New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5432804	54 (0.610)	4 (0.050)	4/238	NT	6.6%	coding (2508/2529 nt)	hrpB	ATP‑dependent helicase HrpB
	?	NC_002947	= 5432818	61 (0.720)					coding (2494/2529 nt)	hrpB	ATP‑dependent helicase HrpB

ATCACGTTCCTATTGAGGCAGGCAGATCGAGCTTCACTGGCCGGGGCAATACGATGAATGGCACGACCACTGACACGTCGTGGCCAGCGCATGATTTTTTCGGCCTGCCGCACTCGGTGGTGTGCATCAGCTCCCTCTCGGCTTGGCCCTGGCGGT‑AG‑CCTCGGCCACCAGAGGGTCGTCCGGCCAGTAGTGCTTCGGATATCGCCCTTTCAGGTCTTTCTTCACCTCGGCATAGGTCGTGCGCCAGAAACTGGCCAGGTCCTGGGTCACCTGCACCGGCCGACGCGCCGGTGACA  >  NC_002947/5432657‑5432952                                                                                                                                                    |                                                                                                                                                       aTCACGTTCCTATTGAGGCAGGCAGATCGAGCTTCACTGGCCGGGGCAATACGATGAATGGCACGACCACTGACACGTCGTGGCCAGCGCATGATTTTTTCGGCCTGCCGCACTCGGTGGTGTGCATCAGCTCCCTCTCGGCTTGGCCCt                                                                                                                                                      >  2:962178/1‑150 (MQ=255)  tCACGTTCCTATTGAGGCAGGCAGATCGAGCTTCACTGGCCGGGGCAATACGATGAATGGCACGACCACTGACACGTCGTGGCCAGCGCATGATTTTTTCGGCCTGCCGCACTCGGTGGTGTGCATCAGCTCCCTCTCGGCTTGGCCCTg                                                                                                                                                     <  1:446361/150‑1 (MQ=255)   cACGTTCCTATTGAGGCAGGCAGATCGAGCTTCACTGGCCGGGGCAATACGATGAATGGCACGACCACTGACACGTCGTGGCCAGCGCATGATTTTTTCGGCCTGCCGCACTCGGTGGTGTGCATCAGCTCCCTCTCGGCTTGGCCCTgg                                                                                                                                                    <  1:962178/150‑1 (MQ=255)    aggTTCCTATTGAGGCTGGCAGATCGAGCTTCACTGGCCGGGGTAATACGATGAATGGCATGACCACTGACACGTCGTGGCCAGCGCATGATTTTTTCGGCCTGCCGCCCTCGGTGGTGTGCATCAGCTCCCTCTCGGCTTGGCCCTGGc                                                                                                                                                   <  2:1994671/148‑1 (MQ=255)          ctgttGAGGCAGGCAGATCGAGCTTCACTGGCCGGGGCAATACGATGAATGGCACGACCACTGACACGTCGTGGCCAGCGCATGATTTTTTCGGCCTGCCGCACTCGGTGGTGTGCATCAGCTCCCTCTCGGCTTGGCCCTGGCGGT‑AG‑c                                                                                                                                           >  1:2329081/4‑150 (MQ=255)             ttGAGGCAGGCAGATCGAGCTTCACTGGCCGGGGCAATACGATGAATGGCACGACCACTGACACGTCGTGGCCAGCGCATGATTTTTTCGGCCTGCCGCACTCGGTGGTGTGCATCAGCTCCCTCTCGGCTTGGCCCTGGCGGT‑AG‑CCTc                                                                                                                                        <  2:1963004/150‑1 (MQ=255)             ttGAGGCAGGCAGATCGAGCTTCACTGGCCGGGGCAATACGATGAATGGCACGACCACTGACACGTCGTGGCCAGCGCATGATTTTTTCGGCCTGCCGCACTCGGTGGTGTGCATCAGCTCCCTCTCGGCTTGGCCCTGGCGGT‑AG‑CCTc                                                                                                                                        <  2:185140/150‑1 (MQ=255)                    aggcagATCGAGCTTCACTGGCCGGGGCAATACGATGAATGGCACGACCACTGACACGTCGTGGCCAGCGCATGATTTTTTCGGCCTGCCGCACTCGGTGGTGTGCATCAGCTCCCTCTCGGCTTGGCCCTGGCGGT‑AG‑CCTCGGccacc                                                                                                                                 >  2:2080775/1‑150 (MQ=255)                            cGAGCTTCACTGGCCGGGGCAATACGATGAATGGCACGACCACTGACACGTCGTGGCCAGCGCATGATTTTTTCGGCCTGCCGCACTCGGTGGTGTGCATCAGCTCCCTCTCGGCTTGGCCCTGGCGGT‑AG‑CCTCGGCCACCAGAGGgtc                                                                                                                         <  2:2329081/150‑1 (MQ=255)                               gCTTCACTGGCCGGGGCAATACGATGAATGGCACGACCACTGACACGTCGTGGCCAGCGCATGATTTTTTCGGCCTGCCGCACTCGGTGGTGTGCATCAGCTCCCTCTCGGCTTGGCCGAGGCTAC‑CG‑CCAGggccaagccgagagggag                                                                                                                      <  1:1172246‑M2/150‑19 (MQ=255)                                 ttCACTGGCCGGGGCAATACGATGAATGGCACGACCACTGACACGTCGTGGCCAGCGCATGATTTTTTCGGCCTGCCGCACTCGGTGGTGTGCATCAGCTCCCTCTCGGCTTGGCCCTGGCGGT‑AG‑CCTCGGCCACCAGAGGGTCGTCCg                                                                                                                    >  2:200244/1‑150 (MQ=255)                                   cACTGGCCGGGGCAATACGATGAATGGCACGACCACTGACACGTCGTGGCCAGCGCATGATTTTTTCGGCCTGCCGCACTCGGTGGTGTGCATCAGCTCCCTCTCGGCTTAGCCCTGGCGGT‑AG‑CCTCGGCCACCAGAGGGTCGTCCGGc                                                                                                                  >  1:965257/1‑150 (MQ=255)                                    aCTGGCCGGGGCAATACGATGAATGGCACGACCACTGACACGTCGTGGCCAGCGCATGATTTTTTCGGCCTGCCGCACTCGGTGGTGTGCATCAGCTCCCTCTCGGCTTGGCCGAGGCTAC‑CG‑CCAGggccaagccgagagggagctgat                                                                                                                 >  2:1172246‑M2/1‑127 (MQ=255)                                     cTGGCCGGGGCAATACGATGAATGGCACGACCACTGACACGTCGTGGCCAGCGCATGATTTTTTCGGCCTGCCGCACTCGGTGGTGTGCATCAGCTCCCTCTCGGCTTGGCCGAGGCTAC‑CG‑CCAGggccaagccgagagggagc                                                                                                                     >  2:192303‑M2/1‑126 (MQ=255)                                     cTGGCCGGGGCAATACGATGAATGGCACGACCACTGACACGTCGTGGCCAGCGCATGATTTTTTCGGCCTGCCGCACTCGGTGGTGTGCATCAGCTCCCTCTCGGCTTGGCCGAGGCTAC‑CG‑CCAGggccaagccgagagggagc                                                                                                                     <  1:192303‑M2/145‑20 (MQ=255)                                           ggggCAATACGATGAATGGCACGACCACTGACACGTCGTGGCCAGCGCATGATTTTTTCGGCCTGCCGCACTCGGTGGTGTGCATCAGCTCCCTCTCGGCTTGGCCCTGGCGGT‑AG‑CCTCGGCCACCAGAGGGTCGTCCGGCCAGTAGTg                                                                                                          >  2:1530044/1‑150 (MQ=255)                                                aaTACGATGAATGGCACGACCACTGACACGTCGTGGCCAGCGCATGATTTTTTCGGCCTGCCGCACTCGGTGGTGTGCATCAGCTCCCTCTCGGCTTGGCCCTGGCGGT‑AG‑CCTCGGCCACCAGAgg                                                                                                                            <  2:150501/127‑1 (MQ=255)                                                aaTACGATGAATGGCACGACCACTGACACGTCGTGGCCAGCGCATGATTTTTTCGGCCTGCCGCACTCGGTGGTGTGCATCAGCTCCCTCTCGGCTTGGCCCTGGCGGT‑AG‑CCTCGGCCACCAGAgg                                                                                                                            >  1:150501/1‑127 (MQ=255)                                                  tACGATGAATGGCACGACCACTGACACGTCGTGGTCCGGGCTTGAGTGTTTCGGCCTGCCGCACTCGGTGGTGTGCATCAGCTCCCTCTCGGCTTGGCCCTGGCGGT‑AG‑CCTCGGCCACCAGAGGGTCGTCCGGCCAGTAGTGCTTCGGa                                                                                                   <  2:819888/150‑1 (MQ=255)                                                          aTGGCACGACCACTGACACGTCGTGGCCAGCGCATGATTTTTTCGGCCTGCCGCACTCGGTGGTGTGCATCAGCTCCCTCTCGGCTTGGCCCTGGCGGT‑AG‑CCTCGGCCACCAGAGGGTCGTCCGGCCAGTAGTGCTTCGGATATCGccc                                                                                           >  1:302860/1‑150 (MQ=255)                                                             gCACGACCACTGACACGTCGTGGCCAGCGCATGATTTTTTCGGCCTGCCGCACTCGGTGGTGTGCATCAGCTCCCTCTCGGCTTGGCCCTGGCGGT‑AG‑CCTCGGCCACCAGAGGGTCGTCCGGCCAGTAGTGCTTCg                                                                                                     >  1:176913/1‑137 (MQ=255)                                                             gCACGACCACTGACACGTCGTGGCCAGCGCATGATTTTTTCGGCCTGCCGCACTCGGTGGTGTGCATCAGCTCCCTCTCGGCTTGGCCCTGGCGGT‑AG‑CCTCGGCCACCAGAGGGTCGTCCGGCCAGTAGTGCTTCg                                                                                                     <  2:176913/137‑1 (MQ=255)                                                               aCGACCACTGACACGTCGTGGCCAGCGCATGATTTTTTCGGCCTGCCGCACTCGGTGGTGTGCATCAGCTCCCTCTCGGCTTGGCCCTGGCGGT‑AG‑CCTCGGCCACCAGAGGGTCGTCCGGCCAGTAGTGCTTCGGATATCGCCCTTTCa                                                                                      <  2:1678711/150‑1 (MQ=255)                                                               aCGACCACTGACACGTCGTGGCCAGCGCATGATTTTTTCGGCCTGCCGCACTCGGTGGTGTACATCAGCTCCCTGCCGGC‑‑GATGCAGGCGTTGCGTGCTCGTCTACCAGAGGGTCGTCCGGCCAGTAGTGCTTCGGATATCGCCCTTTCa                                                                                      >  1:1694841/1‑150 (MQ=255)                                                                 gACCACTGACACGTCGTGGCCAGCGCATGATTTTTTCGGCCTGCCGCACTCGGTGGTGTGCATCAGCTCCCTCTCGGCTTGGCCCTGGCGGT‑AG‑CCTCGGCCACCAGAGGGTCGTCCGGCCAGTAGTGCTTCGGATATCGCCCTTTCAgg                                                                                    >  2:1445161/1‑150 (MQ=255)                                                                 gACCACTGACACGTCGTGGCCAGCGCATGATTTTTTCGGCCTGCCGCACTCGGTGGTGTGCATCAGCTCCCTCTCGGCTTGGCCCTGGCGGT‑AG‑CCTCGGCCACCAGAGGGTCGTCCGGCCAGTAGTGCTTCGGATATCGCCCTTTCAgg                                                                                    >  1:1900319/1‑150 (MQ=255)                                                                  agcACTGACACGGCGTGGCCAGCGCATGATTTTTTCGGCCTGCCGCACTCGGTGGTGTGCATCAGCTCCCTCTCGGCTTGTCCCTGGCGGT‑AG‑CCTCGGCCACCAGAGGGTCGTCCGGCCAGTAGTGCTTCGGATATCGCCCTTTCAGGt                                                                                   <  2:530193/148‑1 (MQ=255)                                                                    cACTGACACGTCGTGGCCAGCGCATGATTTTTTCGGCCTGCCGCACTCGGTGGTGTGCATCAGCTCCCTCTCGGCTTGGCCCTGGCGGT‑AG‑CCTCGGCCACCAGAGGGTCGTCCGGCCAGTAGTGCTTCGGATATCGCCCTTTCAGGtct                                                                                 >  2:1793879/1‑150 (MQ=255)                                                                         acacGTCGTGGCCAGCGCATGATTTTTTCGGCCTGCCGCACTCGGTGGTGTGCATCAGCTCCCTCTCGGCTTGGCCCTGGCGGT‑AG‑CCTCGGCCACCAGAGGGTCGTCCGGc                                                                                                                  <  1:1883344/112‑1 (MQ=255)                                                                         acacGTCGTGGCCAGCGCATGATTTTTTCGGCCTGCCGCACTCGGTGGTGTGCATCAGCTCCCTCTCGGCTTGGCCCTGGCGGT‑AG‑CCTCGGCCACCAGAGGGTCGTCCGGc                                                                                                                  >  2:1883344/1‑112 (MQ=255)                                                                         acacGTCGTGGCCAGCGCATGATTTTTTCGGCCTGCCGAACTCGGTGGTGTGCATCAGCTCCCTCTCGGCTTGGCCCTGGCGGT‑AG‑CCTCGGCCACCAGAGGGTCGTCCGGCCAGTAGTGCTTCGGATATCGCCCTTTCAGGtctttctt                                                                            >  2:1350821/1‑150 (MQ=255)                                                                             gtcgtGGCCAGCGCATGATTTTTTCGGCCTGCCGCACTCGGTGGTGTGCATCAGCTCCCTCTCGGCTTGGCCCTGGCGGT‑AG‑CCTCGGCCACCAGAGGGTCGTCCGGCCAGTAGTGCTTCGGATATCGCCCTTTAAGGTCGTTCTTTAcc                                                                        >  2:650613/1‑150 (MQ=255)                                                                                      aGCGCATGATTTTTTCGGCCTGCCGCACTCGGTGGTGTGCATCAGCTCACTTTCGGCTTGGCCCTGGCGGT‑AG‑CCTCGGCCACCAGAGGGTCGTCCGGCCAGTAGTGCTTCGGATATCGCCCTTTCAGGTCTTTCTTCACCTCGGCATAg                                                               <  1:512973/150‑1 (MQ=255)                                                                                         gcATGATTTTTTCGGCCTGCCGCACTCGGTGGTGTGCATCAGCTCCCTCTCGGCTTGGCCCTGGCGGT‑AG‑CCTCGGCCACCAGAGGGTCGTCCGGCCAGTAGTGCTTCGGATATCGCCCTTTCAGGTCTTTCTTCACCTCGGCATAGGTc                                                            <  1:266414/150‑1 (MQ=255)                                                                                           aTGATTTTTTCGGCCTGCCGCACTCGGTGGTGTGCATCAGCTCCCTCTCGGCTTGGCCCTgg                                                                                                                                                    <  1:684491/62‑1 (MQ=255)                                                                                           aTGATTTTTTCGGCCTGCCGCACTCGGTGGTGTGCATCAGCTCCCTCTCGGCTTGGCCCTgg                                                                                                                                                    >  2:684491/1‑62 (MQ=255)                                                                                           aTGATTTTTTCGGCCTGCCGCACTCGGTGGTGTGCATCAGCTCCCTCTCGGCTTGGCCCTGGCGGT‑AG‑CCTCGGCCACCAGAGGGTCGTCCGGCCAGTAGTGCTTCGGATATCGCCCTTTCAGGTCTTTCTTCACCTCGGCATAGGTCGt                                                          >  1:1825225/1‑150 (MQ=255)                                                                                            tGATTTTTTCGGCCTGCCGCACTCGGTGGTGTGCATCAGCTCCCTCTCGGCTTGGCCCTGGCGGT‑AG‑CCTCGGCCACCAGAGGGTCGTCCGGCCAGTAGTGCTTCGGATATACCCCTTTCAGGTCTTTCTTCACCTCGGCATAGGTCGTg                                                         >  1:14616/1‑150 (MQ=255)                                                                                             gATTTTTTCGGCCTGCCGCACTCGGTGGTGTGCATCAGCTCCCTCTCGGCTTGGCCCTGGCGGT‑AG‑CCTCGGCCACCAGAGGGTCGTCCGGCCAGTAGTGCTTCGGATATCGCCCTTTCAGGTCTTTCTTCACCTCGGCATAGGTCGTgc                                                        <  1:200244/150‑1 (MQ=255)                                                                                              aTTTTTTCGGCCTGCCGCACTCGGTGGTGTGCATCAGCTCCCTCTCGGCTTGGCCCTGGCGGT‑AG‑CCTCGGCCACCAGAGGGTCGTCCGGCCAGTAGTGCTTCGGATATCGCCCTTTCAGGTCTTTCTTCACCTCGGCATAGGTCGTgcg                                                       <  1:1530044/150‑1 (MQ=255)                                                                                               ttttttCCGCATGCCGAGCTGGGGGGTGTTCATCAGCTCGCTCTCGGCTTGGCCCTGGCGGT‑AG‑CCTCGGCCACCAGAGGGTCGTCCGGCCAGTAGTGCTTCGGATATCGCCCTTTTAGGTCTTTCTTCACCTCGGCATAGGTCGTgcgc                                                      >  2:513620/1‑150 (MQ=255)                                                                                                   ttCGGCCTGCCGCACTCGGTGGTGTGCATCAGCTCCCTCTCGGCTTGGCCCTGGCGGT‑AG‑CCTCGGCCACCAGAGGGTCGTCCGGCCAGTAGTGCTTCGGATATCGCCCTTTCAGGTCTTTCTTCACCTCGGCATAGGTCGTGCGCCAGa                                                  >  2:963916/1‑150 (MQ=255)                                                                                                         cTGCCGCACTCGGTGGTGTGCATCAGCTCCCTCTCGGCTTGGCCCTGGCGGT‑AG‑CCTCGGCCACCAGAGGGTCGTCCGGCCAGTAGTGCTTCGGATATCGCCCTTTCAGGTCTTTCTTCACCTCGGCATAGGTCGTGCGCCAGAAACTga                                            <  2:1603159/150‑2 (MQ=255)                                                                                                          tGCCGCACTCGGTGGTGTGCATCAGCTCCCTCTCGGCTTGGCCCTGGCGGT‑AG‑CCTCGGCCACCAGAGGGTCGTCCGGCCAGTAGTGCTTCGGATATCGCCCTTTCAGGTCTTTCTTCACCTCGGCATAGGTCGTGCGCCAGAAACTGGc                                           <  1:963916/150‑1 (MQ=255)                                                                                                            ccGCACTCGGTGGTGTGCATCAGCTCCCTCTCGGCTTGGCCCTGGCGGT‑AG‑CCTCGGCCACCAGAGGGTCGTCCGGCCAGTAGTGCTTCGGATATCGCCCTTTCAGGTCTTTCTTCACCTCGGCATAGGTCGTGCGCCAGAAACTGGCCa                                         >  1:244378/1‑150 (MQ=255)                                                                                                              gCACTCGGTGGTGTGCATCAGCTCCCTCTCGGCTTGGCCCTGGCGGT‑AG‑CCTCGGCCACCAGAGGGTCGTCCGGCCAGTAGTGCTTCGGATATCGCCCTTTCAGGTCTTTCTTCACCTCGGCATAGGTCGTGCGCCAGAAACTGGCCAgg                                       >  2:984254/1‑150 (MQ=255)                                                                                                               cACTCGGTGGTGTGCATCAGCTCCCTCTCGGCTTGGCCCTGGCGGT‑AG‑CCTCGGCCACCAGAGGGTCGTCCGGCCAGTAGTGCTTCGGATATCGCCCTTTc                                                                                       >  2:1343205/1‑101 (MQ=255)                                                                                                               cACTCGGTGGTGTGCATCAGCTCCCTCTCGGCTTGGCCCTGGCGGT‑AG‑CCTCGGCCACCAGAGGGTCGTCCGGCCAGTAGTGCTTCGGATATCGCCCTTTc                                                                                       <  1:1343205/101‑1 (MQ=255)                                                                                                                  tCGGTGGTGTGCATCAGCTCCCTCTCGGCTTGGCCCTGGCGGT‑AG‑CCTCGGCCACCAGAGGGTCGTCCGGCCAGTAGTGCTTCGGATATCGCCCttt                                                                                        <  1:1744701/97‑1 (MQ=255)                                                                                                                  tCGGTGGTGTGCATCAGCTCCCTCTCGGCTTGGCCCTGGCGGT‑AG‑CCTCGGCCACCAGAGGGTCGTCCGGCCAGTAGTGCTTCGGATATCGCCCttt                                                                                        >  2:1744701/1‑97 (MQ=255)                                                                                                                    ggtggtGTGCATCAGCTCCCTCTCGGCTTGGCCCTGGCGGT‑AG‑CCTCGGCCACCAGAGGGTCGTCCGGCCAGTAGTGCTTCGGATATCGCCCTTTCAGGTCTTTCTTCACCTCGGCATAGGTCGTGCGCCAGAAACTGGCCAGGTCCTgg                                 <  1:1793879/150‑1 (MQ=255)                                                                                                                              aTCAGCTCCCTCTCGGCTTGGCCctggcggtagcctcggccaagccgagagggagctgatgcacaccaccgagtgcggcaggccgaaaaaatcatgcgctggccacgacgtgtcagtggtcgtgccattcatcgtattgccccggccagt                         >  2:1172246‑M1/1‑23 (MQ=255)                                                                                                                               tCAGCTCCCTCTCGGCTTGGCCCTGGCGGT‑AG‑CCTCGGCCACCAGAGGGTCGTCCGGCCAGTAGTGCTTCGGATATCGCCCTTTCAGGTCTTTCTTCACCTCGGCATAGGTCGTGCGCCAGAAACTGGCCAGGTCCTGGGTCACCTGCAc                      <  1:1189039/150‑1 (MQ=255)                                                                                                                                cAGCTCCCTCTCGGCTTGGCCCTGGCGGT‑AG‑CCTCGGCCACCAGAGGGTCGTCCGGCCAGTAGTGCTTCGGATATCGCCCTTTCAGGtctttc                                                                              >  2:1862411/1‑93 (MQ=255)                                                                                                                                cAGCTCCCTCTCGGCTTGGCCCTGGCGGT‑AG‑CCTCGGCCACCAGAGGGTCGTCCGGCCAGTAGTGCTTCGGATATCGCCCTTTCAGGtctttc                                                                              <  1:1862411/93‑1 (MQ=255)                                                                                                                                  gCTCCCTCTCGGCTTGGCCctggcggtagcctcggccaagccgagagggagctgatgcacaccaccgagtgcggcaggccgaaaaaatcatgcgctggccacgacgtgtcagtggtcgtgccattcatcgtattgccccggccag                          >  2:192303‑M1/1‑19 (MQ=255)                                                                                                                                  gCTCCCTCTCGGCTTGGCCctggcggtagcctcggccaagccgagagggagctgatgcacaccaccgagtgcggcaggccgaaaaaatcatgcgctggccacgacgtgtcagtggtcgtgccattcatcgtattgccccggccag                          <  1:192303‑M1/145‑127 (MQ=255)                                                                                                                                  gCTCCCTCTCGGCTTGGCCCTGGCGGT‑AG‑CCTCGGCCACCAGAGGGTCGTCCGGCCAGTAGTGCTTCGGATATCGCCCTTTCAGGTCTTTCTTCACCTCGGCATAGGTCGTGCGCCAGAAACTGGCCAGGTCCt                                   <  2:1301260/134‑1 (MQ=255)                                                                                                                                  gCTCCCTCTCGGCTTGGCCCTGGCGGT‑AG‑CCTCGGCCACCAGAGGGTCGTCCGGCCAGTAGTGCTTCGGATATCGCCCTTTCAGGTCTTTCTTCACCTCGGCATAGGTCGTGCGCCAGAAACTGGCCAGGTCCt                                   >  1:1301260/1‑134 (MQ=255)                                                                                                                                   cTCCCTCTCGGCTTGGCCctggcggtagcctcggccaagccgagagggagctgatgcacaccaccgagtgcggcaggccgaaaaaatcatgcgctggccacgacgtgtcagtggtcgtgccattcatcgtattgccccggccagtgaagc                    <  1:1172246‑M1/150‑133 (MQ=255)                                                                                                                                   cTCCCTCTCGGCTTGGCCCTGGCGGT‑AG‑CCTCGGCCACCAGAGGGTCGTCCGGCCAGTAGTGCTTCGGATATCGCCCTTTCAGGTCTTTCTTCACCTCGGCATAGGTCGTGCGCCAGAAACTGGCCAGGTCCTGGGTCACCTGCACCGGc                  >  2:1743888/1‑150 (MQ=255)                                                                                                                                      ccTCTCGGCTTGGCCCTGGCGGT‑AG‑CCTCGGCCACCAGAGGGTCGTCCGGCCAGTAGTGCTTCGGATATCGCCCTTTCAGGTCTTTCTTCACCTCGGCATAGGTCGTGCGCCAGAAACTGGCCAGGTCCTg                                  >  2:2103607/1‑131 (MQ=255)                                                                                                                                      ccTCTCGGCTTGGCCCTGGCGGT‑AG‑CCTCGGCCACCAGAGGGTCGTCCGGCCAGTAGTGCTTCGGATATCGCCCTTTCAGGTCTTTCTTCACCTCGGCATAGGTCGTGCGCCAGAAACTGGCCAGGTCCTg                                  <  1:2103607/131‑1 (MQ=255)                                                                                                                                       ctctCGGCTTGGCCCTGGCGGT‑AG‑CCTCGGCCACCAGAGGGTCGTCCGGCCAGTAGTGCTTCGGATATCGCCCTTTCAGGTCTTTCTTCACCTCGGCATAGGTCGTGCGCCAGAAACTGGCCAGGTCCTGGGTCACCTGCACCGGCCGAc              <  1:1350821/150‑1 (MQ=255)                                                                                                                                        tctcGGCTTGGCCCTGGCGGT‑AG‑CCTCGGCCACCAGAGGGTCGTCCGGCCAGTAGTGCTTCGGATATCGCCCTTTCAGGTCTTTCTTCACCTCGGCATAGGTCGTGCGCCAGAAACTGGCCAGGTCCTGGGTCACCTGCACCGGCCGAcg             >  2:137810/1‑150 (MQ=255)                                                                                                                                          tcGGCTTGGCCCTGGCGGT‑AG‑CCTCGGCCACCAGAGGGTCGTCCGGCCAGTAGTGCTTCGGATATCGCCCTTTCAGGTCTTTCTTCACCTCGGCATAGGTCGTGCGCCAGAAACTGGCCAGGTCCTGGGTCACCTGCACCGGCCGAcgcg           >  2:1315122/1‑150 (MQ=255)                                                                                                                                            ggCTTGGCCCTGGCGGT‑AG‑CCTCGGCCACCAGAGGGTCGTCCGGCCag                                                                                                               <  2:721735/48‑1 (MQ=255)                                                                                                                                            ggCTTGGCCCTGGCGGT‑AG‑CCTCGGCCACCAGAGGGTCGTCCGGCCag                                                                                                               >  1:721735/1‑48 (MQ=255)                                                                                                                                                tGGCCCTGGCGGT‑AG‑CCTCGGCCACCAGAGGGTCGTCCGGCCAGTAGTGCTTCGGATATCGCCCTTTCAGGTCTTTCTTCACCTCGGCATAGGTCGTGCGCCAGAAACTGGCCAGGTCCTGGGTCACCTGCACCGGCCGACGCGCCGGTg     >  2:2204349/1‑150 (MQ=255)                                                                                                                                                  gCCCTGGCGGT‑AG‑CCTCGGCCACCAGAGGGTCGTCCGGCCAGTAGTGCTTCGGATATCGCCCTTTCAGGTCTTTCTTCACCTCGGCATAGGTCGTGCGCCAGAAACTGGCCAGGt                                      <  1:1223888/115‑1 (MQ=255)                                                                                                                                                  gCCCTGGCGGT‑AG‑CCTCGGCCACCAGAGGGTCGTCCGGCCAGTAGTGCTTCGGATATCGCCCTTTCAGGTCTTTCTTCACCTCGGCATAGGTCGTGCGCCAGAAACTGGCCAGGt                                      >  2:1223888/1‑115 (MQ=255)                                                                                                                                                   cccTGGCGGT‑AG‑CCTCGGCCACCAGAGGGTCGTCCGGCCAGTAGTGCTTCGGATATCGCCCTTTCAGGTCTTTCTTCACCTCGGCATAGGTCGTGCGCCAGAAACTGGCCAGGTCCTGGGTCACCTGCACCGGCCGACGCGCCGGTGAca  >  1:1283484/1‑150 (MQ=255)                                                                                                                                                   cccTGGCGGT‑AG‑CCTCGGCCACCAGAGGGTCGTCCGGCCAGTAGTGCTTCGGATATCGCCCTTTCAGGTCTTTCTTCACCTCGGCATAGGTCGTGCGCCAGAAACTGGCCAGGTCCTGGGTCACCTGCACCGACCGACGCGCCGGTGAcc  >  1:486252/1‑149 (MQ=255)                                                                                                                                                    ccTGGCGGT‑AG‑CCTCGGCCACCAGAGGGTCGTCCGGCCAGTAGTGCTTCGGATATCGCCCTTTCAGGTCTTTCTTCACCTCGGCATAGGTCGTGCGCCAGAAACTGGCCa                                         <  1:2065291/110‑1 (MQ=255)                                                                                                                                                    ccTGGCGGT‑AG‑CCTCGGCCACCAGAGGGTCGTCCGGCCAGTAGTGCTTCGGATATCGCCCTTTCAGGTCTTTCTTCACCTCGGCATAGGTCGTGCGCCAGAAACTGGCCa                                         >  2:2065291/1‑110 (MQ=255)                                                                                                                                                    |                                                                                                                                                       ATCACGTTCCTATTGAGGCAGGCAGATCGAGCTTCACTGGCCGGGGCAATACGATGAATGGCACGACCACTGACACGTCGTGGCCAGCGCATGATTTTTTCGGCCTGCCGCACTCGGTGGTGTGCATCAGCTCCCTCTCGGCTTGGCCCTGGCGGT‑AG‑CCTCGGCCACCAGAGGGTCGTCCGGCCAGTAGTGCTTCGGATATCGCCCTTTCAGGTCTTTCTTCACCTCGGCATAGGTCGTGCGCCAGAAACTGGCCAGGTCCTGGGTCACCTGCACCGGCCGACGCGCCGGTGACA  >  NC_002947/5432657‑5432952

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.