                <  1:1593775/150‑1 (MQ=255)                                                                                                                                      ccAGCAGTAAAGCTGGTGG‑C‑TGCGCACGACCACCAGATCCTCGTTTTCGTGGACAGTCAGGTTGCTAGCTCCGCGGTGCCGCTCCTTGAGTCAGCTTGGACGCAAGCCATCCAGTc                                                >  2:84574/1‑116 (MQ=255)                                                                                                                                      ccAGCAGTAAAGCTGGTGG‑C‑TGCGCACGACCACCAGATCCTCGTTTTCGTGGACAGTCAGGTTGCTAGCTCCGCGGTGCCGCTCCTTGAGTCAGCTTGGACGCAAGCCATCCAGTc                                                <  1:84574/116‑1 (MQ=255)                                                                                                                                      ccAGCAGTAAAGCTGGTGG‑C‑TGCGCACGACCACCAGATCCTCGTTTTCGTGGACAGTCAGGTTGCTAGCTCCGCGGTGCCGCTCCTTGAGTCAGCTTGGACGCAAGCCATCCAGTCGGACGGCAATCATGCCTGGACGGTCAATTTTGCt              >  1:1838148/1‑150 (MQ=255)                                                                                                                                      ccAGCAGTAAAGCTGGTGG‑C‑TGCGCACGACCACCAGATCCTCGTTTTCGTGGACAGTCAGGTTGCTAGCTCCGCGGTGCCGCTCCTTGAGTCAGCTTGGACGCAAGCCATCCAGTCGGACGGCAATCATGCCTGGACGGTCAATTTTGCt              >  1:1512564/1‑150 (MQ=255)                                                                                                                                        agcagTAAAGCTGGTGG‑C‑TGCGCACGACCACCAGATCCTCGTTTTCGTGGACAGTCAGGTTGCTAGCTCCGCGGTGCCGCTCCTTGAGTCAGCTTGGACGCAAGCCATCCAGTCGGACGGCAATCATGCCTGGACGGTCAATTTTGCTAg            >  1:28500/1‑150 (MQ=255)                                                                                                                                           agTAAAGCTGGTGG‑C‑TGCGCACGACCACCAGATCCTCGTTTTCGTGGACAGTCAGGTTGCTAGCTCCGCGGTGCCGCTCCTTGAGTCAGCTTGGACGCAAGCCATCCAGTCGGACGGCAATCATGCCTGGACGGTCAATTTTGCTAgtgt         <  1:2180842/150‑1 (MQ=255)                                                                                                                                             tAAAGCTGGTGG‑C‑TGCGCACGACCACCAGATCCTCGTTTTCGTGGACAGTCAGGTTGCTAGCTCCGCGGTGCCGCTCCtt                                                                             >  2:1906732/1‑80 (MQ=255)                                                                                                                                               aaGCTGGTGG‑C‑TGCGCACGACCACCAGATCCTCGTTTTCGTGGACAGTCAGGTTGCTAGCTCCGCGGTGCCGCTCCTTGAGTCAGCTTGGACGCAAGCCATCCAGTCGGACGGCAATCATGCCTGGACGGTCAATTTTGCTAGTGTGGAc     >  2:141198/1‑150 (MQ=255)                                                                                                                                               aaGCTGGTGG‑C‑TGCGCACGACCACCAGATCCTCGTTTTCGTGGACAGTCAGGTTGCTAGCTCCGCGGTGCCGCTCCTTGAGTCAGCTTGGACGCAAGCCATCCAGTCGGACGGCAATCATGCCTGGACGGTCAATTTTGCTAGTGTGGAc     >  2:1856304/1‑150 (MQ=255)                                                                                                                                                 gCTGGTGG‑C‑TGCGCACGACCACCAGATCCTCGTTTTCGTGGACAGTCAGGTTGCTAGCTCCGCGGTGCCGCTCCTTGAGTCAGCTTGGACGCAATCCATCCAGTCGGACGGCAATCATGCCTGGACGGTCAATTTTGCTAGTGTGGACGa   <  1:100790/150‑1 (MQ=255)                                                                                                                                                  CTGGTGG‑C‑TGCGCACGACCACCAGATCCTCGTTTTCGTGGACAGTCAGGTTGCTAGCTCCGCGGTGCCGCTCCTTGAGTCAGCTTGGACGCAAGCCATCCAGTCGGACGGCAATCATGCCTGGACGGTCAATTTTGCTAGTGTGGACGAg  >  2:1743263‑M1/1‑150 (MQ=255)                                                                                                                                                  |                                                                                                                                                        CCTGCAGTGGAAGTCGCCAGCTTTGGATGTGATGCCGGTGGCAGGTAAGCAGCATTTCGCAGTCATGTTCGACACGATGCTTGAGCAAGGGCTTGTCAATTTCTTGGAGAAAGTGCATTCCCACGGTGGTTTGCCAGCAGTAAAGCTGGTGG‑C‑TGCGCACGACCACCAGATCCTCGTTTTCGTGGACAGTCAGGTTGCTAGCTCCGCGGTGCCGCTCCTTGAGTCAGCTTGGACGCAAGCCATCCAGTCGGACGGCAATCATGCCTGGACGGTCAATTTTGCTAGTGTGGACGAG  >  NC_002947/4186835‑4187129

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.