New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 85049 =97 (1.100)12 (0.160) 11/214 NT 11.7% intergenic (+27/+103) aroE/PP_0075 shikimate 5‑dehydrogenase/choline sulfate transporter
?NC_002947 85122 = 97 (1.280)intergenic (+100/+30) aroE/PP_0075 shikimate 5‑dehydrogenase/choline sulfate transporter

Only 100 of 149 total aligned reads displayed.

ATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCTGCGGCCTGGCCCGGTGCAAGGTCAAACTCCCCCCCAATCGCCGCAACCGCCGCGC  >  NC_002947/84973‑85271
                                                                                                                                                     |                                                                                                                                                     
aTACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATg                                                                                                                                                       <  1:1846715/150‑1 (MQ=255)
aTACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATg                                                                                                                                                       <  1:1206173/150‑1 (MQ=255)
 tACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATgg                                                                                                                                                      >  2:2047569/1‑150 (MQ=255)
          ggTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAg                                                                                                                                             <  2:1263097/150‑1 (MQ=255)
            tgtTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCa                                                                                                                                           >  2:1853987/1‑150 (MQ=255)
                 gCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGc                                                                                                                                            >  2:2103157/1‑144 (MQ=255)
                 gCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGc                                                                                                                                            <  1:2103157/144‑1 (MQ=255)
                  cTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAATTCCTTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCa                                                                                                                                     >  1:1914725/1‑150 (MQ=255)
                  cTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGAccac                                                                                                                                     <  1:2284512/150‑3 (MQ=255)
                   tGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCTCGATGGGCTGCAAAGCAGACCCAg                                                                                                                                    >  2:181450/1‑150 (MQ=255)
                   tGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAg                                                                                                                                    <  1:551386/150‑1 (MQ=255)
                      aCTGCGCAGGCAAATCGGTGGGGGCTACGCTCGCCGGGGCCGCTTGGTGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAAt                                                                                                                                 >  2:1194829/1‑150 (MQ=38)
                         gcgcCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATccc                                                                                                                              <  1:1433316/150‑1 (MQ=255)
                            ccGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAAc                                                                                                                           <  2:2325107/150‑1 (MQ=255)
                            ccGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAAc                                                                                                                           <  1:1853987/150‑1 (MQ=255)
                            ccGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAAc                                                                                                                           <  1:2148393/150‑1 (MQ=255)
                             cGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAAcc                                                                                                                          >  2:2191916/1‑150 (MQ=255)
                                   ctcgctcgGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTc                                                                                                                    <  1:880298/150‑1 (MQ=255)
                                   ctcgctcgGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTc                                                                                                                    <  1:108263/150‑1 (MQ=255)
                                    tcgctcgGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCAttat                                                                                                                   >  1:2127452/1‑148 (MQ=255)
                                      gctcgGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTg                                                                                                                                                  >  2:2221112/1‑117 (MQ=255)
                                      gctcgGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTg                                                                                                                                                  <  1:2221112/117‑1 (MQ=255)
                                      gctcgGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTc                                                                                                                 >  1:439387/1‑150 (MQ=255)
                                             gCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCAGCCTTGCGTCGAGATGGGCTGCAAAGCAGAACAAGCATCCCAACCTCGTTCCTCAAACCgg                                                                                                          >  2:482022/1‑150 (MQ=39)
                                              cTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGa                                                                                                         >  2:1723835/1‑150 (MQ=255)
                                               tGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGAt                                                                                                        >  1:1680199/1‑150 (MQ=255)
                                                  gCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGATCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCgg                                                                                                     >  1:1312828/1‑150 (MQ=255)
                                                  gCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCgg                                                                                                     <  2:1680199/150‑1 (MQ=255)
                                                   cTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTTCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCggg                                                                                                    <  1:966208/150‑1 (MQ=255)
                                                    tGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGc                                                                                                   >  1:1729586/1‑150 (MQ=255)
                                                    gcgatggggCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGc                                                                                                   >  2:2212677/6‑150 (MQ=255)
                                                     ggCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGca                                                                                                  <  1:2191916/150‑1 (MQ=255)
                                                            gtctgctttgcagcctATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACaa                                                                                               <  2:2041066‑M1/130‑1 (MQ=255)
                                                            gtctgctttgcagcctATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACaa                                                                                               >  1:2041066‑M1/17‑146 (MQ=255)
                                                            gCCGCTTGGCGGCCATATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCACCCTCATTCCTCAAACCGGATCGGGCACAACTcc                                                                                           <  1:414809/150‑1 (MQ=255)
                                                             ccGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCCCAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCa                                                                                          <  1:840765/150‑1 (MQ=255)
                                                              cGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCAc                                                                                         <  2:1639654/150‑1 (MQ=255)
                                                               gCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACTCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCAcc                                                                                        >  2:1494033/1‑150 (MQ=255)
                                                                 tttgcagcccatcgcgacgcaaggccgctcccacagaggatcggcgtacgacgtactttgtgggaacggccttgcgtcgcgataGGGCCGCAAAGCAGACCCAGAATCCCAAACTCATTCCTCCAGCCGGACCCGGAACATCTCTGcccc                                                                                      >  2:1885702‑M2/85‑150 (MQ=255)
                                                                 ttGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCCCATTCCTCAAACCGGATCGGGCACAACTCCAcccc                                                                                      >  2:1515700/1‑150 (MQ=255)
                                                                  tGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCt                                                                                     <  1:1400616/150‑1 (MQ=255)
                                                                    gcggcCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAAc                                                                                                                           >  1:1584196/1‑110 (MQ=255)
                                                                    gcggcCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTc                                                                                   <  2:125932/150‑1 (MQ=255)
                                                                    gcggcCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTc                                                                                   <  1:2212677/150‑1 (MQ=255)
                                                                      ggcCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCa                                                                                 <  2:439387/150‑1 (MQ=255)
                                                                        cccTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGc                                                                               <  2:2012761/150‑1 (MQ=255)
                                                                         ccTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGca                                                                                                  <  2:452491/130‑1 (MQ=255)
                                                                          cTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATc                                                                                                                                >  1:1280348/1‑99 (MQ=255)
                                                                          cTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATc                                                                                                                                <  2:1280348/99‑1 (MQ=255)
                                                                           tagCGCGACGAAGGGCCGTTCCCATAAAGGACGTCGTACGCCGATCCTCTGTGGTAGCGGCATTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTc                                                                            >  1:482022‑M1/4‑150 (MQ=255)
                                                                           tATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTc                                                                            >  2:1116377/1‑150 (MQ=255)
                                                                           tATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTc                                                                            <  1:2047569/150‑1 (MQ=255)
                                                                           tATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTc                                                                            <  1:1471257/150‑1 (MQ=255)
                                                                            ATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCt                                                                           >  2:473663‑M1/1‑150 (MQ=255)
                                                                              CGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGc                                                                         >  1:1513276‑M1/1‑150 (MQ=255)
                                                                              CGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCCCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGc                                                                         >  1:1515700‑M1/1‑150 (MQ=255)
                                                                                    GCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGACGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAActcc                                                                   >  1:1194829‑M1/1‑150 (MQ=255)
                                                                                        GGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGa                                                               >  1:2244939‑M1/1‑150 (MQ=255)
                                                                                         GCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGAt                                                              >  1:1723835‑M1/1‑150 (MQ=255)
                                                                                          CCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGAccc                                                                                                                                      >  1:407116‑M1/1‑77 (MQ=255)
                                                                                          CCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGAccc                                                                                                                                      <  2:407116‑M1/77‑1 (MQ=255)
                                                                                          CCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGATGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATc                                                             >  1:2283588‑M1/1‑150 (MQ=255)
                                                                                             ttCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTc                                                                                                                    <  2:938655/92‑1 (MQ=255)
                                                                                             ttCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTc                                                                                                                    >  1:938655/1‑92 (MQ=255)
                                                                                             ttCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATc                                                                                                       <  1:1106977/105‑1 (MQ=255)
                                                                                                gatcggcgTACGACGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCTGc                                                       >  2:725581/8‑150 (MQ=255)
                                                                                                ccACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCa                                                                                                                       <  2:943884/86‑1 (MQ=255)
                                                                                                 cacagaggatcggcgtacgacgtactttgtgggaacggccttgcgtcgcgatGGGCTGCAAAGCAGACCCAGAATCCCAACCTc                                                                                                                        >  1:1490955‑M2/53‑84 (MQ=255)
                                                                                                 cacagaggatcggcgtacgacgtactttgtgggaacggccttgcgtcgcgatAGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCTGCg                                                      >  1:1837100‑M2/53‑150 (MQ=255)
                                                                                                 cacaAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCAc                                                                                         <  1:189650/115‑1 (MQ=255)
                                                                                                 cacaAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCAc                                                                                         >  2:189650/1‑115 (MQ=255)
                                                                                                 cacaAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTc                                                                                   <  1:1784424/121‑1 (MQ=255)
                                                                                                 cacaAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTc                                                                                   >  2:1784424/1‑121 (MQ=255)
                                                                                                 cacaAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCt                                                                           <  2:385108/129‑1 (MQ=255)
                                                                                                 cacaAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCTGCg                                                      >  2:1943928/1‑150 (MQ=255)
                                                                                                 cacaAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCACACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCTGCg                                                      >  1:378573/1‑150 (MQ=255)
                                                                                                    aaaGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCTGCGGcc                                                   >  2:1952875/1‑150 (MQ=255)
                                                                                                       gTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATCGGAAGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCTGCGGCCTgg                                                >  2:326557/1‑150 (MQ=255)
                                                                                                        gatcggcgtacgacgtactttgtgggaacggccttgcgtcgcgatGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCTGCGGCCTGGc                                               >  2:1874792‑M2/46‑150 (MQ=255)
                                                                                                             cgtACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCTGCGGCCTGGCCCGGt                                          <  2:1312828/150‑1 (MQ=255)
                                                                                                             cgtACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCTGCGGCCTGGCCCGGt                                          <  1:319293/150‑1 (MQ=255)
                                                                                                                 cGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCTGCGGCCTGGCCCGGTGCaa                                      <  1:1116377/150‑1 (MQ=255)
                                                                                                                  gCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCTGCGGCCTGGCCCGGTGCAAg                                     <  2:1097000/150‑1 (MQ=255)
                                                                                                                   gacgtactttgtgggaacggccttgcgtcgcgatGGGTTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCTGCGGCCTGGCCCGGTGCAAgg                                    <  1:1874792‑M2/116‑1 (MQ=255)
                                                                                                                   cctaTCCTCTGTGGGAGCGGGCTGGCGGCGCGAGGGGCTGCAAAGCAGACCCAGAATCCCAACCTCTCTTCCCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCTGCGGCCTGGCCCGGTGCAAgg                                    <  1:1677258/147‑1 (MQ=255)
                                                                                                                    cGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCTGCGGCCTGGCCCGGTGCAAGGt                                   >  1:793647/1‑150 (MQ=255)
                                                                                                                     gATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCTGCGGCCTGGCCCGGTGCAAGGTc                                  >  2:1183420/1‑150 (MQ=255)
                                                                                                                          tctGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCAc                                                                                         <  2:162208/90‑1 (MQ=255)
                                                                                                                          tctGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCAc                                                                                         >  1:162208/1‑90 (MQ=255)
                                                                                                                              tgGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCTGCGGCCTGGCCCGGTGCAAGGTCAAACTcccc                         <  1:725581/150‑1 (MQ=255)
                                                                                                                               ggggacggccttgcgtcgcgatAGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCTGCGGCCTGGCCCGGTGCAAGGTCACACTccccc                        >  1:82365‑M2/23‑150 (MQ=255)
                                                                                                                                ggAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCTGCGGCCTGGCCCGGTGCAAGGTCAAACTcccccc                       <  1:2020666/150‑1 (MQ=255)
                                                                                                                                     ggccttgcgtcgcgatGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCTGCGGCCTGGCCCGGTGCAAgg                                    <  2:692753‑M2/116‑1 (MQ=255)
                                                                                                                                      gccttgcgtcgcgatGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCTGCGGCCTGGCCCGGTGCAAGGTCAAACTCCCCCCCAATcg                 >  1:17732‑M2/16‑150 (MQ=255)
                                                                                                                                        cttgcgtcgcgatGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCTGCGGCCTGGCCCGGTGCAAGGTCAAACTCCCCCCCAATcgcc               >  1:1822933‑M2/14‑150 (MQ=255)
                                                                                                                                         ttgcgtcgcgatGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCTGCGGCCTGGCCCGGTGCAAGGTCAAACTCCCCCCCAATcgccg              >  1:439279‑M2/13‑150 (MQ=255)
                                                                                                                                                  atagggCCGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCTGCGGCCTGGCCCGGTGCAAGGTCAAACTCCCCCCCAATCGCCGCAAccgccg     <  1:1885702/147‑1 (MQ=255)
                                                                                                                                                   atGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACCCCTCGATCACCTGCGGCCTGGCCCGGTGCAAGGTCAAACTCCCCCCCAATCGCCGCAACcgccgc    <  2:1339640‑M2/148‑1 (MQ=255)
                                                                                                                                                   atGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATCCCTCAAACCGGATCGGGCACAACTCCAc                                                                                         <  1:74675‑M2/63‑1 (MQ=255)
                                                                                                                                                     gggCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCTGCGGCCTGGCCCGGTGCAAGGTCAAACTCCCCCCCAATCGCCGCAACCGCCgcgc  <  2:2268845/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
ATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCTGCGGCCTGGCCCGGTGCAAGGTCAAACTCCCCCCCAATCGCCGCAACCGCCGCGC  >  NC_002947/84973‑85271

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.