New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1561044 =91 (1.030)6 (0.070) 6/240 NT 6.3% coding (1089/1875 nt) pctA methyl‑accepting chemotaxis protein PctA
?NC_002947 1561078 = 89 (1.040)coding (1055/1875 nt) pctA methyl‑accepting chemotaxis protein PctA

Only 100 of 111 total aligned reads displayed.

GCCGGCGATTTCCTGAGCCGCAGCGCCCAGTTCGTTGATGGCGGCTGCGACACTGTTGGTGCGGTTGGACTGCTCGTCGGAGTTGGTCATCGACGAGTTCGAAGCGCTGATCACCCGCAGGGCCACTTCGTTGACCTGCTCGGTGGCTGAGGACACTTCGCGAATGCTGCTGTGAATGCGTTCGACGAAGCGGTTGAAGGCGTTGCCGAGGACACCGAATTCGTCGTGGCTGTGGATGTGCAGGCGCTTGGTCAGGTCGCCCTCACCTTCGGCGATGTCTTCCATGGCG  >  NC_002947/1560933‑1561221
                                                                                                                                                 |                                                                                                                                               
 ccGGTGATTCCCTGAGCAGCAGGATCCAGTTCGTTGATGGCGGCTGCGACACTGTTGGTGCGGTTGGACTGCTCGTCGGAGTTGGTCATCGACGAGTTCGAAGCGCTGATCACCCGCAGGGCCACTTCGTTGACCTGCTCGGTGGCTGAg                                                                                                                                            <  2:1301054/150‑1 (MQ=255)
    gCGATTTCCTGAGCCGCAGCGCCCAGTTCGTTGATGGCGGCTGCGACACTGTTGGTGCGGTTGGACTGCTCGTCGGAGTTGGTCATCGACGAGTTCGAAGCGCTGATCACCCGCAGGGCCACTTCGTTGACCTGCTCGGTGGCTGAGGac                                                                                                                                         >  2:678277/1‑150 (MQ=255)
    gCGATTTCCTGAGCCGCAGCGCCCAGTTCGTTGATGGCGGCTGCGACACTGTTGGTGCGGTTGGAATGATCGTCGGAGTTGGTAATCGACGAGTTCGAAGCGATGATAACCCGGAGGGCAAGTTGGTTGACCTGCTCGGTGGCTGAGGac                                                                                                                                         >  1:1461068/1‑150 (MQ=255)
      gATTTCCTGAGCCGCAGCGCCCAGTTCGTTGATGGCGGCTGCGACACTGTTGGTGCGGTTGGACTGCTCGTCGGAGTTGGTCATCGACGAGTTCGAAGCGCTGATCACCCGCAGGGCCACTTCGTTGACCTGCTCGGTGGCTGAGGacac                                                                                                                                       >  2:1558197/1‑150 (MQ=255)
         ttCCTGAGCCGCAGCGCCCAGTTCGTTGATGGCGGCTGCGACACTGTTGGTGCGGTTGGACTGCTCGTCGGAGTTGGTCATCGACGAGTTCGAAGCGCTGATCACCCGCAGGGCCACTTCGTTGACCTGCTCGGTGGCTGAGGACACTTc                                                                                                                                    <  2:1506492/150‑1 (MQ=255)
           ccTGAGCCGCAGCGCCCAGTTCGTTGATGGCGGCTGCGACACTGTTGGTGCGGTTGGACTGCTCGTCGGAGTTGGTCATCGACGAGTTCGAAGCGCTGATCACCCGCAGGGCCACTTCGTTGACCTGCTCGGTGGCTGAGGACACTTcgc                                                                                                                                  >  1:831142/1‑150 (MQ=255)
            cTGAGCCGCAGCGCCCAGTTCGTTGATGGCGGCTGCGACACTGTTGGTGCGGTTGGACTGCTCGTCGGAGTTGGTCATCGACGAGTTCGAAGCGCTGATCACCCGCAGGGCCACTTCGTTGACCTGCTCGGTGGCt                                                                                                                                               >  2:1953160/1‑136 (MQ=255)
            cTGAGCCGCAGCGCCCAGTTCGTTGATGGCGGCTGCGACACTGTTGGTGCGGTTGGACTGCTCGTCGGAGTTGGTCATCGACGAGTTCGAAGCGCTGATCACCCGCAGGGCCACTTCGTTGACCTGCTCGGTGGCt                                                                                                                                               <  1:1953160/136‑1 (MQ=255)
               aGCCGCAGCGCCCAGTTCGTTGATGGCGGCTGCGACACTGTTGGTGCGGTTGGACTGCTCGTCGGAGTTGGTCATCGACGAGTTCGAAGCGCTGATCACCCGCAGGGCCACTTCGTTGACCTGCTCGGTGGCTGAGGACACTTCGCGAAt                                                                                                                              <  1:117102/150‑1 (MQ=255)
                 acatccacagccacgacgaattcggtgtcctcggcaacgccttcaaccgcttcgtcgaacgcattcacagcagcattcgcgaagtgtcctcagcCACCCGCAGGGCCACTTCGTTGACCTGCTCGGTGGCTGAGGACACTTcgc                                                                                                                                  >  1:457710‑M1/95‑144 (MQ=255)
                 acatccacagccacgacgaattcggtgtcctcggcaacgccttcaaccgcttcgtcgaacgcattcacagcagcattcgcgaagtgtcctcagcCACCCGCAGGGCCACTTCGTTGACCTGCTCGGTGGCTGAGGACACTTcgc                                                                                                                                  <  2:457710‑M1/50‑1 (MQ=255)
                   gCAGCGCCCAGTTCGTTGATGGCGGCTGCGACACTGTTGGTGCGGTTGGACTGCTCGTCGGAGTTGGTCATCGACGAGTTCGAAGCGCTGATCACCCGCAGGGCCACTTCGTTGACCTGCTCGGTGGCTGAGGACACTTCGCGAAtgctg                                                                                                                          >  1:931106/1‑150 (MQ=255)
                   gCAGCGCCCAGTTCGTTGATGGCGGCTGCGACACTGTTGGTGCGGTTGGACTGCTCGTCGGAGTTGGTCATCGACGAGTTCGAAGCGCTGATCACCCGCAGGGCCACTTCGTTGACCTGCTCGGTGGCTGAGGACACTTCGCGAAtgctg                                                                                                                          >  2:1389512/1‑150 (MQ=255)
                   gCAGCGCCCAGTTCGTTGATGGCGGCTGCGACACTGTTGGTGCAGTTGGACTGCTCGTCGGAGTTGGTCATCGACGAGTTCGAAGCGCTGATCACCCGCAGGGCCACTTCGTTGACCTGCTCGGTGGCTGAGGACACTTCGCGAAtgctg                                                                                                                          >  2:1694451/1‑150 (MQ=255)
                                 gTTGATGGCGGCTGCGACACTGTTGGTGCGGTTGGACTGCTCGTCGGAGTTGGTCATCGACGAGTTCGAAGCGCTGATCACCCGCAGGGCCACTTCGTTGACCTGCTCGGTGGCTGAGGACACTTCGCGAATGCTGCTGTGAATGCGTTc                                                                                                            >  1:1280869/1‑150 (MQ=255)
                                 gTTGATGGCGGCTGCGACACTGTTGGTGCGGTTGGACTGCTCGTCGGAGTTGGTCATCGACGAGTTCGAAGCGCTGATCACCCGCAGGGCCACTTCGTTGACCTGCTCGGTGGCTGAGGACACTTCGCGAATGCTGCTGTGAATGCGTTc                                                                                                            >  1:1675193/1‑150 (MQ=255)
                                  ttGATGGCGGCTGCGACACTGTTGGTGCGGTTGGACTGCTCGTCGGAGTTGGTCATCGACGAGTTCGAAGCGCTGATCACCCGCAGGGCCACTTCGTTGATCTGCTCGGTGGCTGAGGACACTTCGCGAATGCTGCTGTGAATGCGTTcg                                                                                                           >  1:1088121/1‑150 (MQ=255)
                                   tGATGGCGGCTGCGACACTGTTGGTGCGGTTGGATTGCTCGTCGGAGTTGGTCATCGACGAGTTCGAAGCGCTGATCACCCGCAGTGCCACTTCGTTGACCTGCTCGGTGGCTGAGGACACTTCGCGAATGCTGCTGTGACTGCGTTcga                                                                                                          >  2:397672/1‑150 (MQ=255)
                                     aTGGCGGCTGCGACACTGTTGGTGCGGTTGGACTGCTCGTCGGAGTTGGTCATCGACGAGTTCGAAGCGCTGATCACCCGCAGGGCCACTTCGTTGACCTGCTCGGTGGCTGAGGACACTTCGCGAATGCTGCTGTGAATGCGTTcgacg                                                                                                        >  1:380501/1‑150 (MQ=255)
                                        gcggcTGCGACACTGTTGGTGCGGTGGGACTGCTCGTCGGAGTTGGTCATCGACGAGTTCGAAGCGCTGATCACCCGCAGGGCCACTTCGTTGACCTGCTCGGTGGCTGAGGACACTTCGCGAATGCTGCTGTGAATGCGTTCGACGAAg                                                                                                     >  1:1482190/1‑150 (MQ=255)
                                               tcggcaacgccttcaaccgcttcgtcgaacgcattcacagcagcattcgcgaagtgtcctcagcCACCCGCAGGGCCACTTCGTTGACCTGCTCGGTGGCTGa                                                                                                                                             >  2:320058‑M1/65‑103 (MQ=255)
                                               tcggcaacgccttcaaccgcttcgtcgaacgcattcacagcagcattcgcgaagtgtcctcagcCACCCGCAGGGCCACTTCGTTGACCTGCTCGGTGGCTGa                                                                                                                                             <  1:320058‑M1/39‑1 (MQ=255)
                                                gACACTGTTGGTGCGGTTGGACTGCTCGTCGGAGTTGGTCATCGACGAGTTCGAAGCGCTGATCACCCGCAGGGCCACTTCGTTGACCTGCTCGGTGGCTGAGGACACTTcg                                                                                                                                   <  2:167361/112‑1 (MQ=255)
                                                gACACTGTTGGTGCGGTTGGACTGCTCGTCGGAGTTGGTCATCGACGAGTTCGAAGCGCTGATCACCCGCAGGGCCACTTCGTTGACCTGCTCGGTGGCTGAGGACACTTcg                                                                                                                                   >  1:167361/1‑112 (MQ=255)
                                                gACACTGTTGGTGCGGTTGGACTGCTCGTCGGAGTTGGTCATCGACGAGTTCGAAGCGCTGATCACCCGCAGGGCCACTTCGTTGACCTGCTCGGTGGCTGAGGACACTTCGCGAATGCTGCTGTGAATGCGTTCGACGAAGCGGTTGaa                                                                                             >  1:1800921/1‑150 (MQ=255)
                                                gACACTGTTGGTGCGGTTGGACTGCTCGTCGGAGTTGGTCATCGACGAGTTCGAAGCGCTGATCACCCGCAGGGCCACTTCGTTGACCTGCTCGGTGGCTGAGGACACTTCGCGAATGCTGCTGTGAATGCGTTCGACGAAGCGGTTGaa                                                                                             <  2:831142/150‑1 (MQ=255)
                                                 acacTGTTGGTGCGGTTGGACTGCTCGTCGGAGTTGGTCATCGACGAGTTCGAAGCGCTGATCACCCGCAGGGCCACTTCGTTGACCTGCTCGGTGGCTGAGGACACTTCGCGaa                                                                                                                               >  2:240902/1‑115 (MQ=255)
                                                 acacTGTTGGTGCGGTTGGACTGCTCGTCGGAGTTGGTCATCGACGAGTTCGAAGCGCTGATCACCCGCAGGGCCACTTCGTTGACCTGCTCGGTGGCTGAGGACACTTCGCGaa                                                                                                                               <  1:240902/115‑1 (MQ=255)
                                                  cacTGTTGGTGCGGTTGGACTGCTCGTCGGAGTTGGTCATCGACGAGTTCGAAGCGCTGATCACCCGCAGGGCCACTTCGTTGACCTGCTCGGTGGCTGAGGACACTTCGCGAATGCTGATTGGAATGCGTTCGACGAAGCGGTTGAAgg                                                                                           <  1:1592945/150‑1 (MQ=255)
                                                   acTGTTGGTGCGGTTGGACTGCTCGTCGGAGTTGGTCATCGACGAGTTCGAAGCGCTGATCACCCGCAGGGCCACTTCGTTGACCTGCTCGGTGGCTGAGGACACTTCGCGAATGCTGCTGTGAATGCGTTCGACGAAGCGGTTGAAGGc                                                                                          <  1:570569/150‑1 (MQ=255)
                                                   acTGTTGGTGCGGTTGGACTGCTCGTCGGAGTTGGTCATCGACGAGTTCGAAGCGCTGATCACCCGCAGGGCCACTTCGTTGACCTGCTCGGTGGATGAGGACACTTCGCGAATGCTGCTGTGAATGCGTTCGACGAAGCGGTTGAAGGc                                                                                          >  2:1592945/1‑150 (MQ=255)
                                                     tGTTGGTGCGGTTGGACTGCTCGTCGGAGTTGGTCATCGACGAGTTCGAAGCGCTGATCACCCGCAGGGCCACTTCGTTGACCTGCTCGGTGGCTGAGGACACTTCGCGAATGCTGCTGTGAATGCGTTCGACGAAGCGGTTGaa                                                                                             >  1:1492078/1‑145 (MQ=255)
                                                     tGTTGGTGCGGTTGGACTGCTCGTCGGAGTTGGTCATCGACGAGTTCGAAGCGCTGATCACCCGCAGGGCCACTTCGTTGACCTGCTCGGTGGCTGAGGACACTTCGCGAATGCTGCTGTGAATGCGTTCGACGAAGCGGTTGaa                                                                                             <  2:1492078/145‑1 (MQ=255)
                                                     tGTTGGTGCGGTTGGACTGCTCGTCGGAGTTGGTCATCGACGAGTTCGAAGCGCTGATCACCCGCAGGGCCACTTCGTTGACCTGCTCGGTGGCTGAGGACACTTCGCGAATGCTGCTGTGAATGCGTTCGACGAAGCGGTTGAAGGCGt                                                                                        >  1:971535/1‑150 (MQ=255)
                                                      gTTGGTGCGGTTGGACTGCTCGTCGGAGTTGGTCATCGACGAGTTCGAAGCGCTGATCACCCGCAGGGCCACTTCGTTGACCTGCTCGGTGGCTGAGGACACTTCGCGAATGCTGCTGTGAATGCGTTCGACGAAGCGGTTGAAGGCGtt                                                                                       <  1:83861/150‑1 (MQ=255)
                                                       atGGTGCGGTTGGACTGCTCGTCGGAGTTCGTCATCGAAGAGTTCGAAGCGCTGATCACCCGCAGGGCCACTTCGTTGACCTGCTCGGTGGCTGAGGACACTTCGCGAATACTGCTGCGAATGCGATCGAATAAGCGGTTGAAGGCGTTg                                                                                      >  2:1397731/2‑150 (MQ=255)
                                                          gTGCGGTTGGACTGCTCGTCGGAGTTGGTCATCGACGAGTTCGAAGCGCTGATCACCCGCAGGGCCACTTCGTTGACCTGCTCGGTGGCTGAGGACACTTCGCGAATGCTGCTGTGAATGCGTTCGACGAAGCGGTTGAAGGCGTTGCCg                                                                                   >  1:536405/1‑150 (MQ=255)
                                                           tGCGGTTGGACTGCTCGTCGGAGTTGGTCATCGACGAGTTCGAAGCGCTGATCACCCGCAGGGCCACTTCGTTGACCTGCTCGGTGGCTGAGGACACTTCGCGAATGCTGCTGTGAATGCGTTCGACGAAGCGGTTGAAGGCGTTGCCGa                                                                                  <  1:2054385/150‑1 (MQ=255)
                                                           tGCGGTTGGACTGCTCGTCGGAGTTGGTCATCGACGAGTTCGAAGCGCTGATCACCCGCAGGGCCAACCCGATGAGCTTCTCGGTGGCTTAGTACACTTCGCGAATGCTGCTGTGAATGCGTTCGACCAAGCGGTTGAAGGCGTTGCCGa                                                                                  <  1:869683/150‑1 (MQ=255)
                                                            gCGGTTGGACTGCTCGTCGGAGTTGGTCATCGACGAGTTCGAAGCGCTGATCACCCGCAGGGCCACTTCGTTGACCTGCTCGGTGGCTGAGGACACTTCGCGAATGCTGCTGTGAATGCGTTCGACGAAGCGGTTGAAGGCGTTGCCGAg                                                                                 <  1:1912892/150‑1 (MQ=255)
                                                               gTTGGACTGCTCGTCGGAGTTGGTCATCGACGAGTTCGAAGCGCTGATCACCCGCAGGGCCTCTTCGTTGACCTGCTCGGTGGCTGAGGACACTTCGCGAATGCTGCTGTGAATGCGTTCGACGAAGCGGTTGAAGGCGTTGCCGAGGac                                                                              >  2:1625343/1‑150 (MQ=255)
                                                               gTTGGACTGCTCGTCGGAGTTGGTCATCGACGAGTTCGAAGCGCTGATCACCCGCAGGGCCACTTCGTTGACCTGACCAGAGCCTGAAGATAGTTCTCGAATGCTGCTGTGCATGCCTACCACCATGCTGTTGAAGGCGTTGCCGAGGac                                                                              >  1:1211905/1‑150 (MQ=255)
                                                                      tGCTCGTCGGAGTTGGTCATCGACGAGTTCGAAGCGCTGATCACCCGCAGGGCCACTTCGTTGACCTGCTCGGTGGCTGAGGACACTTCGCGAATGCTGCTGTGAATGCGTTc                                                                                                            >  1:2239425/1‑113 (MQ=255)
                                                                      tGCTCGTCGGAGTTGGTCATCGACGAGTTCGAAGCGCTGATCACCCGCAGGGCCACTTCGTTGACCTGCTCGGTGGCTGAGGACACTTCGCGAATGCTGCTGTGAATGCGTTCGACGAAGCGGTTGAAGGCGTTGCCGAGGACACCGaa                                                                        <  1:193096/149‑1 (MQ=255)
                                                                      tGCTCGTCGGAGTTGGTCATCGACGAGTTCGAAGCGCTGATCACCCGCAGGGCCACTTCGTTGACCTGCTCGGTGGCTGAGGACACTTCGCGAATGCTGCTGTGAATGCGTTCGACGAAGCGGTTGAAGGCGTTGCCGAGGACACCGaa                                                                        >  2:193096/1‑149 (MQ=255)
                                                                       gCTCGTCGGAGTTGGTCATCGACGAGTTCGAAGCGCTGATCACCCGCAGGGCCACTTCGTTGACCTGCTCGGTGGCTGAGGACACTTCGCGAATGCTGCTGTGAATGCGTTCGACGAAGCGGTTGAAGGCGTTGCCGAGGACACCGAAtt                                                                      <  2:2220164/150‑1 (MQ=255)
                                                                        cTCGTCGGAGTTGGTCATCGACGAGTTCGAAGCGCTGATCACCCGCAGGGCCACTTCGTTGACCTGCTCGGTGGCTGAGGACACTTCGCGAATGCTGCTGTGAATGCGTTCGACGAAGCGGTTGaa                                                                                             <  2:629763/126‑1 (MQ=255)
                                                                        cTCGTCGGAGTTGGTCATCGACGAGTTCGAAGCGCTGATCACCCGCAGGGCCACTTCGTTGACCTGCTCGGTGGCTGAGGACACTTCGCGAATGCTGCTGTGAATGCGTTCGACGAAGCGGTTGaa                                                                                             >  1:629763/1‑126 (MQ=255)
                                                                          cgtcgGAGTTGGTCATCGACGAGTTCGAAGCGCTGATCACCCGCAGGGCCACTTCGTTGCGCTGCTCTGGGGGTGAGGACAATTCGCGAATGCTGATGTGAATGCGTTCGACTAAGCGGTTGAAGGCGTTGCCGAGGACACCGAATtcgt                                                                   <  1:1694451/150‑1 (MQ=255)
                                                                          cgtcgGAGTTGGTCATCGACGAGTTCGAAGCGCTGATCACCCGCAGGGCCACTTCGTTGACCTGCTCGGTGGCTGAGGACACTTCGCGAATGCTGCTGTGAATGCGTTCGACGAAGCGGTTGAAGGCGTTGCCGAGGACACCGAATtcgt                                                                   <  2:1280869/150‑1 (MQ=255)
                                                                           gtcgGAGTTGGTCATCGACGAGTTCGAAGCGCTGATCACCCGCAGGGCCACTTCGTTGACCTGCTCGGTGGCTGAGGACACTTCGCGAATGCTGCTGTGAATGCGTTCGACGAAGCGGTTGAAGGCGTTGCCGAg                                                                                 >  2:722870/1‑135 (MQ=255)
                                                                           gtcgGAGTTGGTCATCGACGAGTTCGAAGCGCTGATCACCCGCAGGGCCACTTCGTTGACCTGCTCGGTGGCTGAGGACACTTCGCGAATGCTGCTGTGAATGCGTTCGACGAAGCGGTTGAAGGCGTTGCCGAg                                                                                 <  1:722870/135‑1 (MQ=255)
                                                                             cgGAGTTGGTCATCGACGAGTTCGAAGCGCTGATCACCCGCAGGGCCACTTCGTTGACCTGCTCGGTGGCTGAGGACACTTCGCGAATGCTGCTGTGAATGCGTTCGACGAAGCGGTTGAAGGCGTTGCCGAGGACACCGAATTcgtcgt                                                                <  1:1558197/150‑1 (MQ=255)
                                                                                      tCATCGACGAGTTCGAAGCGCTGATCACCCGCAGGGCCACTTCGTTGACCTGCTCGGTGGCTGAGGACACTTCGCGAATGCTGCTGTGAATGCGTTCGACGAAGCGGTTGAAGGCGTTGCCGAGGACACCGAATTCGTCGTGGCTGTGGa                                                       <  1:2194875/150‑1 (MQ=255)
                                                                                       cATCGCCGAGTTTGTTGCGCTGATCACCCGCAGGGCCACTTCGTTGACCTGCTCGGTGGCTGAGGACACTTCGCGAATGCTGCTGTGAATGCGTTCGACGAAGCGGTTGAAGGCGTTGCCGAGGACACCGAATTCGTCGTGGCTGTGGAt                                                      >  2:1676994/1‑150 (MQ=255)
                                                                                       cATCGACGAGTTCGAAGCGCTGATCACCCGCAGGGCCACTTCGTTGACCTGCTCGGTGGCTGAGGACACTTCGCGAATGCTGCTGTGAATGAGTTCGACGAAGCGGTTGAAGGCGTTGCCGAGGACACCGAATTCGTCGTGGCTGTGGAt                                                      >  2:1965684/1‑150 (MQ=255)
                                                                                         tCGACGAGTTCGAAGCGCTGATCACCCGCAGGGCCACTTCGTTGACCTGCTCGGTGGCTGAGGACACTTCGCGAATGCTGCTGTGAATGCGTTCGACGAAGCGGTTGAAGGCGTTGCCGAGGACACCGAATtcgt                                                                   >  1:1638368/1‑135 (MQ=255)
                                                                                         tCGACGAGTTCGAAGCGCTGATCACCCGCAGGGCCACTTCGTTGACCTGCTCGGTGGCTGAGGACACTTCGCGAATGCTGCTGTGAATGCGTTCGACGAAGCGGTTGAAGGCGTTGCCGAGGACACCGAATtcgt                                                                   <  2:1638368/135‑1 (MQ=255)
                                                                                          cgacgaGTTCGAAGCGCTGATCACCCGCAGGGCCACTTCGTTGACCTGCTCGGTGGCTGAGGACACTTCGCGAATGCTGCTGTGAATGCGTTCGACGAAGCGGTTGAAGGCGTTGCCGAGGACACCGAATTCGTCGTGGCTGTGGAtgtg                                                   <  1:2187006/150‑1 (MQ=255)
                                                                                           gacgaGTTCGAAGCGCTGATCACCCGCAGGGCCACTTCGTTGACCTGCTCGGTGGCTGAGGACACTTCGCGAATGCTGCTGTGAATGCGTTCGACGAAGCGGTTGAAGGCGTTGCCGAGGACACCGAATtc                                                                     <  2:455096/131‑1 (MQ=255)
                                                                                           gacgaGTTCGAAGCGCTGATCACCCGCAGGGCCACTTCGTTGACCTGCTCGGTGGCTGAGGACACTTCGCGAATGCTGCTGTGAATGCGTTCGACGAAGCGGTTGAAGGCGTTGCCGAGGACACCGAATtc                                                                     >  1:455096/1‑131 (MQ=255)
                                                                                           gacgaGTTCGAAGCGCTGATCACCCGCAGGGCCACTTCGTTGACCTGCTCGGTGGCTGAGGACACTTCGCGAATGCTGCTGTGAATGCGTTCGACGAAGCGGTTGAAGGAAGTGCCGAGGACACCGAATTCGTCGTGGCTGTGGATGTGc                                                  >  1:612950/1‑150 (MQ=255)
                                                                                             cgaGTTCGAAGCGCTGATCACCCGCAGGGCCACTTCGTTGACCTGCTCGGTGGCTGAGGACACTTCGCGAATGCTGCTGTGAATGCGTTCGACGAAGCGGTTGAAGGCGTTGCCGAGGACACCGAATTCGTCGTGGCTGTGGATGTGCAg                                                >  2:941820/1‑150 (MQ=255)
                                                                                             cgaGTTCGAAGCGCTGATCACCCGCAGGGCCACTTCGTTGACCTGCTCGGTGGCTGAGGACACTTCGCGAATGCTGCTGTGAATGCGTTCGACGAAGCGGTTGAAGGCGTTGCCGAGGACACCGAATTCGTCGTGGCTGTGGATGTGCAg                                                >  1:1557158/1‑150 (MQ=255)
                                                                                             cgaGTTCGAACCGCTGATCACCCGCAGGGCCACTTCGTTGACCTGCTCGGTGGCTGAGGACACTTCGCGAATGCTGCTGTGAATGCGTTCGACGAAGCGGTTGAAGGCGTTGCCGAGGACACCGAATTCGTCGTGGCTGTGGATGTGCAg                                                <  1:1397731/150‑1 (MQ=255)
                                                                                              ctgTTCGAAGCGCTGATCACCCGCAGGGCCACTTCGTTGACCTGCTCGGTGGCTGAGGACACTTCGCGAATGCTGCTGTGAATGCGTTCGACGAAGCGGTTGAAGGCGTTGCCGAGGACACCGAATTCGTCGTGGCTGTGGATGTGCAgg                                               <  1:1422321/148‑1 (MQ=255)
                                                                                               gcgaagtgtcctcagccaccgagcaggtcaacgaagtggccctgcgggtgGCTGAGGACACTTCGCGAATGCTGCTGTGAATGCGTTCGACGAAGCGGTTGAAGGCGTTGCCGAGGACACCGAATTCGTCGTGGCTGTGGAtgt                                                    >  1:457710‑M2/51‑144 (MQ=255)
                                                                                                 ttCGAAGCGCTGATCACCCGCAGGGCCACTTCGTTGACCTGCTCGGTGGCTGAGGACACTTCGCGAATgctgct                                                                                                                        >  2:2221302/1‑74 (MQ=255)
                                                                                                 ttCGAAGCGCTGATCACCCGCAGGGCCACTTCGTTGACCTGCTCGGTGGCTGAGGACACTTCGCGAATgctgct                                                                                                                        <  1:2221302/74‑1 (MQ=255)
                                                                                                 ttCGAAGCGCTGATCACCCGCAGGGCCACTTCGTTGACCTGCTCGGTGGCTGAGGACACTTCGCGAATGCTGCTGTGAATGCGTTCGACGAAGCGGTTGAAGGCGTTGCCGAGGACACCGAATTCGTCGTGGCTGTGGATGTGCAGgcgc                                            >  2:1241150/1‑150 (MQ=255)
                                                                                                 ttCGAAGCGCTGATCACCCGCAGGGCCACTTCGTTGACCTGCTCGGTGGCTGAGGACACTTCGCGAATGCTGCTGTGAATGCGTTCGACGAAGCGGTTGAAGGCGTTGCCGAGGACACCGAATTCGTCGTGGCTGTGGAGGTGCAGgcgc                                            <  2:1088121/150‑1 (MQ=255)
                                                                                                     aaGCGCTGATCACCCGCAGGGCCACTTCGTTGACCTGCTCGGTGGCTGAGGACACTTCGCGAATGCTGCTGTGAATGCGTTCGACGAAGCGGTTGAAGGCGTTGCCGAGGACACCGAATtcgtc                                                                  >  2:1002728/1‑124 (MQ=255)
                                                                                                     aaGCGCTGATCACCCGCAGGGCCACTTCGTTGACCTGCTCGGTGGCTGAGGACACTTCGCGAATGCTGCTGTGAATGCGTTCGACGAAGCGGTTGAAGGCGTTGCCGAGGACACCGAATtcgtc                                                                  <  1:1002728/124‑1 (MQ=255)
                                                                                                         gcTGATCACCCGCAGGGCCACTTCGTTGACCTGCTCGGTGGCTGAGGACACTTCGCGAATGCTGCTGTGAATGCGTTCGACGAAGCGGTTGAAGGCGTTGTCGAGGACACCGAATTCGTCGTGGCTGTGGATGTGCAGGCGCTTGGTCAg                                    <  2:931106/150‑1 (MQ=255)
                                                                                                          tcagccaccgagcaggtcaacgaagtggccctgcgggtgGCTGAGGACACTTCGCGAATGCTGCTGTGAATGCGTTCGACGAAGCGGTTGAAGGCGTTGCCGa                                                                                  >  2:320058‑M2/40‑103 (MQ=255)
                                                                                                           tGATCACCCGCAGGGCCACTTCGTTGACCTGCTCGGTGGCTGAGGACACTTCGCGAATGCTGCTGTGAATGCGTTCGACGAAGCGGTTGAAGGCGTTGCCGAGGACACCGAATTCGTCGTGGCTGTGGATGTGCAGGCGCTTGGTCAGGt                                  >  2:446250/1‑150 (MQ=255)
                                                                                                               CACCCGCAGGGCCACTTCGTTGACCTGCTCGGTGGCTGAGGACACTTCGCGAATGCTGCTGTGAATGCGTTCGACGAAGCGGTTGAAGGCGTTGCCGAGGACACCGAATTCGTCGTGGCTGTGGATGTGCAGGCGCTTGGTCAGGTCGcc                              <  1:1628323‑M1/150‑1 (MQ=255)
                                                                                                               CACCCGCAGGGCCACTTCGTTGACCTGCTCGGTGGCTGAGGACACTTCGCGAATGCTGCTGTGAATGCGTTCAACGAAGCGGTTGAAGGCGTTTCCGAGGACACCGAATTCGTCGTCGCTGTGGATGTGCAGGCGCTTGGTCAGGTCGcc                              >  2:287964‑M1/1‑150 (MQ=255)
                                                                                                                ACCCGCAGGGCCACTTCGTTGACCTGCTCGGTGGCTGAGGAAACTTCGCGAATGCTGCTGTGAATGCGTTCGACGAAGCGGTTGAAGGCGTTGCCGAGGACACCGAATTCGTCGTGGCTGTGGATGTGCAGGCGCTTGGTCAGGTCGccc                             <  2:603790‑M1/150‑1 (MQ=255)
                                                                                                                 cgagcaggtcaacgaagtggccctgctcggtgGCTGAGGACACTTCGCGAATGCTGCTGTGAATGCGTTCGACGAAGCGGTTGAAGGCGTTGCCGAGGACACCGAATTCGTCGTGGCTGTGGATGTGCAGGCGCTTGGTCAGGTCGccc                             <  2:1595485‑M2/117‑1 (MQ=255)
                                                                                                                 cgagcaggtcaacgaagtggccctgctcggtgGCTGAGGACACTTCGCGAATGCTGCTGTGAATGCGTTCGACGAAGCGGTTGAAGGCGTTGCCGAGGACACCGAATTCGTCGTGGCTGTGGATGTGCAGGCGCTTGGTCAGGTCGccc                             >  1:1595485‑M2/33‑149 (MQ=255)
                                                                                                                  CCGCAGGGCCACTTCGTTGACCTGCTCGGTGGCTGAGGACACTTCGCGAATGCTGCTGTGAATGCGTTCGACGAAGCGGTTGAAGGCGTTGCCGAGGACACCGAAt                                                                       <  2:1885668‑M1/106‑1 (MQ=255)
                                                                                                                  CCGCAGGGCCACTTCGTTGACCTGCTCGGTGGCTGAGGACACTTCGCGAATGCTGCTGTGAATGCGTTCGACGAAGCGGTTGAAGGCGTTGCCGAGGACACCGAAt                                                                       >  1:1885668‑M1/1‑106 (MQ=255)
                                                                                                                   cGCAGGGCCACTTCGTTGCCCTGATAGGTGGATGGGGACAATGCGCGAATGCTGCTGTGAATGCGTTCGACGAAGCGGTTGAAGGCGTTGCCGAGGACACCGAATTCGTCGTGGCTGTGGATGTGCAGGCGCTTGGTCAGGTCGCCCTCa                          <  2:612950/150‑1 (MQ=255)
                                                                                                                   cGCAGGGCCACTTCGTTGACCTGCTCGGTGGCTGAGGACACTTCGCGAATGCTGCTGTGAATGCGTTCGACGAAGCGGTTGAAGGCGTTGCCGAGGACACCGAATTCGTCGTGGCTGTGGATGTGCAGGCGCTTGGTCAGGTCGCCCTCa                          >  1:733168/1‑150 (MQ=255)
                                                                                                                        ggCCACTTCGTTGACCTGCTCGGTGGCTGAGGACACTTCGCGAATGCTGCTGTGAATGCGTTCGACGAAGCGGTTGAAGGCGTTGCCGAGGACACCGAATTCGTCGTGGCTGTGGAt                                                      <  2:1954733/117‑1 (MQ=255)
                                                                                                                        ggCCACTTCGTTGACCTGCTCGGTGGCTGAGGACACTTCGCGAATGCTGCTGTGAATGCGTTCGACGAAGCGGTTGAAGGCGTTGCCGAGGACACCGAATTCGTCGTGGCTGTGGAt                                                      >  1:1954733/1‑117 (MQ=255)
                                                                                                                         gCCACTTCGTTGACCTGCTCGGTGGCTGAGGACACTTCGCGAATGCTGCTGTGAATGCGTTCGACGAAGCGGTTGAAGGCGTTGCCGAGGACACCGAATTCGTCGTGGCTGTGGATGTGCAGGCGCTTGGTCAGGTCGCCCTCACCTTCg                    <  2:1800921/150‑1 (MQ=255)
                                                                                                                          ccACTTCGTTGACCTGCTCGGTGGCTGAGGACACTTCGCGAATGCTGCTGTGAATGCGTTCGACGAAGCGGTTGAAGGCGTTGCCGAGGACACCGAATTCGTCGTGGCTGTGGATGTGCAGGCGCTTGGTCAGGTCGCCCTCACCTTCgg                   >  1:2018611/1‑150 (MQ=255)
                                                                                                                              ttCGTTGACCTGCTCGGTGGCTGAGGACACTTCGCGAATGCTGCTGTGAATGCGTTCGACGAAGCGGTTGAAGGCGTTGCCGAGGACACCGAATTCGTCGTGGCTGTGGATGTGCAGGCGCTTGGTCAGGTCGCCCTCACCTTCGGCGAt               >  2:1751985/1‑150 (MQ=255)
                                                                                                                                  ttGACCTGCTCGGTGGCTGAGGACACTTCGCGAATGCTGCTGTGAATGCGTTCGACGAAGCGGTTGAAGGCGTTGCCGAGGACACCGAATTCGTCGTGGCTGTGGATGTGCAGGCGCTTGGTCAGGTCGCCCTCACCTTCGGCGATGTCt           >  1:296772/1‑150 (MQ=255)
                                                                                                                                    gACCTGCTCGGTGGCTGAGGACACTTCGCGAATGCTGCTGTGAATGCGTTCGACGAAGCGGTTGAAGGCGTTGCCGAGGACACCGAATTCGTCGTGGCTGTGGATGTGCAGGCGCTTGGTCAGGTCGCCCTCACCTTCGGCGATGTCTTc         <  1:941820/150‑1 (MQ=255)
                                                                                                                                     aCCTGCTCGGTGGCTGAGGACACTTCGCGAATGCTGCTGTGAATGCGTTCGACGAAGCGGTTGAAGGCGTTGCCGAGGACACCGAATTCGTCGTGGCTGTGGATGTGCAGGCGCTTGGTCAgg                                   <  1:1799381/123‑1 (MQ=255)
                                                                                                                                     aCCTGCTCGGTGGCTGAGGACACTTCGCGAATGCTGCTGTGAATGCGTTCGACGAAGCGGTTGAAGGCGTTGCCGAGGACACCGAATTCGTCGTGGCTGTGGATGTGCAGGCGCTTGGTCAgg                                   >  2:1799381/1‑123 (MQ=255)
                                                                                                                                     aCCTGCTCGGTGGCTGAGGACACTTCGCGAATGCTGCTGTGAATGCGTTCGACGAAGCGGTTGAAGGCGTTGCCGAGGACACCGAATTCGTCGTGGCTGTGGATGTGCAGGCGCTTGGTCAGGTCGCCCTCACCTTCGGCGATGTCTTcc        <  1:446250/150‑1 (MQ=255)
                                                                                                                                       cTGCTCGGTGGCTGAGGACACTTCGCGAATGCTGCTGTGAATGCGTTCGACGAAGCGGTTGAAGGCGTTGCCGAGGACACCGAATTCGTCGTGGCTGTGGATGTGCAGGCGCTTGGTCAGGTCGCCCTCACCTTCGGCGATGTCTTCCAt      >  2:305930/1‑150 (MQ=255)
                                                                                                                                         gCTCGGTGGCTGAGGACACTTCGCGAATGCTGCTGTGAATGCGTTCGACGAAGCGGTTGAAGGCGTTGCCGAGGACACCGAATTCGTCGTGGCTGTGGATGTGCAGGCGCTTGGTCAGGTCGCCCTCACCTTCGGCGATGTCTTCCATgg    >  1:2131178/1‑150 (MQ=255)
                                                                                                                                          cTCGGTGGCTGAGGACACTTCGCGAATGCTGCTGTGAATGCGTTCGACGAAGCGGTTGAAGGCGTTGCCGAGGACACCGAATTCGTCGTGGCTGTGGATGTGCAGGCGCTTGGTCAGGTCGCCCTCACCTTCGGCGATGTCTTCCATGgc   >  2:667270/1‑150 (MQ=255)
                                                                                                                                          cTCGGTGGCTGAGGACACTTCGCGAATGCTGCTGTGAATGCGTTCGACGAAGCGGTTGAAGGCGTTGCCGAGGACACCGAATTCGTCGTGGCTGTGGATGTGCAGGCGCTTGGTCAGGTCGCCCTCACCTTCGGCGATGTCTTCCATGgc   >  2:1283772/1‑150 (MQ=255)
                                                                                                                                           tCGGTGGCTGAGGACACTTCGCGAATGCTGCTGTGAATGCGTTCGACGAAGCGGTTGAAGGCGTTGCCGAGGACACCGAATTCGTCGTGGCTGTGGATGTGCAGGCGCTTGGTCAGGTCGCCCTCACCTTCGGCGATGTCTTCCATGgcg  >  1:256608/1‑150 (MQ=255)
                                                                                                                                                 |                                                                                                                                               
GCCGGCGATTTCCTGAGCCGCAGCGCCCAGTTCGTTGATGGCGGCTGCGACACTGTTGGTGCGGTTGGACTGCTCGTCGGAGTTGGTCATCGACGAGTTCGAAGCGCTGATCACCCGCAGGGCCACTTCGTTGACCTGCTCGGTGGCTGAGGACACTTCGCGAATGCTGCTGTGAATGCGTTCGACGAAGCGGTTGAAGGCGTTGCCGAGGACACCGAATTCGTCGTGGCTGTGGATGTGCAGGCGCTTGGTCAGGTCGCCCTCACCTTCGGCGATGTCTTCCATGGCG  >  NC_002947/1560933‑1561221

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.