New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1750302 =120 (1.360)7 (0.090) 7/222 NT 6.2% intergenic (‑25/‑64) PP_1549/PP_1550 Cro/CI family transcriptional regulator/Cro/CI family transcriptional regulator
?NC_002947 1750339 = 104 (1.320)intergenic (‑62/‑27) PP_1549/PP_1550 Cro/CI family transcriptional regulator/Cro/CI family transcriptional regulator

Only 100 of 136 total aligned reads displayed.

TGTTCGCGATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTG‑‑TTTTGAAT‑ATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCAT‑GACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACC  >  NC_002947/1750190‑1750483
                                                                                                                                                        |                                                                                                                                                 
tgtTCGCGATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTG‑‑TTTTGAAT‑ATGCAAGCATGCTTGaa                                                                                                                                                   <  1:575516/150‑1 (MQ=255)
tgtTCGCGATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTCGCTTGTCAAGCATGCTTG‑‑TTTTGAAT‑ATGCAAGCATGCTTGaa                                                                                                                                                   <  2:1695500/150‑1 (MQ=255)
 gtTCGCGATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTG‑‑TTTTGAAT‑ATGCAAGCATGCTTGAAt                                                                                                                                                  <  2:2047348/150‑1 (MQ=255)
    cgcgATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTG‑‑TTTTGAAT‑ATGCAAGCATGCTTGAATGcc                                                                                                                                               <  2:913750/150‑1 (MQ=255)
     gcgATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTG‑‑TTTTGAAT‑ATGCAAGCATGCTTGAATGCCt                                                                                                                                              >  2:1289751/1‑150 (MQ=255)
       gATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACTGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTG‑‑TTTTGAAT‑ATGCAAGCATGCTTGAATGCCTgg                                                                                                                                            >  1:1089616/1‑150 (MQ=255)
           gcgcgcgtGACATGGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCAGTCGCGCAATCTACAAGGTTGCTTGTTACGCATGCTTG‑‑TTTTGAAT‑ATGCAAGCATGCTTGACTGCCTGGACGa                                                                                                                                        <  2:280961/143‑1 (MQ=255)
             gcgTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTG‑‑TTTTGAAT‑ATGCAAGCATGCTTGAATGCCTGTACGAGc                                                                                                                                      >  2:1137902/1‑150 (MQ=255)
              cgTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTG‑‑TTTTGAAT‑ATGCAAGCATGCTTGAATGCCTGGACGAGCa                                                                                                                                     <  2:2186585/150‑1 (MQ=255)
               gTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTG‑‑TTTTGAAT‑ATGCAAGCATGCTTGAATGCCTGGACGAGCag                                                                                                                                    >  1:1854856/1‑150 (MQ=255)
               gTTTGACATTGCGAACGCCCAACTGCGTGTGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTG‑‑TTTTGAAT‑ATGCAAGCATGCTTGAATGCCTGGACGAGCag                                                                                                                                    >  1:652592/1‑150 (MQ=255)
                tttGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTG‑‑TTTTGAAT‑ATGCAAGCATGCTTGAATGCCTGGACGAGCaga                                                                                                                                   <  1:368702/150‑1 (MQ=255)
                      cacccctagcgccttcgccagcgctgaaatagacccgaaatgttggattgcctggctcttggtcatggcgacctcctccgctcgtccaggcattcaagcatgcctgttttgaatatgcaagcatgcttgaATGCCTGGACGAGCAgagga                                                                                                                                <  2:685094‑M2/20‑1 (MQ=255)
                      aTTGCGAACGCCGAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTTGTGTTCATTCGTGCGATCTACAAGGTTGCTTGTCAAGCATGCTTG‑‑TTTTGAAT‑ATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGt                                                                                                                             >  1:286800/1‑150 (MQ=255)
                           gAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTG‑‑TTTTGAAT‑ATGCAAGCATGCTTGAATGCCTg                                                                                                                                             <  2:1146310/129‑1 (MQ=255)
                           gAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTG‑‑TTTTGAAT‑ATGCAAGCATGCTTGAATGCCTg                                                                                                                                             >  1:1146310/1‑129 (MQ=255)
                           gAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTG‑‑TTTTGAAT‑ATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGc                                                                                                                          >  1:2223162/1‑148 (MQ=255)
                           gAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTG‑‑TTTTGAAT‑ATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCa                                                                                                                        >  2:2285529/1‑150 (MQ=255)
                             aCGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTG‑‑TTTTGAAT‑ATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCacg                                                                                                                      <  1:423741/150‑3 (MQ=255)
                              cGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTG‑‑TTTTGAAT‑ATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCAT‑Ga                                                                                                                    <  1:1384300/150‑1 (MQ=255)
                                 ccAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTG‑‑TTTTGAAT‑ATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGACGCCAT‑GACCa                                                                                                                 >  1:1061434/1‑150 (MQ=255)
                                  cAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTG‑‑TTTTGAAT‑ATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCAT‑GACCaa                                                                                                                >  2:417006/1‑150 (MQ=255)
                                   taCTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTG‑‑TTTTGAAT‑ATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCAT‑GACCAag                                                                                                               >  2:2269605/2‑150 (MQ=255)
                                    aCTGTGGGCGACTGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTG‑‑TTTTGAAT‑ATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCAT‑GACCAaga                                                                                                              <  2:1089616/150‑1 (MQ=255)
                                               cGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTATAAGGTTGCTTGTCAAGCATGCTTG‑‑TTTTGAAT‑ATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCAT‑GACCAAGAGCCAGGCAATc                                                                                                   >  1:161797/1‑150 (MQ=255)
                                                gggTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTG‑‑TTTTGAAT‑ATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCAT‑GACCAAGAGCCAGGCAATcc                                                                                                  <  2:306479/150‑1 (MQ=255)
                                                   tCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTG‑‑TTTTGAAT‑ATGCAAGCATGCTTGAATGCCT‑GACGAGCAGAGGAGGTCGCCAT‑GACCAAGAGCCAGGCAATCCAACa                                                                                              >  2:2193968/1‑150 (MQ=255)
                                                     aGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTG‑‑TTTTGAAT‑ATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCAT‑GACCAagag                                                                                                             >  1:1924936/1‑134 (MQ=255)
                                                     aGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTG‑‑TTTTGAAT‑ATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCAT‑GACCAagag                                                                                                             <  2:1924936/134‑1 (MQ=255)
                                                       gACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTGGTCAAGCATGCTTG‑‑TTTTGAAT‑ATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCAT‑GACCAAGAGCCAg                                                                                                         >  1:2002601/1‑136 (MQ=255)
                                                               tGGTGATTCGATCAGTAGTTTTCATTCGCGCACTCTACAAGGTTGCTTGTCAAGCATGCTTG‑‑TTTTGAAT‑AGGCAAACATGCTTGAATGCCTGGACGAGCAGAGGATGTCGCCAT‑GACCAAAAGCCAGGCAATCCAACATGTCGGGCCTa                                                                                   >  2:562338/1‑150 (MQ=255)
                                                                ggTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTG‑‑TTTTGAAT‑ATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCAT‑GACCAAGAGCCAGGCAATCCAACATTTCGGGTCTAt                                                                                  <  2:1854856/150‑1 (MQ=255)
                                                                 gTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTG‑‑TTTTGAAT‑ATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGGCAT‑GACCAAGAGCCAGGCAATCCGACATTTCGGGTCTAtt                                                                                 >  1:1961172/1‑150 (MQ=255)
                                                                  tGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTG‑‑TTTTGAAT‑ATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCAT‑GACCAAGAGCCAGGCAATCCAACATTTCGGGTCTAttt                                                                                >  1:1494534/1‑150 (MQ=255)
                                                                    aTTCGATCAGTAGTTTTCATTCGCGCAATCTATAAGGTTGCTTGTCAAGCATGCTTG‑‑TTTTGAAT‑ATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCAT‑GACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCa                                                                              <  2:161797/150‑1 (MQ=255)
                                                                         aTCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTG‑‑TTTTGAAT‑ATGCAAGCATGCTTGAATGCCTGGAc                                                                                                                                          <  1:919393/86‑1 (MQ=255)
                                                                            agtagtTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTG‑‑TTTTGAAT‑ATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCAT‑GACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGc                                                                      >  1:2253229/1‑150 (MQ=255)
                                                                            agtagcTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCGTG‑‑TTTTGAAT‑ATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCAT‑GACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGc                                                                      <  2:235178/150‑1 (MQ=255)
                                                                             gtagtTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTG‑‑TTTTGAAT‑ATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCAT‑GACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCg                                                                     >  1:1161950/1‑150 (MQ=255)
                                                                              tagtTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTG‑‑TTTTGAAT‑ATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCAT‑GACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGa                                                                    >  2:1861338/1‑150 (MQ=255)
                                                                                gtTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTG‑‑TTTTGAAT‑ATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCAT‑GACCAAGAGCCAgg                                                                                                        <  1:207818/112‑1 (MQ=255)
                                                                                gtTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTG‑‑TTTTGAAT‑ATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCAT‑GACCAAGAGCCAgg                                                                                                        >  2:207818/1‑112 (MQ=255)
                                                                                gtTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTG‑‑TTTTGAAT‑ATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCAT‑GACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAg                                                                  >  2:860992/1‑150 (MQ=255)
                                                                                 ttttCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTG‑‑TTTTGAAT‑ATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCAT‑GACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAgg                                                                 <  2:2001698/150‑1 (MQ=255)
                                                                                 ttttCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTG‑‑TTTTGAAT‑ATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCAT‑GACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAgg                                                                 <  1:1682247/150‑1 (MQ=255)
                                                                                       ttCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTG‑‑TTTTGAAT‑ATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCAT‑GACCaa                                                                                                                <  1:94560/97‑1 (MQ=255)
                                                                                       ttCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTG‑‑TTTTGAAT‑ATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCAT‑GACCaa                                                                                                                >  2:94560/1‑97 (MQ=255)
                                                                                       ttCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTG‑‑TTTTGAAT‑ATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCAT‑GACCAAGAGCCAg                                                                                                         >  1:2290589/1‑104 (MQ=255)
                                                                                         cgcgCAATCTACAAGGTTGCTTGTCAAGCATGCTTG‑‑TTTTGAAT‑ATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCAT‑GACCAAGCGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAggg                                                         <  1:562338/150‑1 (MQ=255)
                                                                                         cgcgCAATCTACAAGGTTGCTTGTCAAGCATGCTTG‑‑TTTTGAAT‑ATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCAT‑GACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAggg                                                         <  2:2253229/150‑1 (MQ=255)
                                                                                         cgcgCAATCTACAAGGTTGCTTGTCAAGCATGCTTG‑‑TTTTGAAT‑ATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCAT‑GACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAggg                                                         <  1:1289751/150‑1 (MQ=255)
                                                                                         cgcgCAATCTACAAGGTGGCTTGTCAAGCATGCTTG‑‑TGTTGAATCTTTCAAGTA‑ACGTGAATGCCTGGACGAGCAGAGGAGGTCGCCAT‑GACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAggg                                                         <  2:652592/150‑1 (MQ=255)
                                                                                           cgcAATCTACAAGGTTGCTTGTCAAGCATGCTTG‑‑TTTTGAAT‑ATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCAT‑GACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGt                                                       >  1:544523/1‑150 (MQ=255)
                                                                                            tcctctgctcgtccaggcatTCAAGCATGCTTGCATATTCAAA‑A‑‑CAGGCATGCTTGAATGCCTGGACGAGCGGAGGAGGTCGCCAT‑GACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCGCTGGCGAAGGCGCTAGGGGTg                                                      <  2:685094‑M1/130‑1 (MQ=255)
                                                                                              aaTCTACAAGGTTTCTTGTCAAGCATGCTTG‑‑TTTGACAT‑ATGGAAGCATGCTTGAATGCCTGGACGAGCAGAAGAGTTCGCCAT‑GACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGAc                                                    <  1:2269605/150‑1 (MQ=255)
                                                                                              aaTCTACAAGGTTGCTTGTCAAGCATGCTTG‑‑TTTTGAAT‑ATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCAT‑GACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGAc                                                    >  2:489126/1‑150 (MQ=255)
                                                                                                  tACAAGGTTGCTTGTCAAGCATGCTTG‑‑TTTTGAAT‑ATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCAT‑GACCAaga                                                                                                              >  2:1648589/1‑88 (MQ=255)
                                                                                                  tACAAGGTTGCTTGTCAAGCATGCTTG‑‑TTTTGAAT‑ATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCAT‑GACCAaga                                                                                                              <  1:1648589/88‑1 (MQ=255)
                                                                                                    cAAGGTTGCTTGTCAAGCATGCTTG‑‑TTTTGAAT‑ATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCAT‑GACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCa                                                                              >  2:635843/1‑118 (MQ=255)
                                                                                                    cAAGGTTGCTTGTCAAGCATGCTTG‑‑TTTTGAAT‑ATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCAT‑GACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCa                                                                              <  1:635843/118‑1 (MQ=255)
                                                                                                        gTTGCTTGTCAAGCATGCTTG‑‑TTTTGAAT‑ATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCAT‑GACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAg                                                           >  2:465383/1‑133 (MQ=255)
                                                                                                        gTTGCTTGTCAAGCATGCTTG‑‑TTTTGAAT‑ATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCAT‑GACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAg                                                           <  1:465383/133‑1 (MQ=255)
                                                                                                        gTTGCTTGTCAAGCATGCTTG‑‑TTTTGAAT‑ATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCAT‑GACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGcc                                          >  1:85853/1‑150 (MQ=255)
                                                                                                           gCTTGTCAAGCATGCTTG‑‑TTTTGAAT‑ATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCAT‑GACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTc                                       >  1:1434545/1‑150 (MQ=255)
                                                                                                            cTTGTCAAGCATGCTTG‑‑TTTTGAAT‑ATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCAT‑GACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTcc                                      <  2:2204973/150‑1 (MQ=255)
                                                                                                              tGTCAAGCATGCTTG‑‑TTTTGAAT‑ATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCAT‑GACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGc                                    <  2:85853/150‑1 (MQ=255)
                                                                                                               gTCAAGCATGCTTG‑‑TTTTGAAT‑ATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCAT‑GACCAAGAGc                                                                                                            >  1:106809/1‑77 (MQ=255)
                                                                                                               gTCAAGCATGCTTG‑‑TTTTGAAT‑ATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCAT‑GACCAAGAGc                                                                                                            <  2:106809/77‑1 (MQ=255)
                                                                                                                TCAAGCATGCTTG‑‑TTTTGAAT‑ATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCAT‑GACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCa                                  <  2:1232039‑M1/150‑1 (MQ=255)
                                                                                                                  aaGCATGCTTG‑‑TTATGAAT‑GTGCAAGCATGCTTGAATGCCTCGCCGGGATGCCGAGCAAACCGT‑TACCGATAGCAAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAAt                                <  1:860992/150‑1 (MQ=255)
                                                                                                                  AAGCATGCTTG‑‑TTTTGAAT‑ATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCAT‑GACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAg                                                                  >  2:1590693‑M1/1‑116 (MQ=255)
                                                                                                                  AAGCATGCTTG‑‑TTTTGAAT‑ATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCAT‑GACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAg                                                                  <  1:1590693‑M1/116‑1 (MQ=255)
                                                                                                                   tcaagcatgcttgcatattcaaaacaagcatgcttgaATGCCTGGACGAGCAGAGGAGGTCGCCa                                                                                                                        <  2:1924539‑M2/28‑1 (MQ=255)
                                                                                                                   tcaagcatgcttgcatattcaaaacaagcatgcttgaATGCCTGGACGAGCAGAGGAGGTCGCCa                                                                                                                        >  1:1924539‑M2/38‑65 (MQ=255)
                                                                                                                          ttG‑‑TTTTGAAT‑ATGCAAGCATGCTTGAATGCCTCCACGCGCCCCAG‑TGCCTCCACCAACCTACAAGCAGGGAAGCCAACAGTTCGGGTCTATTTCAGCCCTGGCTAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGAt                        >  1:43322/1‑150 (MQ=255)
                                                                                                                          TTG‑‑TTTTGAAT‑ATGCAAGCATGCTTGCATGCCTGGACGAGCAGAGGAGGTCGCGAT‑GGCCAAGCGCCAGGCAATAGAACTTTTAGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTCAGCTATGAGGCCGTCCGCAAATGGGCGGAt                        <  2:361367‑M1/150‑1 (MQ=255)
                                                                                                                            cttgcatattcaaaacaagcatgcttgaATGCCTGGACGAGCaga                                                                                                                                   <  1:1500129‑M2/17‑1 (MQ=255)
                                                                                                                            cttgcatattcaaaacaagcatgcttgaATGCCTGGACGAGCaga                                                                                                                                   >  2:1500129‑M2/29‑45 (MQ=255)
                                                                                                                               ttttGAAT‑ATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCAT‑GACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAggg                                                         >  2:1780627/1‑114 (MQ=255)
                                                                                                                               ttttGAAT‑ATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCAT‑GACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAggg                                                         <  1:1780627/114‑1 (MQ=255)
                                                                                                                               ttttGAAT‑ATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCAT‑GACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCCATTGGCGGacggc                     <  2:145645/150‑5 (MQ=255)
                                                                                                                                 ttGAAT‑ATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCAT‑GACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAggg                                                         >  2:1129543/1‑112 (MQ=255)
                                                                                                                                 ttGAAT‑ATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCAT‑GACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAggg                                                         <  1:1129543/112‑1 (MQ=255)
                                                                                                                                 ttGAAT‑ATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCAT‑GACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAg                                                           <  2:1953271/110‑1 (MQ=255)
                                                                                                                                 ttGAAT‑ATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCAT‑GACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAg                                                           >  1:1953271/1‑110 (MQ=255)
                                                                                                                                  tGAAT‑ATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCAT‑GACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGTGCTGTTGTTCCt                  <  2:1311484/150‑1 (MQ=255)
                                                                                                                                  tGAAT‑ATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCAT‑GACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCt                  <  1:417006/150‑1 (MQ=255)
                                                                                                                                    aaT‑ATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCAT‑GACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGa                >  1:675614/1‑150 (MQ=255)
                                                                                                                                          gCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCAT‑GACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGa                >  1:764603/1‑145 (MQ=255)
                                                                                                                                          gCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCAT‑GACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGa                <  2:764603/145‑1 (MQ=255)
                                                                                                                                           caagcatgcttgaATGCCTGGACGAGCAGAGGAGGTCGCCAT‑GACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCg          <  1:996203‑M2/137‑1 (MQ=255)
                                                                                                                                            aagcatgcttgaATGCCTGGACGAGCAGAGGAGGTCGCCAT‑GACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGa                                                     >  1:1942418‑M2/13‑106 (MQ=255)
                                                                                                                                            aagcatgcttgaATGCCTGGACGAGCAGAGGAGGTCGCCAT‑GACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGa                                                     <  2:1942418‑M2/94‑1 (MQ=255)
                                                                                                                                            aagcatgcttgaATGCCTGGACGAGCAGAGGAGGTCGCCAT‑GACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGc         <  2:1796707‑M2/138‑1 (MQ=255)
                                                                                                                                               catgcttgaATGCCTGGACGAGCAGAGGAGGTCGCCAT‑GACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTCTAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAg      >  1:155222‑M2/10‑150 (MQ=255)
                                                                                                                                                atgcttgaATGCCTGGACGAGCAGAGGAGGTCGCCAT‑GACTAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGt     >  2:968043‑M2/9‑150 (MQ=255)
                                                                                                                                                atgcttgaATGCCTGGACGAGCAGAGGAGGTCGCCAT‑GACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCg                           >  2:120494‑M2/9‑128 (MQ=255)
                                                                                                                                                   cttgaATGCCTGGACGAGCAGAGGAGGTCGCCAT‑GACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTAcc  >  2:1456492‑M2/6‑150 (MQ=255)
                                                                                                                                                       aATGCCTGGACGAGCAGAGGAGGTCGCCAT‑GACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATggg                             <  2:268872‑M2/118‑1 (MQ=255)
                                                                                                                                                       aATGCCTGGACGAGCAGAGGAGGTCGCCAT‑GACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATggg                             >  1:268872‑M2/2‑119 (MQ=255)
                                                                                                                                                        |                                                                                                                                                 
TGTTCGCGATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTG‑‑TTTTGAAT‑ATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCAT‑GACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACC  >  NC_002947/1750190‑1750483

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.