New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 227125651 (0.580)6 (0.080) 5/216 NT 10.6% intergenic (+34/‑186) PP_2002/PP_t31 oxidoreductase/tRNA‑Val
?NC_002947 = 2271306 57 (0.740)intergenic (+84/‑136) PP_2002/PP_t31 oxidoreductase/tRNA‑Val

CATTTGTCACCGGCCAGGAGTTTGTGGTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACAACGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAGCTTCGCCACCTGCGTAAATTTCGCGGCCTCAGCGAAGCAAACGCAACAAGCAACATCGCGAGGGTGATTAGCTC  >  NC_002947/2271158‑2271454
                                                                                                                                                    |                                                                                                                                                    
cATTTGTCACCGGCCAGGAGTTTGTGGTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACAACGGTTAATGTCCGACTGTAGGAGCGGGTTTACc                                                                                                                                                     >  1:2060742‑M2/1‑149 (MQ=255)
cATTTGTCACCGGCCAGGAGTTTGTGGTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACAACGGTTAATGTCCGACTGTAGGAGCGGGTTTACc                                                                                                                                                     >  1:611025‑M2/1‑149 (MQ=255)
  tttGTCACCGGCCAGGAGTTTGTGGTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACAACGGTTATTGTCCGACTGTAGGAGCGGGTTTACccg                                                                                                                                                   <  1:1172137‑M2/150‑4 (MQ=255)
   ttGTCACCGGCCAGGAGTTTGTGGTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACAACGGTTAATGTCCGACTGTAGGAGCGGGTTTACccgc                                                                                                                                                  >  2:1527089‑M2/1‑146 (MQ=255)
      tCACCGGCCAGGAGTTTGTGGTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACAACGGTTAATGTCCGACTGTAGGAGCGGGTTTACccgcgaa                                                                                                                                               <  2:299510‑M2/150‑8 (MQ=255)
      tCACCGGCCAGGAGTTTGTGGTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACAACGGTTAATGTCCGACTGTAGGAGCGGGTTTACccgcgaa                                                                                                                                               <  1:91125‑M2/150‑8 (MQ=255)
        aCCGGCCAGGAGTTTGTGGTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACAACGGTTAATGTCCGACTGTAGGAGCGGGTTTACccgcgaaga                                                                                                                                             <  2:1935506‑M2/150‑10 (MQ=255)
         ccGGCCAGGAGTTTGTGGTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACAACGGTTAATGTCCGACTGTAGGAGCGGGTTTACccgcgaagag                                                                                                                                            >  2:51876‑M2/1‑140 (MQ=255)
         ccGGCCAGGAGTTTGTGGTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAAACCGCTCTTACAACGGTTAATGTCCGACTGTAGGAGCGGGTTTACccgcgaagag                                                                                                                                            >  1:1572969‑M2/1‑140 (MQ=255)
           ggCCAGGAGTTTGTGGTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACAACGGTTAATGTCCGACTGTAGGAGCGGGTTTACccgcgaagaggc                                                                                                                                          >  2:2318690‑M2/1‑138 (MQ=255)
            gCCAGGAGTTTGTGGTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACAACGGTTAATGTCCGACTGTAGGAGCGGGTTTACccgcgaagaggcc                                                                                                                                         >  2:702119‑M2/1‑137 (MQ=255)
             ccAGGAGTTTGTGGTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACAACGGTTAATGTCCGACTGTAGGAGCGGGTTTACccgcgaagaggccg                                                                                                                                        >  2:1808225‑M2/1‑136 (MQ=255)
              cAGGAGTCTGTGGTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTGCTACAACGGTTAATGTCCGACTGTAGGAGCGGGTTTACccgcgaagaggccgg                                                                                                                                       <  2:1197365‑M2/150‑16 (MQ=255)
               aGGAGTTTGTGGTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACAACGGTTAATGTCCGACTGTAGGAGCGGGTTTACccgcgaagaggccggc                                                                                                                                      <  1:1521136‑M2/150‑17 (MQ=255)
                   gTTTGTGGTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACCGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACAACGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAg                                                                                                                                  >  1:163109/1‑150 (MQ=255)
                    tttGTGGTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACAACGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAgg                                                                                                                                 >  2:817673/1‑150 (MQ=255)
                    tttGTGGTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACAACGGTTAATGTACGGCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAgg                                                                                                                                 >  1:1875931/1‑150 (MQ=255)
                      tgtgGTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACAACGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCa                                                                                                                               <  1:817673/150‑1 (MQ=255)
                        tgGTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACAACGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAat                                                                                                                             >  2:1260472/1‑150 (MQ=255)
                         ggTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACAACGGTTAATGTCCGACTGTAGTAACGGGATTACCCGCCAAGAGGCCGGCACAGGCAatc                                                                                                                            >  2:2197652/1‑150 (MQ=255)
                          gTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACAACGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAatca                                                                                                                           >  2:2132542/1‑150 (MQ=255)
                           tCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACAACGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAatcac                                                                                                                          <  1:2197652/150‑1 (MQ=255)
                             gATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACAACGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAatcacat                                                                                                                        >  1:977239/1‑150 (MQ=255)
                                   ggcATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACAACGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGtt                                                                                                                  <  2:1178770/150‑1 (MQ=255)
                                        gACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACAACGGTTAATGTCCGACTGTAGGAGCGGGTTTACccgcgaagaggccg                                                                                                                                        <  2:1009846‑M2/123‑15 (MQ=255)
                                        gACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACAACGGTTAATGTCCGACTGTAGGAGCGGGTTTACccgcgaagaggccg                                                                                                                                        >  1:1009846‑M2/1‑109 (MQ=255)
                                           ccGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACAACGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCttttt                                                                                                          >  1:578795/1‑150 (MQ=255)
                                           ccGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCACCCAGCCATGAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCttttt                                                                                                          <  1:869982/150‑1 (MQ=38)
                                                  atgatCTATACCTGAGCACCTTGTTTAAACGGCGCCCGCCTCTGCGCGGCTAAACCCGCTCCTACAACGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGaaaaaa                                                                                                   <  1:1299163/150‑1 (MQ=255)
                                                         ataCCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACAACGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAAt                                                                                            >  1:906674/1‑150 (MQ=255)
                                                            ccTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACAACGGTTAATGTCCGACTGTAGGAGCGGGTTTACccgcgaa                                                                                                                                               >  2:69444‑M2/1‑89 (MQ=255)
                                                            ccTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACAACGGTTAATGTCCGACTGTAGGAGCGGGTTTACccgcgaa                                                                                                                                               <  1:69444‑M2/96‑8 (MQ=255)
                                                             cttaGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACAACGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTTCCTTTTTGAAAAAAATTCAATgggg                                                                                        >  1:1152351/4‑150 (MQ=255)
                                                             cTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACAACGGTTAATGTCCGACTGTAGGAGCGGGTTTACccgcgaagagg                                                                                                                                           >  2:627353‑M2/1‑88 (MQ=255)
                                                             cTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACAACGGTTAATGTCCGACTGTAGGAGCGGGTTTACccgcgaagagg                                                                                                                                           <  1:627353‑M2/99‑12 (MQ=255)
                                                             cTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACAACGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCAGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATgggg                                                                                        <  2:91125/150‑1 (MQ=255)
                                                              tGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACAACGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGc                                                                                       >  1:2258128/1‑150 (MQ=255)
                                                              tGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACAACGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGc                                                                                       >  1:982993/1‑150 (MQ=255)
                                                                  cACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACAACGGTTAATGTCCGACTGTAGGAGCGGGTTTAc                                                                                                                                                      <  2:1519510/83‑1 (MQ=255)
                                                                  cACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACAACGGTTAATGTCCGACTGTAGGAGCGGGTTTAc                                                                                                                                                      >  1:1519510/1‑83 (MQ=255)
                                                                  cACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACAACGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTAtt                                                                                   <  2:1521136/150‑1 (MQ=255)
                                                                     cTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACAACGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCa                                                                                              >  1:465415/1‑136 (MQ=255)
                                                                     cTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACAACGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCa                                                                                              <  2:465415/136‑1 (MQ=255)
                                                                     cTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACAACGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGAc                                                                                >  2:330899/1‑150 (MQ=255)
                                                                     cTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACAACGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGAc                                                                                >  1:1329598/1‑150 (MQ=255)
                                                                         tttAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACAACGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAg                                                                            >  1:2326030/1‑150 (MQ=255)
                                                                             aaCTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACAACGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAGCTTc                                                                        <  2:2326030/150‑1 (MQ=255)
                                                                               cTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACAACGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAGCTTCGc                                                                      <  2:977239/150‑1 (MQ=255)
                                                                                tGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACAACGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAGCTTCGcc                                                                     <  2:578795/150‑1 (MQ=255)
                                                                                       gCCTCTTCGCGGCTAAACCCGCTCCTACAACGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAGCTTCGCCACCTGCg                                                              <  2:163109/150‑1 (MQ=255)
                                                                                         ctctTCGCGGCTAAACCCGCTCCTACAACGGTTAATGTCCGACGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAGCTTCGCCACCTGCGTa                                                            >  2:2081941/1‑150 (MQ=255)
                                                                                           ctTCGCGGCTAAACCCGCTCCTACAACGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAGCTTCGCCACCTGCGTaaa                                                          <  2:982993/150‑1 (MQ=255)
                                                                                            ttCGCGGCTAAACCCGCTCCTACAACGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAGCTTCGCCACCTGCGTAAAt                                                         >  2:832318/1‑150 (MQ=255)
                                                                                            ttCGCGGCTAAACCCGCTCCTACAACGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAGCTTCGCCACCTGCGTAAAt                                                         <  1:2132542/150‑1 (MQ=255)
                                                                                            ttCGCGGCTAAACCCGCTCCTACAACGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAGCTTCGCCACCTGCGTAAAt                                                         >  1:2217195/1‑150 (MQ=255)
                                                                                                   cTAAACCCGCTCCTACAACGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAGCTTCGCCACCTGCGTAAATTTCGCgg                                                  <  1:2081941/150‑1 (MQ=255)
                                                                                                      aaCCCGCTCCTACAACGGTTAATGTCCGACTGTAGGAGCGGGTTTACccgcgaagaggccggcgcagtttaaacaaggtgctcaggtatagatcatcttgcgggtcatgccgccatcgaccacaaactcctggccggtgacaaatgccgc                                               <  1:1817615‑M2/150‑104 (MQ=255)
                                                                                                       aCCCGCTCCTACAACGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAGCTTCGCCACCTGCGTAAATTTCGCGGCCTc                                              >  1:1274837/1‑150 (MQ=255)
                                                                                                        cccGCTCCTACAACGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGtt                                                                                                                  >  1:1924481/1‑81 (MQ=255)
                                                                                                        cccGCTCCTACAACGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGtt                                                                                                                  <  2:1924481/81‑1 (MQ=255)
                                                                                                         ccGCTCCTACAACGGTTAATGTCCGACTGTAGGAGCGGGTTTACccgcgaagaggccggcgcagtttaaacaaggtgctcaggtatagatc                                                                                                       >  2:2296237‑M2/1‑44 (MQ=255)
                                                                                                         ccGCTCCTACAACGGTTAATGTCCGACTGTAGGAGCGGGTTTACccgcgaagaggccggcgcagtttaaacaaggtgctcaggtatagatc                                                                                                       <  1:2296237‑M2/91‑48 (MQ=255)
                                                                                                         ccGCTCCTACAACGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAGCTTCGCCACCTGCGTAAATTTCACGGCCTCAg                                            >  1:243197/1‑150 (MQ=255)
                                                                                                         ccGCTCCTACAACGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACATGTCCTTTTTGAAAAAAATTCACTGGGACTGTTTACGGAGCTTCGCCACCTGCGTAAATTTCGCGGCCTCAg                                            >  1:522049/1‑150 (MQ=38)
                                                                                                         ccGCTCCTACAACGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCACGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAGCTTCGCCACCTGCGTAAATTTc                                                      >  2:2107899/1‑140 (MQ=255)
                                                                                                         ccGCTCCTACAACGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCACGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAGCTTCGCCACCTGCGTAAATTTc                                                      <  1:2107899/140‑1 (MQ=255)
                                                                                                              ccTACAACGGTTAATGTCCGACTGTAGGAGCGGGTCAACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAGCTTCGCCACCTGCGTAAATTTCGCGGCCTCAGCGAAg                                       <  1:1875852/150‑1 (MQ=255)
                                                                                                                  cAACGGTTAATGTCCGACTGTAGGAGCGGGTTTAGccgcgaagaggccggcgcagtttaaacaaggtgctcaggtatagatcatcttgcgggtcatgccgccatcgaccacaaactcctggccggtgacaaatgccgcctg                                            >  1:178918‑M2/1‑35 (MQ=255)
                                                                                                                  cAACGGTTAATGTCCGACTGTAGGAGCGGGTTTAGccgcgaagaggccggcgcagtttaaacaaggtgctcaggtatagatcatcttgcgggtcatgccgccatcgaccacaaactcctggccggtgacaaatgccgcctg                                            <  2:178918‑M2/141‑107 (MQ=255)
                                                                                                                       gTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAGCTTCGCCACCTGCGTAAATTTCGCGGCCTCAGCGAAGCAAACGcaa                              <  1:973352/150‑1 (MQ=255)
                                                                                                                        ttAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAGCTTCGCCACCTGCGTAAATTTCGCGGCCTCAGCGAAGCAAACGcaac                             <  2:1172137/150‑1 (MQ=255)
                                                                                                                            tGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAGCTTCGc                                                                      >  2:133383/1‑105 (MQ=255)
                                                                                                                            tGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAGCTTCGc                                                                      <  1:133383/105‑1 (MQ=255)
                                                                                                                              tCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAGCTTCGCCACCTGCGTAAATTTCGCGGCCTCAGCGAAGCAAACGCAACAAGCaa                       >  2:128343/1‑150 (MQ=255)
                                                                                                                              tCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAGCTTCGCCACCTGCGTAAATTTCGCGGCCTCAGCGAAGCAAACGCAACAAGCaa                       >  2:57748/1‑150 (MQ=255)
                                                                                                                              tCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAGCTTCGCCACCTGCGTAAATTTCGCGGCCTCAGCGAAGCAAACGCAACAAGCaa                       <  2:1274837/150‑1 (MQ=255)
                                                                                                                                cGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAGCTTCGCCACCTGCGTAAATTTCGCGGCCTCAGCGAAGCAAACGCAACAAGCAACa                     <  2:1329598/150‑1 (MQ=255)
                                                                                                                                  aCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAGCTTCGCCACCTGCGTAAATTTCGCGGCCTCAGCGAAGCAAACGCAACAAGCAACATc                   <  2:1152351/150‑1 (MQ=255)
                                                                                                                                      tAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAGCTTCGCCACCTGCGTAAATTTCGCGGCCTCAGCGaa                                        <  1:593572/125‑1 (MQ=255)
                                                                                                                                      tAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAGCTTCGCCACCTGCGTAAATTTCGCGGCCTCAGCGaa                                        >  2:593572/1‑125 (MQ=255)
                                                                                                                                      tAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAGCTTCGCCACCTGCGTAAATTTCGCGGCCTCAGCGAAGCAAACGCAACAAGCAACATCGCGa               <  2:2258128/150‑1 (MQ=255)
                                                                                                                                      tAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGCTTCTCCTCTTAGCTTCGCCACCTGCGTAAATTTCGTGGCCTCCGCCAACCAAACCCAACAAGCAACATCGCGa               >  1:405087/1‑150 (MQ=37)
                                                                                                                                      gattagcgtGTTTATccgcgaagaggccggcgcagtttaaacaaggtgctcaggtatagatcatcttgcgggtcatgccgccatcgaccacaaactcctggccggtgacaaatgccgcctggcgtgacagcaaccaggcaaccatggccg               <  2:1844059‑M2/146‑136 (MQ=255)
                                                                                                                                         gAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAGCTTCGCCACCTGCGTAAATTTCGCGGCCTCAGCGAAGCAAACGCAACAAGCAACATCGCGa               >  1:182568/1‑147 (MQ=255)
                                                                                                                                         gAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAGCTTCGCCACCTGCGTAAATTTCGCGGCCTCAGCGAAGCAAACGCAACAAGCAACATCGCGa               <  2:182568/147‑1 (MQ=255)
                                                                                                                                         gAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAGCTTCGCCACCTGCGTAAATTTCGCGGCCTCAGCGAAGCAAACGCAACAAGCAACATCGCGAggg            >  1:771399/1‑150 (MQ=255)
                                                                                                                                           gCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAGCTTCGCCACCTGCGTAAATTTCGCGGCCTCAGCGAAGCAAACGCAACAAGCAACATCGCGAGGGTg          >  2:257732/1‑150 (MQ=255)
                                                                                                                                            cGGGTTTAGCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAGCTTCGCCACCTGCGTAAATTTCGCGGCCTCAGCGAAGCAAACGCAACAAGCAACATCGCGAGGGTGa         <  1:1436870/150‑1 (MQ=255)
                                                                                                                                                tttACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAGCTTCGCCACCTGCGTAAATTTCGCGGCCTCAGCGAAGCAAACGCAACAAGCAACATCGCGAGGGTGATTAg     <  2:1875931/150‑1 (MQ=255)
                                                                                                                                                   aCccgcgaagaggccggcgcagtttaaacaaggtgctcaggtatagatcatcttgcgggtcatgccgccatcgaccacaaactcctggccggtgacaaatgccgcctggcgtgacagcaaccaggcaaccatggccgcgacatcttccac  >  2:1817615‑M2/1‑2 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
CATTTGTCACCGGCCAGGAGTTTGTGGTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACAACGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAGCTTCGCCACCTGCGTAAATTTCGCGGCCTCAGCGAAGCAAACGCAACAAGCAACATCGCGAGGGTGATTAGCTC  >  NC_002947/2271158‑2271454

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.