New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 615842090 (1.020)5 (0.060) 5/230 NT 5.4% intergenic (+86/‑21) PP_5401/PP_5739 hypothetical protein/hypothetical protein
?NC_002947 = 6158429 92 (1.130)intergenic (+95/‑12) PP_5401/PP_5739 hypothetical protein/hypothetical protein

Only 100 of 120 total aligned reads displayed.

ATACGTCGGGCACGTTCGCAAATTGCTGGGAGAGATGATTAATAATGGCCCACCTTTTGACTGAGTAGCTACCAGGCGCTTTCGGGTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACGCCGCTAAACAAGCGACCTACGCTGAACACACTAGCGAGCGCACACAAGCCTCGCCAGATACGGCAAAGCATAAGCTTCCAGCTCATTG  >  NC_002947/6158271‑6158568
                                                                                                                                                     |                                                                                                                                                     
aTACGTCGGGCACGTTCGCAAATTGCTGGGAGAGATGATTAATAATGGCCCACCTTTTGACTGAGTAGCTACCAGGCGCTTTCGGGTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG                                                                                                                                                       >  1:1172442‑M1/1‑150 (MQ=255)
           aCGTTCGCAAATTGCTGGGAGAGATGATTAATAATGGCCCACCTTTTGACTGAGTAGCTACCAGGCGCTTTCGGGTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCAcg                                                                                                                                           >  1:2298212‑M2/1‑148 (MQ=255)
               tCGCAAATTGCTGGGAGAGATGATTAATAATGGCCCACCTTTTGACTGAGTAGCTACCAGGCGCTTTCGGGTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCGtgctgcggccggcag                                                                                                                                        <  2:2320508‑M1/150‑16 (MQ=255)
                  cAAATTGCTGGGAGAGATGATTAATAATGGCCCACCTTTTGACTGAGTAGCTACCAGGCGCTTTCGGGTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCAcggcagggt                                                                                                                                    <  2:1950583‑M2/150‑10 (MQ=255)
                   aaaTTGCTGGGAGAGATGATTAATAATGGCCCACCTTTTGACTGAGTAGCTACCAGGCGCTTTCGGGTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCCAAATCCTTGCAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTc                                                                                                                                   <  2:1894806/150‑1 (MQ=255)
                              agagaTGATTAATAATGGCCCACCTTTTGACTGAGTAGCTACCAGGCGCTTTCGGGCTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTAt                                                                                                                        <  1:615232/150‑1 (MQ=255)
                                agaTGATTAATAATGGCCCACCTTTTGACTGAGTAGCTACCAGGCGCTTTCGGGTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATgg                                                                                                                      <  1:2295315/150‑1 (MQ=255)
                                agaTGATTAATAATGGCCCACCTTTTGACTGAGTAGCTACCAGGCGCTTTCGGGTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATgg                                                                                                                      <  2:1172442/150‑1 (MQ=255)
                                    gatTAATAATGGCCCACCTTTTGACTGAGTAGCTACCAGGCGCTTTCGGGTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTcc                                                                                                                  >  2:713450/1‑149 (MQ=255)
                                    gatTAATAATGGCCCACCTTTTGACTGAGTAGCTACCAGGCGCTTTCGGGTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCg                                                                                                                  >  1:1989871/1‑150 (MQ=255)
                                     atTAATAATGGCCCACCTTTTGACTGAGTAGCTACCAGGCGCTTTCGGGTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCgca                                                                                                                                                <  2:2125344/119‑1 (MQ=255)
                                     atTAATAATGGCCCACCTTTTGACTGAGTAGCTACCAGGCGCTTTCGGGTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCgca                                                                                                                                                >  1:2125344/1‑119 (MQ=255)
                                          taatGGCCCACCTTTTGACTGAGTAGCTACCAGGCGCTTTCGGGTTCTCAAGGTGTACTGATTGATCAGTAAGCGCTACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGa                                                                                                            <  1:412251/150‑1 (MQ=255)
                                          taatGGCCCACCTTTTGACTGAGTAGCTACCAGGCGCTTTCGGGTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCAcggcagggt                                                                                                                                    >  1:993873‑M2/1‑117 (MQ=255)
                                              ggCCCACCTTTTGACTGAGTAGCTACCAGGCGCTTTCGGGTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCaa                                                                                                        <  1:935774/150‑1 (MQ=255)
                                                cccACCTTTTGACTGAGTAGCTACCAGGCGCTTTCGGGTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGc                                                                                                      >  2:1224698/1‑150 (MQ=255)
                                                cccACCTTTTGACTGAGTAGCTACCAGGCGCTTTCGGGTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGc                                                                                                      <  1:1950583/150‑1 (MQ=255)
                                                 ccACCTTTTGACTGAGTAGCTACCAGGCGCTTTCGGGTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCa                                                                                                     >  1:1747105/1‑150 (MQ=255)
                                                  cACCTTTTGACTGAGTAGCTACCAGGCGCTTTCGGGTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGc                                                                                                      <  2:2233364/148‑1 (MQ=255)
                                                   aCCTTTTGACTGAGTAGCTACCAGGCGCTTTCGGGTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCata                                                                                                   >  1:495418/1‑150 (MQ=255)
                                                     cTTTTGACTGAGTAGCTACCAGGCGCTTTCGGGTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCAcggcagg                                                                                                                                      >  2:1954408‑M2/1‑106 (MQ=255)
                                                     cTTTTGACTGAGTAGCTACCAGGCGCTTTCGGGTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCAcggcagg                                                                                                                                      <  1:1954408‑M2/113‑8 (MQ=255)
                                                     cTTTTGACTGAGTAGCTACCAGGCGCTTTCGGGTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATc                                                                                                 >  2:1571745/1‑150 (MQ=255)
                                                     cTTTTGACTGAGTAGCTACCAGGCGCTTTCGGGTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATc                                                                                                 <  2:495418/150‑1 (MQ=255)
                                                             tGAGTAGCTACCAGGCGCTTTCGGGTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCAcgc                                                                                         >  2:1258974/1‑150 (MQ=255)
                                                                gTAGCTACCAGGCGCTTTCGGGTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑TCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCAcgccgc                                                                                      >  2:1143441/1‑150 (MQ=255)
                                                                 tAGCTACCAGGCGCTTTCGGGTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACGCCGCt                                                                                     >  2:2159517/1‑150 (MQ=255)
                                                                   gCTACCAGGCGCTTTCGGGTTCTCAAGGGGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACGCCGCTaa                                                                                   >  1:1792737/1‑150 (MQ=255)
                                                                    cTACCAGGCGCTTTCGGGTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCa                                                                                               >  1:1292997/1‑137 (MQ=255)
                                                                     tACCAGGCGCTTTCGGGTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCAcgc                                                                                         >  1:167258/1‑142 (MQ=255)
                                                                     tACCAGGCGCTTTCGGGTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCAcgc                                                                                         <  2:167258/142‑1 (MQ=255)
                                                                      aCCAGGCGCTTTCGGGTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGc                                                                                                                              >  2:1738430/1‑104 (MQ=255)
                                                                           gcgcTTTCGGGTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACGCCGCTAAACAAGCGa                                                                           >  2:2223107/1‑150 (MQ=255)
                                                                            cgcTTTCGGGTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACGCCGCTAAACAAGCGAc                                                                          <  2:936365/150‑1 (MQ=255)
                                                                               tttCGGGTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACGCCGCTAAACAAGCGACCTa                                                                       >  1:1724033/1‑150 (MQ=255)
                                                                                  cggtgtctcAAGGTGTACGGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACGCCGCTAAACAAGCGACCTACGc                                                                    <  2:945264/145‑1 (MQ=255)
                                                                                    ggTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCGtgctgcggccggcagggtt                                                                                                                                    >  1:969712‑M1/1‑66 (MQ=255)
                                                                                    ggTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCGtgctgcggccggcagggtt                                                                                                                                    <  2:969712‑M1/85‑20 (MQ=255)
                                                                                    ggTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACGCCGCTAAACAAGCGACCTACGCTg                                                                  >  1:851940/1‑150 (MQ=255)
                                                                                         tcAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTAt                                                                                                                        <  2:1467947/91‑1 (MQ=255)
                                                                                         tcAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTAt                                                                                                                        >  1:1467947/1‑91 (MQ=255)
                                                                                         tcAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACGCCGCTAAACAAGCGACCTACGCTGAacac                                                             >  2:404720/1‑150 (MQ=255)
                                                                                           aaGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCGTGCTGCGGCggcagggttcttccaaggattgtgc                                                                                                                     >  1:218517‑M2/1‑69 (MQ=255)
                                                                                           aaGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCGTGCTGCGGCggcagggttcttccaaggattgtgc                                                                                                                     <  2:218517‑M2/94‑26 (MQ=255)
                                                                                           aaGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCCGGCCGGAGGCAACTATGGGTCGAGACGATCAAACTTCAGTAACTTTCCGGGAAACAAGCGACCTACGCTGAacacac                                                           >  1:2270139/1‑150 (MQ=255)
                                                                                              gtgtACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACGCCGCTAAACAAGCGACCTACGCTGAACACACTag                                                        <  2:1724033/150‑1 (MQ=255)
                                                                                                  aCTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACGCCGCTAAACAAGCGACCTACGCTGAACACACTagcgag                                                    <  1:2159517/150‑1 (MQ=255)
                                                                                                   cTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAg                                                                                                       <  1:868103/98‑1 (MQ=255)
                                                                                                   cTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAg                                                                                                       >  2:868103/1‑98 (MQ=255)
                                                                                                   cTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACGCCGCTAAACAAGCGACCTACGCTGAACACACTagcgagc                                                   >  1:160966/1‑150 (MQ=255)
                                                                                                   cTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACGCCGCTAAACAAGCGACCTACGCTGAACACACTagc                                                       <  1:195327/146‑1 (MQ=255)
                                                                                                   cTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACGCCGCTAAACAAGCGACCTACGCTGAACACACTagc                                                       >  2:195327/1‑146 (MQ=255)
                                                                                                      attgatCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCAcggcagggt                                                                                                                                    >  2:521587‑M2/1‑57 (MQ=255)
                                                                                                      attgatCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCAcggcagggt                                                                                                                                    <  1:521587‑M2/66‑10 (MQ=255)
                                                                                                      attgatCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACGCCGCTAAACAAGCGACCTACGCTGAacacac                                                           <  2:55253/139‑1 (MQ=255)
                                                                                                      attgatCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACGCCGCTAAACAAGAGACCTACGCTGAACACACTAGCGAGCGca                                                >  1:1329690/1‑150 (MQ=255)
                                                                                                      attgatCAGTAAGCGCGACGCTGCACAAACCATGGACGAACGTTCAGT‑TCCTGACAATGTGTGAAGCAAAGCAATTATGGGTCGAGGCGATCAAGCATATCCAGCACGCCGCTAAACAAGCGACCTACGCTGAACACACTAGCGAGCGca                                                >  1:636095/1‑150 (MQ=255)
                                                                                                        tgatCAGTAAGCGCGACGCTGGACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACGCCGCTAAACAAGCGACCTACGCTGa                                                                 <  1:1874661/131‑1 (MQ=255)
                                                                                                        tgatCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACGCCGCTAAACAAGCGACCTACGCTGa                                                                 >  2:1874661/1‑131 (MQ=255)
                                                                                                           tCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACGCCGCTAAACAAGCGACCTACGCTGAACACACTAGCGAGCGCACACaa                                           <  1:1187241/150‑1 (MQ=255)
                                                                                                           tCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACGCCGCTAAACAAGCGACCTACGCTGAACACACTAGCGAGCGCACACaa                                           <  1:1258974/150‑1 (MQ=255)
                                                                                                              gTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATc                                                                                                 >  2:1506200/1‑93 (MQ=255)
                                                                                                              gTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATc                                                                                                 <  1:1506200/93‑1 (MQ=255)
                                                                                                                aaGCGCGACGCTGCACAATCCTTGGAAGAACCCTCCTG‑TTCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACGCCGCTAAACAAGCGACCTACGCTGAACACACTAGCGAGCGCACACAAGCCTc                                      <  1:713450/150‑1 (MQ=255)
                                                                                                                     cgACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACGCCGCTAAACAAGCGACCTACGCTGAACACACTAGCGAGCGCACACAAGCCTCGCCAg                                 <  1:339921/150‑1 (MQ=255)
                                                                                                                      gACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACGCCGCTAAACAAGCGACCTACGCTGAACACACTAGCGAGCGCACACAAGCCTCGCCAGa                                <  1:1143441/150‑1 (MQ=255)
                                                                                                                         gCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACGCCGCTAAACAAGCGACCTACGCTGAACACACTAGCGAGCGCACACAAGCCTCGCCAGATAc                             >  1:1510771/1‑150 (MQ=255)
                                                                                                                           tGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACGCCGCTAAACAAGCGACCTACGCTGAACACACTAGCGAGCGCACACAAGCCTCGCCAGATACgg                           <  1:1030416/150‑1 (MQ=255)
                                                                                                                            gCACAATCCTTGGAAGAACCCTGCCGgccgcagcacggcagggttcttccaaggattgtgcagcgtcgcgcttactgatcaatcagtacacctt                                                                                   <  2:218517‑M1/94‑69 (MQ=255)
                                                                                                                            gCACAATCCTTGGAAGAACCCTGCCGgccgcagcacggcagggttcttccaaggattgtgcagcgtcgcgcttactgatcaatcagtacacctt                                                                                   >  1:218517‑M1/1‑26 (MQ=255)
                                                                                                                                aaTCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACGCCGCTAAACAAGCGACCTACGCTGAACACACTagc                                                       <  2:1880372/117‑1 (MQ=255)
                                                                                                                                aaTCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACGCCGCTAAACAAGCGACCTACGCTGAACACACTagc                                                       >  1:1880372/1‑117 (MQ=255)
                                                                                                                                 aTCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATAAACAGCACGCCGCTAAACAAGCGACCTACGCTGAACACACTAGCGAGCGCACACAAGCCTCGCCAGATACGGCAAAGc                     >  1:522817/1‑150 (MQ=255)
                                                                                                                                  tCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACGCCGCTAAACAAGCGACCTACGCTGAACACACTAGCGAGCGCACACAAGCCTCGCCAGATACGGc                          <  2:1923895/144‑1 (MQ=255)
                                                                                                                                  tCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACGCCGCTAAACAAGCGACCTACGCTGAACACACTAGCGAGCGCACACAAGCCTCGCCAGATACGGc                          >  1:1923895/1‑144 (MQ=255)
                                                                                                                                   ccTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACGCCGCTAAACAAGCGACCTACGCTGAACACACTAGCGAGCGCACACAAGCCTCGCCAGATACGGCAAAGCAt                   >  2:2163971/1‑150 (MQ=255)
                                                                                                                                    cTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACGCCGCTAAACAAGCGACCTACGCTGAACACACTAGCGAGCGCACACAAGCCTCGCCAGATACGGCAAAGCATa                  <  2:1518503/150‑1 (MQ=255)
                                                                                                                                    cTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGCCGATGCAACTATGGGTCGAGCCGATCAAGCATATCCAGCACGCCGCTAAACAAGCGACCTCCGCTGAACACACTAGCGAGCGCACACAAGCCTCGCCAGATACGGCAAAGCATa                  >  2:1867988/1‑150 (MQ=255)
                                                                                                                                     ttGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACGCCGCTAAACAAGCGACCTACGCTGAACACACTAGCGAGCGCACACAAGCCTCGCCAGATACGGCAAAGCATaa                 <  2:1747105/150‑1 (MQ=255)
                                                                                                                                     ttGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACGCCGCTAAACAAGCGACCTACGCTGAACACACTAGCGAGCGCACACAAGCCTCGCCAGATACGGCAAAGCATaa                 >  2:1701267/1‑150 (MQ=255)
                                                                                                                                       ggAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACGCCGCTAAACAAGCGACCTACGCTGAACACACTAGCGAGCGCACACAAGCCTCGCCAGATACGGCAAAGCATAAGc               >  2:856143/1‑150 (MQ=255)
                                                                                                                                        gaagaaCCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACGCCGCTAAACAAGCGACCTACGCTGAACACACTAGCGAGCGCACACAAGCCTCGCCAGATACGGCAAAGCATAAGCt              >  2:1079314/1‑150 (MQ=255)
                                                                                                                                        gaagaaCCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACGCCGCTAAACAAGCGACCTACGCTGAACACACTAGCGAGCGCACACAAGCCTCGCCAGATACGGCAAAGCATAAGCt              >  2:2230021/1‑150 (MQ=255)
                                                                                                                                         aagaaCCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACGCAGAACTGAAAGCGACCTACGCTTAACACACTAGCGAGCAAAAACACGCCTGGTCAGAAACGGCAAAGCATAAGCtt             >  1:1211045/1‑150 (MQ=255)
                                                                                                                                            aaCCCTGCCG‑GCCGCAGCAcggcagggttcttccaaggattgtgcagcgtcgcgcttactgatcaatcagtacaccttgagaacc                                                                           <  2:969712‑M2/85‑67 (MQ=255)
                                                                                                                                            aaCCCTGCCG‑GCCGCAGCAcggcagggttcttccaaggattgtgcagcgtcgcgcttactgatcaatcagtacaccttgagaacc                                                                           >  1:969712‑M2/1‑19 (MQ=255)
                                                                                                                                            aaCCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACGCCGCTAAACAAGCGACCTACGTTGAACACACGATCGAGCGCACACAGGCCTCGCCAGATACGGCAAAGCATAAGCTTCCa          <  2:851940/150‑1 (MQ=255)
                                                                                                                                             aCCCTGCCGtgctgcggccggcagggttcttccaaggattgtgcagcgtcgcgcttactgatcaatcagtacaccttgagaacccgaaagcgcctggtagctactcagtcaaaaggtgggccattattaatcatctctcccagcaatttg          <  2:1950583‑M1/150‑142 (MQ=255)
                                                                                                                                             aCCCTGCCGtgctgcggccggcagggttcttccaaggattgtgcagcgtcgcgcttactgatcaatcagtacaccttgagaacccgaaagcgcctggtagctactcagtcaaaaggtgggccatta                                  <  2:993873‑M1/126‑118 (MQ=255)
                                                                                                                                             aCCCTGCCGtgctgcggccggcagggttcttccaaggattgtgcagcgtcgcgcttactgatcaatcagtacaccttgagaacccgaaagcgcctggtagctactcagtcaaaaggtgggccatta                                  >  1:993873‑M1/1‑9 (MQ=255)
                                                                                                                                             aCCCTGCCGtgctgcggccggcagggttcttccaaggattgtgcagcgtcgcgcttactgatcaat                                                                                              <  1:521587‑M1/66‑58 (MQ=255)
                                                                                                                                             aCCCTGCCGtgctgcggccggcagggttcttccaaggattgtgcagcgtcgcgcttactgatcaat                                                                                              >  2:521587‑M1/1‑9 (MQ=255)
                                                                                                                                               ccTGCCGtgctgcggccggcagggttcttccaaggattgtgcagcgtcgcgcttactgatcaatcagtacaccttgagaacccgaaagcgcctggtagctactcagtcaaaag                                             <  1:1954408‑M1/113‑107 (MQ=255)
                                                                                                                                               ccTGCCGtgctgcggccggcagggttcttccaaggattgtgcagcgtcgcgcttactgatcaatcagtacaccttgagaacccgaaagcgcctggtagctactcagtcaaaag                                             >  2:1954408‑M1/1‑7 (MQ=255)
                                                                                                                                               ccTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACGCCGCTAAACAAGCGACCTACGCTGAACACACTAGCGAGCGCACACAAGCCTCGCCAGATACgg                           <  2:36704/130‑1 (MQ=255)
                                                                                                                                                cTGCCG‑GCCGCAGCAcggcagggttcttccaaggattgtgcagcgtcgcgcttactgatcaatcagtacaccttgagaacccgaaagcgcctggtagctactcagtcaaaaggtgggccattattaatcatctctcccagcaatttgcga      <  2:2320508‑M2/150‑136 (MQ=255)
                                                                                                                                                   ccg‑gccgCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCAcgcc                                                                                        >  2:1308762/1‑65 (MQ=255)
                                                                                                                                                   ccg‑gccgCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCAcgcc                                                                                        <  1:1308762/65‑1 (MQ=255)
                                                                                                                                                    cg‑gccgCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACGCCGCTAAACAAGCGACCTACGCTGAACACACTAGCGAGCGCACACAACCCTCGCCAGATACGGCAAAGCATAAGCTTCCAGCTCATTg  <  1:2223107/150‑1 (MQ=255)
                                                                                                                                                    cGtgctgcggccggcagggttcttccaaggattgtgcagcgtcgcgcttactgatcaatcagtacaccttgagaacccgaaagcgcctggtagctactcagtcaaaaggtgggccattattaatcatctctcccagcaatttgcgaacgt   >  1:2298212‑M1/1‑2 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
ATACGTCGGGCACGTTCGCAAATTGCTGGGAGAGATGATTAATAATGGCCCACCTTTTGACTGAGTAGCTACCAGGCGCTTTCGGGTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACGCCGCTAAACAAGCGACCTACGCTGAACACACTAGCGAGCGCACACAAGCCTCGCCAGATACGGCAAAGCATAAGCTTCCAGCTCATTG  >  NC_002947/6158271‑6158568

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.